FFCP PHASE1:Hg19::chr10:111886180..111886216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:111886180..111886216,+ | |||
|description=CAGE_peak_at_chr10:111886180..111886216,+ | |description=CAGE_peak_at_chr10:111886180..111886216,+ | ||
|id=chr10:111886180..111886216,+ | |id=chr10:111886180..111886216,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.14e-09;3!CL:0002127;5.28e-07;1!CL:0000911;5.28e-07;1!CL:0000814;5.28e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.69e-09,3;CL:0002127,6.49e-07,1;CL:0000914,6.49e-07,1;CL:0000911,6.49e-07,1;CL:0000814,6.49e-07,1;CL:0002042,6.49e-07,1;CL:0002039,6.49e-07,1;CL:0002040,6.49e-07,1;CL:0002041,6.49e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;5.28e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.33e-07!34;UBERON:0003528!8.33e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.11e-13;6!UBERON:0001876;2.41e-12;2!UBERON:0002619;1.76e-11;22!UBERON:0000349;8.45e-11;5!UBERON:0000956;4.69e-10;25!UBERON:0000203;4.69e-10;25!UBERON:0002791;6.77e-10;32!UBERON:0001950;1.94e-09;20!UBERON:0001893;4.38e-08;34!UBERON:0001869;5.60e-08;32!UBERON:0002079;1.85e-07;1!UBERON:0003528;3.82e-07;34!UBERON:0002020;3.82e-07;34!UBERON:0002038;5.28e-07;1!UBERON:0009661;5.28e-07;1!UBERON:0002950;5.28e-07;1!UBERON:0001891;5.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.08e-14,6;UBERON:0001876,1.21e-12,2;UBERON:0002619,1.05e-11,22;UBERON:0000349,4.22e-11,5;UBERON:0000956,2.98e-10,25;UBERON:0000203,2.98e-10,25;UBERON:0002791,4.04e-10,32;UBERON:0001950,1.36e-09,20;UBERON:0003528,1.79e-09,34;UBERON:0002020,1.79e-09,34;UBERON:0001893,1.79e-09,34;UBERON:0001049,2.16e-08,56;UBERON:0005068,2.16e-08,56;UBERON:0006241,2.16e-08,56;UBERON:0007135,2.16e-08,56;UBERON:0001869,6.94e-08,32;UBERON:0002780,1.07e-07,41;UBERON:0001890,1.07e-07,41;UBERON:0003080,1.07e-07,41;UBERON:0006240,1.07e-07,41;UBERON:0002079,2.23e-07,1;UBERON:0000073,3.41e-07,53;UBERON:0002616,3.41e-07,53 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.290796477559129,0.755751887377619,0,0,0,0,0.575384784644301,0,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.983548850569165,0.393010762749165,1.43921049299656,0.167186495390678,0,0.473447805734733,0,0.891283655081389,0.294605907474837,0.443067789167242,0.270803863765016,0.25618263945135,0.260118695119756,0.986627427622057,0.552700035571697,0.579606171470105,0.444859689486181,0.267540828089713,1.04535523804977,0.339928028092699,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0.490385709340376,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,0,0.741800787835671,0,0,0,0.500474079487857,0,0,1.22595118319608,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0.184099797284599,0.646584227275248,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,1.26160425437814,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,1.2329365839288,0.197030760201927,0.646882724578552,0.128343036279748,0,1.30139853857622,0,0,0,2.24702107184155,2.99161459204025,0,0.24538298343828,0,0.813795071099207,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,1.12597744800525,0,0,0.177561725313127,0,0.519254429183621,0.232420756919918,0.241718899183244,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,2.84823593587081,0.238231775457789,0,0,0,0.79312517629427,0,0,0.735120647943095,0.371606350251437,0.144269212976445,0.284567373393656,0.797131363644112,0.59873811429845,0.191505370132367,0.423347165447766,0.324621940274555,1.68478306868075,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.403599414382095,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.71623345421307,0.593929361665277,0.614321404198464,1.9882952955326,1.26602474769461,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.60298219312704,0,0.331737779793674,0,0.658156191461918,0,0,0.153900517007594,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,2.41981432097328,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0,1.38847790668105,0,0,0.873633341210151,0.171986032471617,0,0.146178634172371,0.246346371159628,0,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0.3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| ||
|short_description=p@chr10:111886180..111886216,+ | |short_description=p@chr10:111886180..111886216,+ | ||
}} | }} |
Latest revision as of 10:19, 23 July 2015
Short description: | p@chr10:111886180..111886216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:111886180..111886216, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.69e-09 | 3 |
innate effector T cell | 6.49e-07 | 1 |
immature NK T cell | 6.49e-07 | 1 |
effector T cell | 6.49e-07 | 1 |
mature NK T cell | 6.49e-07 | 1 |
immature NK T cell stage IV | 6.49e-07 | 1 |
immature NK T cell stage I | 6.49e-07 | 1 |
immature NK T cell stage II | 6.49e-07 | 1 |
immature NK T cell stage III | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.08e-14 | 6 |
amygdala | 1.21e-12 | 2 |
regional part of cerebral cortex | 1.05e-11 | 22 |
limbic system | 4.22e-11 | 5 |
cerebral cortex | 2.98e-10 | 25 |
pallium | 2.98e-10 | 25 |
regional part of telencephalon | 4.04e-10 | 32 |
neocortex | 1.36e-09 | 20 |
brain grey matter | 1.79e-09 | 34 |
gray matter | 1.79e-09 | 34 |
telencephalon | 1.79e-09 | 34 |
neural tube | 2.16e-08 | 56 |
neural rod | 2.16e-08 | 56 |
future spinal cord | 2.16e-08 | 56 |
neural keel | 2.16e-08 | 56 |
cerebral hemisphere | 6.94e-08 | 32 |
regional part of forebrain | 1.07e-07 | 41 |
forebrain | 1.07e-07 | 41 |
anterior neural tube | 1.07e-07 | 41 |
future forebrain | 1.07e-07 | 41 |
left cardiac atrium | 2.23e-07 | 1 |
regional part of nervous system | 3.41e-07 | 53 |
regional part of brain | 3.41e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-07 | 1 |