FFCP PHASE1:Hg19::chr2:119916459..119916470,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002322!5.25e-16!5 | |ontology_enrichment_celltype=CL:0002322!5.25e-16!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.19e-67!57;UBERON:0005068!3.19e-67!57;UBERON:0006241!3.19e-67!57;UBERON:0007135!3.19e-67!57;UBERON:0001893!3.11e-60!34;UBERON:0003080!3.48e-60!42;UBERON:0002020!1.01e-59!34;UBERON:0003528!1.01e-59!34;UBERON:0002616!2.86e-57!59;UBERON:0002780!3.07e-57!41;UBERON:0001890!3.07e-57!41;UBERON:0006240!3.07e-57!41;UBERON:0002791!4.19e-57!33;UBERON:0001869!1.86e-54!32;UBERON:0002346!2.91e-53!90;UBERON:0003075!5.68e-53!86;UBERON:0007284!5.68e-53!86;UBERON:0005743!3.10e-52!86;UBERON:0001017!3.57e-52!82;UBERON:0000955!3.10e-50!69;UBERON:0006238!3.10e-50!69;UBERON:0000073!4.02e-49!94;UBERON:0001016!4.02e-49!94;UBERON:0003056!1.55e-45!61;UBERON:0002619!6.13e-45!22;UBERON:0001950!4.54e-44!20;UBERON:0007023!2.56e-42!115;UBERON:0000956!3.41e-39!25;UBERON:0000203!3.41e-39!25;UBERON:0000924!2.86e-30!173;UBERON:0006601!2.86e-30!173;UBERON:0000033!4.58e-30!123;UBERON:0004121!1.89e-29!169;UBERON:0000153!3.01e-28!129;UBERON:0007811!3.01e-28!129;UBERON:0002420!2.90e-23!9;UBERON:0007245!2.90e-23!9;UBERON:0010009!2.90e-23!9;UBERON:0010011!2.90e-23!9;UBERON:0000454!2.90e-23!9;UBERON:0002308!3.20e-22!9;UBERON:0000125!3.20e-22!9;UBERON:0001871!1.89e-20!7;UBERON:0009663!1.04e-16!7;UBERON:0000025!1.02e-15!194;UBERON:0000200!3.49e-14!6;UBERON:0002298!3.67e-14!8;UBERON:0000349!7.95e-12!5;UBERON:0001872!1.20e-11!5;UBERON:0002021!1.70e-11!5;UBERON:0004111!6.78e-11!241;UBERON:0002771!1.19e-10!3;UBERON:0006331!2.39e-10!3;UBERON:0000483!6.07e-10!309;UBERON:0000119!9.40e-10!312;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0000064!1.18e-08!219;UBERON:0000477!1.62e-08!286;UBERON:0001876!1.75e-08!2;UBERON:0000369!4.77e-08!4;UBERON:0002435!4.77e-08!4;UBERON:0000204!4.77e-08!4;UBERON:0010082!4.77e-08!4;UBERON:0002950!5.22e-08!2;UBERON:0001891!5.22e-08!2;UBERON:0009616!5.22e-08!2;UBERON:0001875!1.18e-07!2;UBERON:0006514!1.18e-07!2;UBERON:0002148!2.89e-07!2;UBERON:0009662!2.89e-07!2;UBERON:0000475!6.44e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!3.19e-67!57;UBERON:0005068!3.19e-67!57;UBERON:0006241!3.19e-67!57;UBERON:0007135!3.19e-67!57;UBERON:0001893!3.11e-60!34;UBERON:0003080!3.48e-60!42;UBERON:0002020!1.01e-59!34;UBERON:0003528!1.01e-59!34;UBERON:0002616!2.86e-57!59;UBERON:0002780!3.07e-57!41;UBERON:0001890!3.07e-57!41;UBERON:0006240!3.07e-57!41;UBERON:0002791!4.19e-57!33;UBERON:0001869!1.86e-54!32;UBERON:0002346!2.91e-53!90;UBERON:0003075!5.68e-53!86;UBERON:0007284!5.68e-53!86;UBERON:0005743!3.10e-52!86;UBERON:0001017!3.57e-52!82;UBERON:0000955!3.10e-50!69;UBERON:0006238!3.10e-50!69;UBERON:0000073!4.02e-49!94;UBERON:0001016!4.02e-49!94;UBERON:0003056!1.55e-45!61;UBERON:0002619!6.13e-45!22;UBERON:0001950!4.54e-44!20;UBERON:0007023!2.56e-42!115;UBERON:0000956!3.41e-39!25;UBERON:0000203!3.41e-39!25;UBERON:0000924!2.86e-30!173;UBERON:0006601!2.86e-30!173;UBERON:0000033!4.58e-30!123;UBERON:0004121!1.89e-29!169;UBERON:0000153!3.01e-28!129;UBERON:0007811!3.01e-28!129;UBERON:0002420!2.90e-23!9;UBERON:0007245!2.90e-23!9;UBERON:0010009!2.90e-23!9;UBERON:0010011!2.90e-23!9;UBERON:0000454!2.90e-23!9;UBERON:0002308!3.20e-22!9;UBERON:0000125!3.20e-22!9;UBERON:0001871!1.89e-20!7;UBERON:0009663!1.04e-16!7;UBERON:0000025!1.02e-15!194;UBERON:0000200!3.49e-14!6;UBERON:0002298!3.67e-14!8;UBERON:0000349!7.95e-12!5;UBERON:0001872!1.20e-11!5;UBERON:0002021!1.70e-11!5;UBERON:0004111!6.78e-11!241;UBERON:0002771!1.19e-10!3;UBERON:0006331!2.39e-10!3;UBERON:0000483!6.07e-10!309;UBERON:0000119!9.40e-10!312;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0000064!1.18e-08!219;UBERON:0000477!1.62e-08!286;UBERON:0001876!1.75e-08!2;UBERON:0000369!4.77e-08!4;UBERON:0002435!4.77e-08!4;UBERON:0000204!4.77e-08!4;UBERON:0010082!4.77e-08!4;UBERON:0002950!5.22e-08!2;UBERON:0001891!5.22e-08!2;UBERON:0009616!5.22e-08!2;UBERON:0001875!1.18e-07!2;UBERON:0006514!1.18e-07!2;UBERON:0002148!2.89e-07!2;UBERON:0009662!2.89e-07!2;UBERON:0000475!6.44e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.19e-22;20!UBERON:0002619;5.04e-20;22!UBERON:0000956;8.75e-18;25!UBERON:0000203;8.75e-18;25!UBERON:0001871;4.73e-17;6!UBERON:0002771;2.21e-15;2!UBERON:0001876;2.21e-15;2!UBERON:0002791;5.87e-13;32!UBERON:0001869;5.87e-13;32!UBERON:0001893;1.65e-12;34!UBERON:0003528;2.53e-12;34!UBERON:0002020;2.53e-12;34!UBERON:0002780;3.70e-11;41!UBERON:0001890;3.70e-11;41!UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5!UBERON:0001872;6.21e-07;5!UBERON:0002021;6.21e-07;5!UBERON:0000349;6.