FFCP PHASE1:Mm9::chr16:41020249..41020255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:41020249..41020255,+ | |||
|description=CAGE_peak_at_chr16:41020249..41020255,+ | |description=CAGE_peak_at_chr16:41020249..41020255,+ | ||
|id=chr16:41020249..41020255,+ | |id=chr16:41020249..41020255,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.39e-09,3;CL:0000117,9.38e-07,23;CL:0000337,9.38e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.37e-16!71;UBERON:0003075!8.37e-16!71;UBERON:0007284!8.37e-16!71;UBERON:0000033!9.64e-16!63;UBERON:0004121!5.27e-13!102;UBERON:0000924!5.27e-13!102;UBERON:0006601!5.27e-13!102;UBERON:0001017!7.17e-13!73;UBERON:0005743!7.17e-13!73;UBERON:0000955!3.00e-12!50;UBERON:0006238!3.00e-12!50;UBERON:0001049!3.13e-12!52;UBERON:0005068!3.13e-12!52;UBERON:0006241!3.13e-12!52;UBERON:0007135!3.13e-12!52;UBERON:0000073!3.82e-12!75;UBERON:0001016!3.82e-12!75;UBERON:0002616!1.36e-11!49;UBERON:0003056!4.00e-11!49;UBERON:0007811!8.16e-09!86;UBERON:0003080!1.02e-07!40;UBERON:0002020!1.12e-07!34;UBERON:0000153!1.25e-07!94;UBERON:0002780!4.92e-07!39;UBERON:0001890!4.92e-07!39;UBERON:0006240!4.92e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-15,54;UBERON:0001017,2.66e-13,73;UBERON:0001016,6.55e-13,75;UBERON:0001049,4.66e-11,52;UBERON:0005068,4.66e-11,52;UBERON:0006241,4.66e-11,52;UBERON:0007135,4.66e-11,52;UBERON:0002616,3.25e-10,46;UBERON:0000955,5.63e-10,47;UBERON:0006238,5.63e-10,47;UBERON:0004121,6.89e-10,95;UBERON:0000924,6.89e-10,95;UBERON:0006601,6.89e-10,95;UBERON:0004684,2.39e-09,3;UBERON:0002275,2.39e-09,3;UBERON:0002346,9.05e-09,64;UBERON:0003075,9.05e-09,64;UBERON:0007284,9.05e-09,64;UBERON:0002259,5.41e-08,1;UBERON:0002314,5.41e-08,1;UBERON:0004061,5.41e-08,1;UBERON:0006777,5.41e-08,1;UBERON:0005882,5.41e-08,1;UBERON:0001851,1.14e-07,1;UBERON:0005889,1.14e-07,1;UBERON:0010371,1.53e-07,73;UBERON:0003080,3.41e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5869729378161,0,0,0,0,0,0,0,0,0.311068836925433,0,0.420649922702764,1.14260393761521,0,0.122490799214954,0,0,2.20231761998777,0.766124028511126,1.0752457327937,0.131886287730194,0,1.04182674111352,0.558365998002762,0,0.916789486660861,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0.969750506270444,0,1.46390398505774,0.628340120440365,0,0,0,0,2.24685959107234,1.37250180845588,0.879580464790051,0.869121600961382,1.27857728665165,0.83115217823824,1.1356888414743,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.640568601424249,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0.94652465824877,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0,0,1.20297227640581,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0.505394423527595,0.50695859978048,0.754505365544305,0.280924522409647,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0.0985044823755635,0.409231043169689,0.77468420592983,0.578719832943424,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5869729378161,0,0,0,0,0,0,0,0,0.311068836925433,0,0.420649922702764,1.14260393761521,0,0.122490799214954,0,0,2.20231761998777,0.766124028511126,1.0752457327937,0.131886287730194,0,1.04182674111352,0.558365998002762,0,0.916789486660861,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0.969750506270444,0,1.46390398505774,0.628340120440365,0,0,0,0,2.24685959107234,1.37250180845588,0.879580464790051,0.869121600961382,1.27857728665165,0.83115217823824,1.1356888414743,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.640568601424249,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0.94652465824877,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0,0,1.20297227640581,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0.505394423527595,0.50695859978048,0.754505365544305,0.280924522409647,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0,0.588795680537589,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.593175090620871,0.0985044823755635,0.409231043169689,0.77468420592983,0.578719832943424,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr16:41020249..41020255,+ | |short_description=p@chr16:41020249..41020255,+ | ||
}} | }} |
Latest revision as of 10:40, 6 August 2015
Short description: | p@chr16:41020249..41020255, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:41020249..41020255, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.39e-09 | 3 |
CNS neuron (sensu Vertebrata) | 9.38e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.38e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.55e-15 | 54 |
central nervous system | 2.66e-13 | 73 |
nervous system | 6.55e-13 | 75 |
neural tube | 4.66e-11 | 52 |
neural rod | 4.66e-11 | 52 |
future spinal cord | 4.66e-11 | 52 |
neural keel | 4.66e-11 | 52 |
regional part of brain | 3.25e-10 | 46 |
brain | 5.63e-10 | 47 |
future brain | 5.63e-10 | 47 |
ectoderm-derived structure | 6.89e-10 | 95 |
ectoderm | 6.89e-10 | 95 |
presumptive ectoderm | 6.89e-10 | 95 |
raphe nuclei | 2.39e-09 | 3 |
reticular formation | 2.39e-09 | 3 |
neurectoderm | 9.05e-09 | 64 |
neural plate | 9.05e-09 | 64 |
presumptive neural plate | 9.05e-09 | 64 |
corpora quadrigemina | 5.41e-08 | 1 |
midbrain tectum | 5.41e-08 | 1 |
neural tube mantle layer | 5.41e-08 | 1 |
tectal plate | 5.41e-08 | 1 |
neural tube alar plate | 5.41e-08 | 1 |
cortex | 1.14e-07 | 1 |
zygote cortex | 1.14e-07 | 1 |
ecto-epithelium | 1.53e-07 | 73 |
anterior neural tube | 3.41e-07 | 40 |