FFCP PHASE1:Mm9::chr2:38142867..38142914,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227801 | |EntrezGene=227801 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WJG6,E9Q596,Q8K382,D6RHL0,D6RI65,D6RH88,E9PZT3 | |UniProt=F8WJG6,E9Q596,Q8K382,D6RHL0,D6RI65,D6RH88,E9PZT3 | ||
|association_with_transcript=0bp_to_ENSMUST00000040406,ENSMUST00000090997,ENSMUST00000102787,ENSMUST00000140552,ENSMUST00000143095,ENSMUST00000150896,ENSMUST00000171230,NM_146122,uc008jng.2,uc008jnh.2,uc008jni.2_5end | |association_with_transcript=0bp_to_ENSMUST00000040406,ENSMUST00000090997,ENSMUST00000102787,ENSMUST00000140552,ENSMUST00000143095,ENSMUST00000150896,ENSMUST00000171230,NM_146122,uc008jng.2,uc008jnh.2,uc008jni.2_5end | ||
|cluster_id=chr2:38142867..38142914,- | |||
|description=CAGE_peak_1_at_Dennd1a_5end | |description=CAGE_peak_1_at_Dennd1a_5end | ||
|id=chr2:38142867..38142914,- | |id=chr2:38142867..38142914,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.14e-12!94;UBERON:0000033!7.92e-12!63;UBERON:0007811!8.18e-11!86;UBERON:0003056!1.65e-09!49;UBERON:0000468!4.43e-09!333;UBERON:0000955!5.41e-09!50;UBERON:0006238!5.41e-09!50;UBERON:0001049!1.15e-08!52;UBERON:0005068!1.15e-08!52;UBERON:0006241!1.15e-08!52;UBERON:0007135!1.15e-08!52;UBERON:0002346!1.29e-08!71;UBERON:0003075!1.29e-08!71;UBERON:0007284!1.29e-08!71;UBERON:0002616!1.75e-08!49;UBERON:0004121!2.87e-08!102;UBERON:0000924!2.87e-08!102;UBERON:0006601!2.87e-08!102;UBERON:0000922!1.11e-07!328;UBERON:0000475!6.63e-07!200;UBERON:0003080!7.51e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.83e-11,73;UBERON:0002346,7.01e-10,64;UBERON:0003075,7.01e-10,64;UBERON:0007284,7.01e-10,64;UBERON:0003056,1.64e-09,49;UBERON:0004121,3.84e-09,95;UBERON:0000924,3.84e-09,95;UBERON:0006601,3.84e-09,95;UBERON:0000073,6.77e-09,54;UBERON:0001049,1.15e-08,52;UBERON:0005068,1.15e-08,52;UBERON:0006241,1.15e-08,52;UBERON:0007135,1.15e-08,52;UBERON:0000955,2.57e-08,47;UBERON:0006238,2.57e-08,47;UBERON:0010314,2.79e-08,92;UBERON:0002616,8.14e-08,46;UBERON:0003080,7.51e-07,40 | |||
|phase1_expression=17.135926640213,1.39590163055744,1.81999695755814,3.93203474698879,2.00358291978539,1.6787927191189,1.63528848416868,9.16775596435192,6.89864738543167,3.97909694747389,5.30775701499065,8.45584885350566,12.3264525550468,12.9382195580116,19.3203661853084,24.4995073541689,18.1886088313318,18.1390745080987,22.2125382441297,20.3707032863054,21.5159524082207,6.056748023254,4.70159620450084,0.95995453676044,1.60586496747019,1.14846392823004,0.86152399231815,0.430942465371778,1.52018735565099,2.77233142735924,0.886922042621219,12.7006134691926,18.4519436275371,0,4.04392267651784,1.99481574430191,3.47087905646027,8.37063261473815,9.37602413428561,7.85285615960697,5.29408339227913,8.87959130445979,6.79714494243615,10.7012295279241,10.0363161907319,10.8292583775392,14.8654355426127,8.50298109883741,11.2039953194581,17.1098311185369,8.11921245427103,7.18762821824858,17.9527388481778,17.4086914082723,14.7881271622684,5.40244815675489,9.74213695791773,7.21940929188419,20.8385954685386,19.0436752537932,22.1840991227163,4.06613438482959,9.78224275722253,31.9464399634897,27.6882581518753,25.5772841380596,18.5752068521411,13.831858991576,18.0419925416751,14.9856591548177,12.8298226424343,18.2816630018434,20.5407743085001,11.0241719293459,14.185129710699,15.6267193723704,22.0231761998777,26.558966321719,23.6554061214615,18.2003077067668,24.5186884854458,18.2319679694866,21.217907924105,25.8870800614573,30.2540530598084,23.8649154233671,23.7760706934502,20.1311401491325,6.20954785332109,9.3708734532414,16.8121403446973,12.9063581547208,0,4.31762553310254,2.59910566979068,4.48026887097336,10.3928870897496,10.3962496772615,7.01422212427746,4.59341446863442,15.3519327556582,16.6824420638613,30.5766287647975,28.4426681261332,1.73192832808971,1.26679932737549,1.51657333504435,8.22123933977232,38.5817446634286,28.5008907004464,14.3992821215893,14.0054120023585,13.3756988408514,13.1128697280782,15.6392980490487,14.8286577769017,48.6974086436717,25.1602881040646,32.7305904221453,18.9267214438469,22.7466764014205,16.4857586065976,11.1835056730873,36.8903804234549,40.8421078286237,7.91916871146633,7.78798309288482,8.99854096490112,6.60765180779936,39.8443100816828,42.0900554593136,23.4973638451056,41.1963638855695,41.6816195448439,27.4280218818619,39.4246269254651,16.7016556714519,21.1491850037158,10.3616330957807,27.988766832901,23.4216797332867,15.8632452059096,19.6267721487831,27.1268672104287,33.8141400782099,33.9501358754852,30.7341656555911,44.7556831378497,18.5388473922244,22.6927296201383,27.0964731212481,14.9053098050751,23.9120634334014,21.9398864908965,21.812906459242,17.5150154800274,9.83098462238529,9.52187256324446,14.7765019685708,14.2916783049496,14.0715635988658,15.3052752241863,17.0456209621351,19.0861304794982,21.7516629171203,19.5328513590343,20.3887785063711,24.1704258700041,24.3548577871951,20.685100473966,23.3478171492064,25.2925978245825,27.2242142960903,28.4517607771988,44.3711791470309,29.0191006909582,6.60837565967596,3.96675849995316,16.2099070406778,23.4559038579043,15.8506977426175,12.3026950020239,7.78323153457046,9.3210556795154,1.42358718463353,7.74085087202851,11.0587491872119,9.94782360205754,11.6978452271472,3.59527763461689,3.8904848977445,8.16479220342906,8.15571974098251,17.0230283788496,19.1603150644237,17.3103628668517,16.8738663835834,15.0090654565282,20.5518745653836,15.4990655378582,19.4678422523305,15.7948369819905,6.52195779591728,23.6920050116854,23.3905204184712,21.8116249013308,19.6774317746848,18.8118184606885,13.2405442926338,13.5217184601881,11.5116011010275,15.3754391385326,24.4405951096503,13.7692150637346,16.2259590019572,8.5876818502018,8.07288360848605,13.5084185981743,21.8008764396594,11.5589761179996,18.903937267275,14.0888421193406,15.2548661387526,20.7707759227852,24.5184950112594,19.5133647857799,24.9063527687782,19.9318220683897,27.2667654404303,26.0542670398023,24.3485824430913,22.1313059629713,36.1899081454253,15.7732648307426,16.2282210096282,15.7283945393698,28.2569038378514,29.8889800810118,12.131185957874,22.9748543755979,7.57219726599016,8.19921363022941,13.3562506594335,10.0366895140072,14.704712489438,18.1168979704853,12.5491317519217,8.18316402151673,12.6492088942888,39.8438432363041,30.3751782345695,14.6013795007149,18.8948872850148,36.6233672999029,7.96470830039777,13.595715624679,13.9068836203785,9.9960692270626,9.7449624650655,18.1386737286917,13.9551278310839,18.5402202033528,17.1118741624666,18.3301319602773,15.8127912862498,23.721174947083,35.0652793926402,20.3469036255381,12.6771510107099,21.005029433096,25.7143338781297,21.9393645650547,25.9987452551351,20.7036165397928,7.27482294997502,20.5477108737906,19.1859706307817,25.5573692059294,27.4489525383039,26.8392515930294,23.2776070806116,32.8281799490123,10.7847909553045,30.5951748317341,23.9219233116994,15.2726282292785,20.556592538038,26.5599524376614,30.2094243263466,24.936820879511,12.2384469595576,12.5956307091292,10.0885980877229,8.59203556213602,16.449471666219,16.4688768372747,15.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| |phase1_expression=17.135926640213,1.39590163055744,1.81999695755814,3.93203474698879,2.00358291978539,1.6787927191189,1.63528848416868,9.16775596435192,6.89864738543167,3.97909694747389,5.30775701499065,8.45584885350566,12.3264525550468,12.9382195580116,19.3203661853084,24.4995073541689,18.1886088313318,18.1390745080987,22.2125382441297,20.3707032863054,21.5159524082207,6.056748023254,4.70159620450084,0.95995453676044,1.60586496747019,1.14846392823004,0.86152399231815,0.430942465371778,1.52018735565099,2.77233142735924,0.886922042621219,12.7006134691926,18.4519436275371,0,4.04392267651784,1.99481574430191,3.47087905646027,8.37063261473815,9.37602413428561,7.85285615960697,5.29408339227913,8.87959130445979,6.79714494243615,10.7012295279241,10.0363161907319,10.8292583775392,14.8654355426127,8.50298109883741,11.2039953194581,17.1098311185369,8.11921245427103,7.18762821824858,17.9527388481778,17.4086914082723,14.7881271622684,5.40244815675489,9.74213695791773,7.21940929188419,20.8385954685386,19.0436752537932,22.1840991227163,4.06613438482959,9.78224275722253,31.9464399634897,27.6882581518753,25.5772841380596,18.5752068521411,13.831858991576,18.0419925416751,14.9856591548177,12.8298226424343,18.2816630018434,20.5407743085001,11.0241719293459,14.185129710699,15.6267193723704,22.0231761998777,26.558966321719,23.6554061214615,18.2003077067668,24.5186884854458,18.2319679694866,21.217907924105,25.8870800614573,30.2540530598084,23.8649154233671,23.7760706934502,20.1311401491325,6.20954785332109,9.3708734532414,16.8121403446973,12.9063581547208,0,4.31762553310254,2.59910566979068,4.48026887097336,10.3928870897496,10.3962496772615,7.01422212427746,4.59341446863442,15.3519327556582,16.6824420638613,30.5766287647975,28.4426681261332,1.73192832808971,1.26679932737549,1.51657333504435,8.22123933977232,38.5817446634286,28.5008907004464,14.3992821215893,14.0054120023585,13.3756988408514,13.1128697280782,15.6392980490487,14.8286577769017,48.6974086436717,25.1602881040646,32.7305904221453,18.9267214438469,22.7466764014205,16.4857586065976,11.1835056730873,36.8903804234549,40.8421078286237,7.91916871146633,7.78798309288482,8.99854096490112,6.60765180779936,39.8443100816828,42.0900554593136,23.4973638451056,41.1963638855695,41.6816195448439,27.4280218818619,39.4246269254651,16.7016556714519,21.1491850037158,10.3616330957807,27.988766832901,23.4216797332867,15.8632452059096,19.6267721487831,27.1268672104287,33.8141400782099,33.9501358754852,30.7341656555911,44.7556831378497,18.5388473922244,22.6927296201383,27.0964731212481,14.9053098050751,23.9120634334014,21.9398864908965,21.812906459242,17.5150154800274,9.83098462238529,9.52187256324446,14.7765019685708,14.2916783049496,14.0715635988658,15.3052752241863,17.0456209621351,19.0861304794982,21.7516629171203,19.5328513590343,20.3887785063711,24.1704258700041,24.3548577871951,20.685100473966,23.3478171492064,25.2925978245825,27.2242142960903,28.4517607771988,44.3711791470309,29.0191006909582,6.60837565967596,3.96675849995316,16.2099070406778,23.4559038579043,15.8506977426175,12.3026950020239,7.78323153457046,9.3210556795154,1.42358718463353,7.74085087202851,11.0587491872119,9.94782360205754,11.6978452271472,3.59527763461689,3.8904848977445,8.16479220342906,8.15571974098251,17.0230283788496,19.1603150644237,17.3103628668517,16.8738663835834,15.0090654565282,20.5518745653836,15.4990655378582,19.4678422523305,15.7948369819905,6.52195779591728,23.6920050116854,23.3905204184712,21.8116249013308,19.6774317746848,18.8118184606885,13.2405442926338,13.5217184601881,11.5116011010275,15.3754391385326,24.4405951096503,13.7692150637346,16.2259590019572,8.5876818502018,8.07288360848605,13.5084185981743,21.8008764396594,11.5589761179996,18.903937267275,14.0888421193406,15.2548661387526,20.7707759227852,24.5184950112594,19.5133647857799,24.9063527687782,19.9318220683897,27.2667654404303,26.0542670398023,24.3485824430913,22.1313059629713,36.1899081454253,15.7732648307426,16.2282210096282,15.7283945393698,28.2569038378514,29.8889800810118,12.131185957874,22.9748543755979,7.57219726599016,8.19921363022941,13.3562506594335,10.0366895140072,14.704712489438,18.1168979704853,12.5491317519217,8.18316402151673,12.6492088942888,39.8438432363041,30.3751782345695,14.6013795007149,18.8948872850148,36.6233672999029,7.96470830039777,13.595715624679,13.9068836203785,9.9960692270626,9.7449624650655,18.1386737286917,13.9551278310839,18.5402202033528,17.1118741624666,18.3301319602773,15.8127912862498,23.721174947083,35.0652793926402,20.3469036255381,12.6771510107099,21.005029433096,25.7143338781297,21.9393645650547,25.9987452551351,20.7036165397928,7.27482294997502,20.5477108737906,19.1859706307817,25.5573692059294,27.4489525383039,26.8392515930294,23.2776070806116,32.8281799490123,10.7847909553045,30.5951748317341,23.9219233116994,15.2726282292785,20.556592538038,26.5599524376614,30.2094243263466,24.936820879511,12.2384469595576,12.5956307091292,10.0885980877229,8.59203556213602,16.449471666219,16.4688768372747,15.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| ||
|short_description=p1@Dennd1a | |short_description=p1@Dennd1a | ||
}} | }} |
Latest revision as of 16:37, 26 September 2015
Short description: | p1@Dennd1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dennd1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000040406, ENSMUST00000090997, ENSMUST00000102787, ENSMUST00000140552, ENSMUST00000143095, ENSMUST00000150896, ENSMUST00000171230, NM_146122, uc008jng.2, uc008jnh.2, uc008jni.2_5end |
EntrezGene: | Dennd1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 6.83e-11 | 73 |
neurectoderm | 7.01e-10 | 64 |
neural plate | 7.01e-10 | 64 |
presumptive neural plate | 7.01e-10 | 64 |
pre-chordal neural plate | 1.64e-09 | 49 |
ectoderm-derived structure | 3.84e-09 | 95 |
ectoderm | 3.84e-09 | 95 |
presumptive ectoderm | 3.84e-09 | 95 |
regional part of nervous system | 6.77e-09 | 54 |
neural tube | 1.15e-08 | 52 |
neural rod | 1.15e-08 | 52 |
future spinal cord | 1.15e-08 | 52 |
neural keel | 1.15e-08 | 52 |
brain | 2.57e-08 | 47 |
future brain | 2.57e-08 | 47 |
structure with developmental contribution from neural crest | 2.79e-08 | 92 |
regional part of brain | 8.14e-08 | 46 |
anterior neural tube | 7.51e-07 | 40 |