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001950;7.19e-22;20!UBERON:0002619;5.04e-20;22!UBERON:0000956;8.75e-18;25!UBERON:0000203;8.75e-18;25!UBERON:0001871;4.73e-17;6!UBERON:0002771;2.21e-15;2!UBERON:0001876;2.21e-15;2!UBERON:0002791;5.87e-13;32!UBERON:0001869;5.87e-13;32!UBERON:0001893;1.65e-12;34!UBERON:0003528;2.53e-12;34!UBERON:0002020;2.53e-12;34!UBERON:0002780;3.70e-11;41!UBERON:0001890;3.70e-11;41!UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5!UBERON:0001872;6.21e-07;5!UBERON:0002021;6.21e-07;5!UBERON:0000349;6.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.19e-22,20;UBERON:0002619,5.04e-20,22;UBERON:0000956,8.75e-18,25;UBERON:0000203,8.75e-18,25;UBERON:0001871,4.73e-17,6;UBERON:0001876,2.05e-15,2;UBERON:0002771,2.37e-15,2;UBERON:0002791,3.91e-14,32;UBERON:0001869,3.91e-14,32;UBERON:0003528,2.34e-13,34;UBERON:0002020,2.34e-13,34;UBERON:0001893,2.34e-13,34;UBERON:0002780,3.23e-11,41;UBERON:0001890,3.23e-11,41;UBERON:0003080,3.23e-11,41;UBERON:0006240,3.23e-11,41;UBERON:0000073,7.90e-09,53;UBERON:0002616,7.90e-09,53;UBERON:0002346,1.96e-08,86;UBERON:0001049,2.18e-08,56;UBERON:0005068,2.18e-08,56;UBERON:0006241,2.18e-08,56;UBERON:0007135,2.18e-08,56;UBERON:0003056,9.59e-08,61;UBERON:0002021,5.70e-07,5;UBERON:0000349,6.04e-07,5;UBERON:0000955,6.64e-07,68;UBERON:0006238,6.64e-07,68;UBERON:0001872,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,6.70690610781485,0,0,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,5.20530209887809,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0.638535436228605,0.205116364240755,0,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,1.03343398250592,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,0.628462359664008,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.747906392100062,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,6.70690610781485,0,0,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,5.20530209887809,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0.638535436228605,0.205116364240755,0,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,1.03343398250592,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,0.628462359664008,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.747906392100062,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p3@C1QL2 | |short_description=p3@C1QL2 | ||
}} | }} |
Revision as of 05:51, 18 November 2012
Short description: | p3@C1QL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C1QL2_5end |
Coexpression cluster: | C1064_carcinoid_neuroectodermal_amygdala_insula_temporal_frontal_hippocampus |
Association with transcript: | 0bp_to_ENST00000272520, NM_182528, uc002tlo.2_5end |
EntrezGene: | C1QL2 |
HGNC: | 24181 |
UniProt: | Q7Z5L3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 7.19e-22 | 20 |
regional part of cerebral cortex | 5.04e-20 | 22 |
cerebral cortex | 8.75e-18 | 25 |
pallium | 8.75e-18 | 25 |
temporal lobe | 4.73e-17 | 6 |
amygdala | 2.05e-15 | 2 |
middle temporal gyrus | 2.37e-15 | 2 |
regional part of telencephalon | 3.91e-14 | 32 |
cerebral hemisphere | 3.91e-14 | 32 |
brain grey matter | 2.34e-13 | 34 |
gray matter | 2.34e-13 | 34 |
telencephalon | 2.34e-13 | 34 |
regional part of forebrain | 3.23e-11 | 41 |
forebrain | 3.23e-11 | 41 |
anterior neural tube | 3.23e-11 | 41 |
future forebrain | 3.23e-11 | 41 |
regional part of nervous system | 7.90e-09 | 53 |
regional part of brain | 7.90e-09 | 53 |
neurectoderm | 1.96e-08 | 86 |
neural tube | 2.18e-08 | 56 |
neural rod | 2.18e-08 | 56 |
future spinal cord | 2.18e-08 | 56 |
neural keel | 2.18e-08 | 56 |
pre-chordal neural plate | 9.59e-08 | 61 |
occipital lobe | 5.70e-07 | 5 |
limbic system | 6.04e-07 | 5 |
brain | 6.64e-07 | 68 |
future brain | 6.64e-07 | 68 |
parietal lobe | 6.77e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.