FFCP PHASE1:Hg19::chr10:107729902..107729912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:107729902..107729912,- | |||
|description=CAGE_peak_at_chr10:107729902..107729912,- | |description=CAGE_peak_at_chr10:107729902..107729912,- | ||
|id=chr10:107729902..107729912,- | |id=chr10:107729902..107729912,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.60e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-10,24;CL:0000826,1.98e-10,24 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.49e-08;3!UBERON:0003057;2.49e-08;3 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.31e-07;1!DOID:0070004;3.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.32e-07,1;DOID:0070004,3.32e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.82e-24!57;UBERON:0005068!9.82e-24!57;UBERON:0006241!9.82e-24!57;UBERON:0007135!9.82e-24!57;UBERON:0002616!1.18e-20!59;UBERON:0001017!1.84e-18!82;UBERON:0000955!3.09e-18!69;UBERON:0006238!3.09e-18!69;UBERON:0002020!9.51e-18!34;UBERON:0003528!9.51e-18!34;UBERON:0001893!1.34e-17!34;UBERON:0002346!1.61e-17!90;UBERON:0005743!4.42e-17!86;UBERON:0000073!1.15e-16!94;UBERON:0001016!1.15e-16!94;UBERON:0002791!1.20e-16!33;UBERON:0002780!1.32e-16!41;UBERON:0001890!1.32e-16!41;UBERON:0006240!1.32e-16!41;UBERON:0003080!4.79e-16!42;UBERON:0001869!1.78e-15!32;UBERON:0003075!3.60e-15!86;UBERON:0007284!3.60e-15!86;UBERON:0007023!1.01e-13!115;UBERON:0000924!5.94e-11!173;UBERON:0006601!5.94e-11!173;UBERON:0002308!1.16e-10!9;UBERON:0000125!1.16e-10!9;UBERON:0002619!4.74e-10!22;UBERON:0000956!7.52e-10!25;UBERON:0000203!7.52e-10!25;UBERON:0003056!8.70e-10!61;UBERON:0000153!1.40e-09!129;UBERON:0007811!1.40e-09!129;UBERON:0001950!1.57e-09!20;UBERON:0004121!2.12e-09!169;UBERON:0000033!2.95e-09!123;UBERON:0002298!3.06e-09!8;UBERON:0003076!4.58e-09!15;UBERON:0003057!4.58e-09!15;UBERON:0002420!1.76e-08!9;UBERON:0007245!1.76e-08!9;UBERON:0010009!1.76e-08!9;UBERON:0010011!1.76e-08!9;UBERON:0000454!1.76e-08!9;UBERON:0009663!2.50e-08!7;UBERON:0004733!3.25e-07!12;UBERON:0002028!3.25e-07!12;UBERON:0007277!3.25e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.89e-12;7!UBERON:0001875;1.06e-11;2!UBERON:0006514;1.06e-11;2!UBERON:0002420;1.03e-09;9!UBERON:0000125;1.03e-09;9!UBERON:0007245;1.03e-09;9!UBERON:0002308;1.03e-09;9!UBERON:0010009;1.03e-09;9!UBERON:0010011;1.03e-09;9!UBERON:0000454;1.03e-09;9!UBERON:0002240;2.49e-08;3!UBERON:0005174;2.49e-08;3!UBERON:0001137;2.49e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.50e-12,7;UBERON:0001875,1.19e-11,2;UBERON:0006514,1.19e-11,2;UBERON:0002420,1.28e-09,9;UBERON:0000125,1.28e-09,9;UBERON:0007245,1.28e-09,9;UBERON:0002308,1.28e-09,9;UBERON:0010009,1.28e-09,9;UBERON:0010011,1.28e-09,9;UBERON:0000454,1.28e-09,9;UBERON:0001049,2.77e-09,56;UBERON:0005068,2.77e-09,56;UBERON:0006241,2.77e-09,56;UBERON:0007135,2.77e-09,56;UBERON:0002240,1.97e-08,3;UBERON:0005174,1.97e-08,3;UBERON:0001137,1.97e-08,3;UBERON:0001016,3.51e-07,89;UBERON:0002791,6.03e-07,32;UBERON:0002780,7.03e-07,41;UBERON:0001890,7.03e-07,41;UBERON:0003080,7.03e-07,41;UBERON:0006240,7.03e-07,41;UBERON:0001874,8.27e-07,1 | |||
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| ||
|short_description=p@chr10:107729902..107729912,- | |short_description=p@chr10:107729902..107729912,- | ||
}} | }} |
Latest revision as of 10:11, 23 July 2015
Short description: | p@chr10:107729902..107729912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:107729902..107729912, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.98e-10 | 24 |
pro-B cell | 1.98e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 2.50e-12 | 7 |
globus pallidus | 1.19e-11 | 2 |
pallidum | 1.19e-11 | 2 |
basal ganglion | 1.28e-09 | 9 |
neural nucleus | 1.28e-09 | 9 |
nuclear complex of neuraxis | 1.28e-09 | 9 |
nucleus of brain | 1.28e-09 | 9 |
aggregate regional part of brain | 1.28e-09 | 9 |
collection of basal ganglia | 1.28e-09 | 9 |
cerebral subcortex | 1.28e-09 | 9 |
neural tube | 2.77e-09 | 56 |
neural rod | 2.77e-09 | 56 |
future spinal cord | 2.77e-09 | 56 |
neural keel | 2.77e-09 | 56 |
spinal cord | 1.97e-08 | 3 |
dorsal region element | 1.97e-08 | 3 |
dorsum | 1.97e-08 | 3 |
nervous system | 3.51e-07 | 89 |
regional part of telencephalon | 6.03e-07 | 32 |
regional part of forebrain | 7.03e-07 | 41 |
forebrain | 7.03e-07 | 41 |
anterior neural tube | 7.03e-07 | 41 |
future forebrain | 7.03e-07 | 41 |
putamen | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.32e-07 | 1 |
myeloma | 3.32e-07 | 1 |