FFCP PHASE1:Mm9::chr12:50485922..50485933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15228 | |EntrezGene=15228 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=E9PYS1,Q8C9D9 | |UniProt=E9PYS1,Q8C9D9 | ||
|association_with_transcript=-227bp_to_ENSMUST00000110746,uc007nmg.1_5end | |association_with_transcript=-227bp_to_ENSMUST00000110746,uc007nmg.1_5end | ||
|cluster_id=chr12:50485922..50485933,+ | |||
|description=CAGE_peak_11_at_Foxg1_5end | |description=CAGE_peak_11_at_Foxg1_5end | ||
|id=chr12:50485922..50485933,+ | |id=chr12:50485922..50485933,+ | ||
|ontology_enrichment_celltype=CL:0002609!2.25e-15!6;CL:0000128!1.33e-09!6;CL:0000126!1.33e-09!6;CL:0000127!1.33e-09!6;CL:0002603!4.17e-08!2;CL:0002604!6.69e-08!2;CL:0002605!6.69e-08!2;CL:0002453!3.31e-07!8 | |ontology_enrichment_celltype=CL:0002609!2.25e-15!6;CL:0000128!1.33e-09!6;CL:0000126!1.33e-09!6;CL:0000127!1.33e-09!6;CL:0002603!4.17e-08!2;CL:0002604!6.69e-08!2;CL:0002605!6.69e-08!2;CL:0002453!3.31e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.34e-47,6;CL:0000117,7.48e-13,23;CL:0000337,7.48e-13,23;CL:0000540,3.70e-09,33;CL:0000047,3.70e-09,33;CL:0000031,3.70e-09,33;CL:0000404,3.70e-09,33;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39;CL:0002319,3.65e-07,43;CL:0002608,4.17e-07,3;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001954!1.83e-17!7;UBERON:0003022!1.83e-17!7;UBERON:0002421!1.83e-17!7;UBERON:0000349!1.83e-17!7;UBERON:0002600!1.83e-17!7;UBERON:0000956!2.61e-15!21;UBERON:0001869!2.61e-15!21;UBERON:0000203!2.61e-15!21;UBERON:0002616!4.12e-15!49;UBERON:0000955!9.60e-15!50;UBERON:0006238!9.60e-15!50;UBERON:0002791!7.30e-13!29;UBERON:0003528!7.30e-13!29;UBERON:0001893!7.30e-13!29;UBERON:0002780!9.94e-13!39;UBERON:0001890!9.94e-13!39;UBERON:0006240!9.94e-13!39;UBERON:0003080!2.40e-12!40;UBERON:0001049!2.78e-12!52;UBERON:0005068!2.78e-12!52;UBERON:0006241!2.78e-12!52;UBERON:0007135!2.78e-12!52;UBERON:0000033!4.98e-11!63;UBERON:0007811!1.02e-10!86;UBERON:0002020!1.16e-10!34;UBERON:0003056!1.33e-09!49;UBERON:0000153!1.76e-09!94;UBERON:0002619!2.94e-09!17;UBERON:0001017!4.50e-09!73;UBERON:0005743!4.50e-09!73;UBERON:0000073!9.57e-09!75;UBERON:0001016!9.57e-09!75;UBERON:0002346!3.51e-08!71;UBERON:0003075!3.51e-08!71;UBERON:0007284!3.51e-08!71;UBERON:0000064!8.95e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28117147078651,2.29510095163874,1.05162480675691,0,0,0.61245399607477,1.72521847832825,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28117147078651,2.29510095163874,1.05162480675691,0,0,0.61245399607477,1.72521847832825,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@Foxg1 | |short_description=p11@Foxg1 | ||
}} | }} |
Latest revision as of 15:36, 26 September 2015
Short description: | p11@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -227bp_to_ENSMUST00000110746, uc007nmg.1_5end |
EntrezGene: | Foxg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.34e-47 | 6 |
CNS neuron (sensu Vertebrata) | 7.48e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.48e-13 | 23 |
neuron | 3.70e-09 | 33 |
neuronal stem cell | 3.70e-09 | 33 |
neuroblast | 3.70e-09 | 33 |
electrically signaling cell | 3.70e-09 | 33 |
electrically responsive cell | 7.68e-08 | 39 |
electrically active cell | 7.68e-08 | 39 |
neural cell | 3.65e-07 | 43 |
hippocampal neuron | 4.17e-07 | 3 |
ectodermal cell | 5.16e-07 | 44 |
neurectodermal cell | 5.16e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |