FFCP PHASE1:Mm9::chr11:77851461..77851544,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14252|HGNC=|MCL_coexpression_id=3|UniProt=Q5SS83,Q3UEG9|association_with_transcript=0bp_to_ENSMUST00000073660,ENSMUST00000100786_5end|description=CAGE_peak_1_at_Flot2_5end|id=chr11:77851461..77851544,+|ontology_enrichment_celltype=CL:0000055!2.23e-12!50;CL:0002319!3.80e-10!43;CL:0000221!7.57e-10!44;CL:0000133!7.57e-10!44;CL:0000393!8.75e-08!39;CL:0000211!8.75e-08!39|ontology_enrichment_celltype_v019_2=CL:0002319,3.80e-10,43;CL:0000221,7.56e-10,44;CL:0000133,7.56e-10,44;CL:0000393,8.75e-08,39;CL:0000211,8.75e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.77e-14!75;UBERON:0001016!2.77e-14!75;UBERON:0001017!7.35e-14!73;UBERON:0005743!7.35e-14!73;UBERON:0000025!1.10e-13!114;UBERON:0004111!3.35e-12!122;UBERON:0004121!4.94e-11!102;UBERON:0000924!4.94e-11!102;UBERON:0006601!4.94e-11!102;UBERON:0002346!6.74e-10!71;UBERON:0003075!6.74e-10!71;UBERON:0007284!6.74e-10!71;UBERON:0001049!3.44e-09!52;UBERON:0005068!3.44e-09!52;UBERON:0006241!3.44e-09!52;UBERON:0007135!3.44e-09!52;UBERON:0004535!2.34e-08!23;UBERON:0001009!2.34e-08!23;UBERON:0002616!3.56e-07!49;UBERON:0000955!9.84e-07!50;UBERON:0006238!9.84e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.14e-14,92;UBERON:0001016,2.77e-14,75;UBERON:0001017,7.35e-14,73;UBERON:0000025,1.10e-13,114;UBERON:0004111,3.34e-12,122;UBERON:0004121,3.53e-10,95;UBERON:0000924,3.53e-10,95;UBERON:0006601,3.53e-10,95;UBERON:0000073,1.74e-09,54;UBERON:0001049,3.44e-09,52;UBERON:0005068,3.44e-09,52;UBERON:0006241,3.44e-09,52;UBERON:0007135,3.44e-09,52;UBERON:0002346,3.62e-09,64;UBERON:0003075,3.62e-09,64;UBERON:0007284,3.62e-09,64;UBERON:0004535,2.34e-08,23;UBERON:0001009,2.34e-08,23|phase1_expression=10.5698239089164,0.697950815278722,1.36499771816861,0.60492842261366,0,5.87577451691614,5.37309073369709,5.29405626110463,1.12630977721333,2.57470978954193,0.171217968225505,0.558405112967355,9.0736386863539,6.8187913886818,3.66420737997229,5.4668322195253,9.79386629379405,4.73193248037357,3.29074640653773,2.12194825899015,16.6684848696097,0.0992909512008853,0,3.03985603307473,3.67054849707472,2.29692785646008,0.86152399231815,2.58565479223067,2.09025761402011,2.77233142735924,3.99114919179548,0.635030673459631,2.46025915033828,0,6.06588401477677,5.48574329683025,5.3084032628216,199.221056230768,170.331105106188,124.598651065764,118.234529094234,140.70736990144,134.971878142661,26.3124349568957,26.3580021170738,18.5382219683298,40.684349906098,46.0033079962742,44.5962950950978,42.9690076954166,40.5960622713551,41.6882436658418,2.51673909086605,10.1550699881588,4.03312558970957,29.8420945801698,30.9456115133857,32.4873418134789,17.1968991730658,14.8117474196169,13.9442908771359,39.3059657200193,37.3503814366679,22.9474427906757,21.7550599764734,24.1563239081674,38.0492140358374,48.0272881651943,13.2722703754851,15.1206650931494,14.5124223332454,50.2745732550694,39.5354688303388,13.7189695120749,14.185129710699,14.7075005857603,19.82085857989,20.0469120793745,21.6585211891303,16.4857859662742,18.6634792948916,17.1901412283731,27.080750903134,14.069065250792,25.2117108831737,35.9446874277875,35.3081768381775,31.8743052361264,14.9937862799704,36.4254919714706,27.8269909153611,15.487629785665,12.2394840067395,10.2543606411185,13.6453047664011,18.3691023709908,16.993774835942,26.7575606447551,17.1458763037893,19.7870161725791,13.3801248787846,23.0987659345772,12.7402619853323,14.2213340630666,15.5873549528074,15.7083116594561,14.1546844604139,13.35951392713,10.3575153458869,32.3603863161318,17.6955033301459,14.0054120023585,15.2206228188999,14.4693734930518,19.4021366773913,27.3953169098693,13.1013332899218,35.7160411592182,28.307537662396,19.4120219936891,15.0172232553068,13.091631834651,9.31958806090611,16.3957246326466,20.5257772677186,5.10914110417183,9.22576458695586,6.59893004092748,12.8340929343795,25.9137806170343,11.8950156732843,11.1832373380449,23.292458905765,31.1972857943003,16.8308316093244,19.4689515681309,19.7568365869614,18.5366386209039,8.33985102831127,7.36546495602659,11.840960309606,13.3343220571414,17.1059023315082,14.3169576943929,19.2543292598258,16.3985561964608,17.8033276663485,15.5222022443409,12.7185115830377,10.5899404893979,9.67731182901719,12.4941567483718,13.6243152120543,11.8405736617537,13.1700567301084,11.3449532086541,20.3641824320838,17.4996576838006,28.4163499395593,15.7415587126981,13.8370375388847,19.0865785148676,23.2009840873506,21.2505370287196,22.3687313686698,25.5787339225449,31.1197145623558,29.7751623036282,30.4435722339939,23.4759473633106,28.0498081028661,27.3393976485371,20.4181607220677,20.8019949078576,18.7158054222073,18.7286394530298,0.991256348951394,5.55346189993443,6.39864751605702,9.52170354627798,12.5001437482431,10.4875432804138,9.78463392917429,7.03834816616469,3.79623249235609,8.89374355509659,9.29940272560997,8.35617182572834,10.5280607044325,9.88701349519644,4.53889904736858,7.36822711041159,12.5180814629034,9.59687505921722,6.76246414038483,13.0336849821001,9.69762435838129,11.7126819216832,13.6590920188396,10.1851002105925,10.3619160375307,14.8076596706161,16.6013471168803,12.1796927172749,13.1694526725846,13.4917267430912,12.1716072833102,12.0588579876208,11.7127891819453,12.6586300478357,9.56597837972709,11.5315793538994,17.2521847832825,18.6070473834252,16.8500343481863,16.4176270665623,10.7638448113147,10.1313139486307,21.0618636789929,9.28507917675375,10.7556884451737,11.8821560042632,13.6120344007331,17.9231695462743,20.7097967570832,23.8063050386515,21.1231093102296,19.9318220683897,20.7291199254733,19.8274610806043,19.858772914578,24.1563927831124,18.0949540727127,9.79030230873677,4.91764273019036,11.313406598494,26.6513979379735,21.4497386463732,15.2459499200308,26.0045055020504,21.4545589203055,26.9402733564681,27.1433481143327,20.0733790280144,25.3990488453929,19.5322806244294,23.8838313988188,30.3946092227764,29.2512955680427,8.9969968598106,19.019971417908,21.5459380437379,20.1979829598434,18.1467135269789,6.63725691699814,12.3818124439041,13.9068836203785,10.1846743068185,15.651000322681,16.6014979889721,17.0562673491026,12.3601468022352,14.2598951353889,8.21695570633122,4.21674434299995,6.18813259489121,14.9793426531667,13.8647042404109,14.746889951234,16.289614662401,12.2364761213169,20.155676389034,22.0495687606842,28.9241701658869,11.7335854031855,7.41412248023371,9.92377791247329,9.23363016472288,16.7923003763742,12.364149610272,13.6084472163576,7.87876318776294,6.70405924248657,26.5158181875029,11.1066072518604,12.5895989457566,14.6303676622072,8.66494902221579,6.69801715833023,5.71945433016307,10.8786195196067,13.1554365184239,12.0233977209849,4.77335309007557,15.8167996790568,13.419084830372,12.7446302169725,10.245326504709,9.60795280483181,15.6442641806392,16.0347704107152,13.0877970992015,7.2584385043404,14.2908042009993,5.6369293868419,11.5127740453864,14.7258056506817,14.0004855607714,15.8866582877609,12.3337971608268,17.3688713195716,14.0620735631466,15.5191829750052,7.48910774560619,7.77681016896237,8.84831137758899,14.1907650703115,10.8873614594717,6.62596197186755,8.95133478337407,7.9472541912506,8.29348601687785,8.71368210330006,6.05798699688886,9.52585083187498,7.25948532985252,5.26272555994663,10.3908788971556,8.88264456579924,12.2434407152214,26.6383144048878,15.4307833368298,16.9563462527719,25.6942160062813,24.774086759556,11.3554007045704,5.14484109789758,13.5424468089548,29.3670958160875,34.5243927380383,33.227939779485,36.4328746568618,26.0331357512844,18.1294535373528,24.9758325085768,21.1650965515384,14.0474146785103,19.6748918465692,10.2749474108335,11.1726964552289,10.7562171625105,13.8570828728928,12.367176595051,18.3843508450014,20.4466989577486,21.427645952845,14.7622836412235,18.4468964587572,19.2644267916582,15.4673599936582,17.1363958669885,20.7441493791776,18.0921727210182,19.528041342606,17.7303018695629,23.534924896572,15.2471783297223,18.3998650167997,16.1148548621145,18.8124354528898,20.7439485254169,16.8601843293501,15.6221571489449,17.4306092256854,15.3659497213129,16.8364615320219,18.0619471414996,16.8342681497322,19.2188729361162,18.2233292394792,21.6892452879935,17.1979893716422,14.0821826016233,19.9848462350357,18.4805970671873,18.693781702202,23.9110415086054,29.5592501620151,19.9406338633562|short_description=p1@Flot2}} | ||
|EntrezGene=14252 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q5SS83,Q3UEG9 | |||
|association_with_transcript=0bp_to_ENSMUST00000073660,ENSMUST00000100786_5end | |||
|description=CAGE_peak_1_at_Flot2_5end | |||
|id=chr11:77851461..77851544,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.23e-12!50;CL:0002319!3.80e-10!43;CL:0000221!7.57e-10!44;CL:0000133!7.57e-10!44;CL:0000393!8.75e-08!39;CL:0000211!8.75e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.80e-10,43;CL:0000221,7.56e-10,44;CL:0000133,7.56e-10,44;CL:0000393,8.75e-08,39;CL:0000211,8.75e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.77e-14!75;UBERON:0001016!2.77e-14!75;UBERON:0001017!7.35e-14!73;UBERON:0005743!7.35e-14!73;UBERON:0000025!1.10e-13!114;UBERON:0004111!3.35e-12!122;UBERON:0004121!4.94e-11!102;UBERON:0000924!4.94e-11!102;UBERON:0006601!4.94e-11!102;UBERON:0002346!6.74e-10!71;UBERON:0003075!6.74e-10!71;UBERON:0007284!6.74e-10!71;UBERON:0001049!3.44e-09!52;UBERON:0005068!3.44e-09!52;UBERON:0006241!3.44e-09!52;UBERON:0007135!3.44e-09!52;UBERON:0004535!2.34e-08!23;UBERON:0001009!2.34e-08!23;UBERON:0002616!3.56e-07!49;UBERON:0000955!9.84e-07!50;UBERON:0006238!9.84e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.14e-14,92;UBERON:0001016,2.77e-14,75;UBERON:0001017,7.35e-14,73;UBERON:0000025,1.10e-13,114;UBERON:0004111,3.34e-12,122;UBERON:0004121,3.53e-10,95;UBERON:0000924,3.53e-10,95;UBERON:0006601,3.53e-10,95;UBERON:0000073,1.74e-09,54;UBERON:0001049,3.44e-09,52;UBERON:0005068,3.44e-09,52;UBERON:0006241,3.44e-09,52;UBERON:0007135,3.44e-09,52;UBERON:0002346,3.62e-09,64;UBERON:0003075,3.62e-09,64;UBERON:0007284,3.62e-09,64;UBERON:0004535,2.34e-08,23;UBERON:0001009,2.34e-08,23 | |||
|phase1_expression=10.5698239089164,0.697950815278722,1.36499771816861,0.60492842261366,0,5.87577451691614,5.37309073369709,5.29405626110463,1.12630977721333,2.57470978954193,0.171217968225505,0.558405112967355,9.0736386863539,6.8187913886818,3.66420737997229,5.4668322195253,9.79386629379405,4.73193248037357,3.29074640653773,2.12194825899015,16.6684848696097,0.0992909512008853,0,3.03985603307473,3.67054849707472,2.29692785646008,0.86152399231815,2.58565479223067,2.09025761402011,2.77233142735924,3.99114919179548,0.635030673459631,2.46025915033828,0,6.06588401477677,5.48574329683025,5.3084032628216,199.221056230768,170.331105106188,124.598651065764,118.234529094234,140.70736990144,134.971878142661,26.3124349568957,26.3580021170738,18.5382219683298,40.684349906098,46.0033079962742,44.5962950950978,42.9690076954166,40.5960622713551,41.6882436658418,2.51673909086605,10.1550699881588,4.03312558970957,29.8420945801698,30.9456115133857,32.4873418134789,17.1968991730658,14.8117474196169,13.9442908771359,39.3059657200193,37.3503814366679,22.9474427906757,21.7550599764734,24.1563239081674,38.0492140358374,48.0272881651943,13.2722703754851,15.1206650931494,14.5124223332454,50.2745732550694,39.5354688303388,13.7189695120749,14.185129710699,14.7075005857603,19.82085857989,20.0469120793745,21.6585211891303,16.4857859662742,18.6634792948916,17.1901412283731,27.080750903134,14.069065250792,25.2117108831737,35.9446874277875,35.3081768381775,31.8743052361264,14.9937862799704,36.4254919714706,27.8269909153611,15.487629785665,12.2394840067395,10.2543606411185,13.6453047664011,18.3691023709908,16.993774835942,26.7575606447551,17.1458763037893,19.7870161725791,13.3801248787846,23.0987659345772,12.7402619853323,14.2213340630666,15.5873549528074,15.7083116594561,14.1546844604139,13.35951392713,10.3575153458869,32.3603863161318,17.6955033301459,14.0054120023585,15.2206228188999,14.4693734930518,19.4021366773913,27.3953169098693,13.1013332899218,35.7160411592182,28.307537662396,19.4120219936891,15.0172232553068,13.091631834651,9.31958806090611,16.3957246326466,20.5257772677186,5.10914110417183,9.22576458695586,6.59893004092748,12.8340929343795,25.9137806170343,11.8950156732843,11.1832373380449,23.292458905765,31.1972857943003,16.8308316093244,19.4689515681309,19.7568365869614,18.5366386209039,8.33985102831127,7.36546495602659,11.840960309606,13.3343220571414,17.1059023315082,14.3169576943929,19.2543292598258,16.3985561964608,17.8033276663485,15.5222022443409,12.7185115830377,10.5899404893979,9.67731182901719,12.4941567483718,13.6243152120543,11.8405736617537,13.1700567301084,11.3449532086541,20.3641824320838,17.4996576838006,28.4163499395593,15.7415587126981,13.8370375388847,19.0865785148676,23.2009840873506,21.2505370287196,22.3687313686698,25.5787339225449,31.1197145623558,29.7751623036282,30.4435722339939,23.4759473633106,28.0498081028661,27.3393976485371,20.4181607220677,20.8019949078576,18.7158054222073,18.7286394530298,0.991256348951394,5.55346189993443,6.39864751605702,9.52170354627798,12.5001437482431,10.4875432804138,9.78463392917429,7.03834816616469,3.79623249235609,8.89374355509659,9.29940272560997,8.35617182572834,10.5280607044325,9.88701349519644,4.53889904736858,7.36822711041159,12.5180814629034,9.59687505921722,6.76246414038483,13.0336849821001,9.69762435838129,11.7126819216832,13.6590920188396,10.1851002105925,10.3619160375307,14.8076596706161,16.6013471168803,12.1796927172749,13.1694526725846,13.4917267430912,12.1716072833102,12.0588579876208,11.7127891819453,12.6586300478357,9.56597837972709,11.5315793538994,17.2521847832825,18.6070473834252,16.8500343481863,16.4176270665623,10.7638448113147,10.1313139486307,21.0618636789929,9.28507917675375,10.7556884451737,11.8821560042632,13.6120344007331,17.9231695462743,20.7097967570832,23.8063050386515,21.1231093102296,19.9318220683897,20.7291199254733,19.8274610806043,19.858772914578,24.1563927831124,18.0949540727127,9.79030230873677,4.91764273019036,11.313406598494,26.6513979379735,21.4497386463732,15.2459499200308,26.0045055020504,21.4545589203055,26.9402733564681,27.1433481143327,20.0733790280144,25.3990488453929,19.5322806244294,23.8838313988188,30.3946092227764,29.2512955680427,8.9969968598106,19.019971417908,21.5459380437379,20.1979829598434,18.1467135269789,6.63725691699814,12.3818124439041,13.9068836203785,10.1846743068185,15.651000322681,16.6014979889721,17.0562673491026,12.3601468022352,14.2598951353889,8.21695570633122,4.21674434299995,6.18813259489121,14.9793426531667,13.8647042404109,14.746889951234,16.289614662401,12.2364761213169,20.155676389034,22.0495687606842,28.9241701658869,11.7335854031855,7.41412248023371,9.92377791247329,9.23363016472288,16.7923003763742,12.364149610272,13.6084472163576,7.87876318776294,6.70405924248657,26.5158181875029,11.1066072518604,12.5895989457566,14.6303676622072,8.66494902221579,6.69801715833023,5.71945433016307,10.8786195196067,13.1554365184239,12.0233977209849,4.77335309007557,15.8167996790568,13.419084830372,12.7446302169725,10.245326504709,9.60795280483181,15.6442641806392,16.0347704107152,13.0877970992015,7.2584385043404,14.2908042009993,5.6369293868419,11.5127740453864,14.7258056506817,14.0004855607714,15.8866582877609,12.3337971608268,17.3688713195716,14.0620735631466,15.5191829750052,7.48910774560619,7.77681016896237,8.84831137758899,14.1907650703115,10.8873614594717,6.62596197186755,8.95133478337407,7.9472541912506,8.29348601687785,8.71368210330006,6.05798699688886,9.52585083187498,7.25948532985252,5.26272555994663,10.3908788971556,8.88264456579924,12.2434407152214,26.6383144048878,15.4307833368298,16.9563462527719,25.6942160062813,24.774086759556,11.3554007045704,5.14484109789758,13.5424468089548,29.3670958160875,34.5243927380383,33.227939779485,36.4328746568618,26.0331357512844,18.1294535373528,24.9758325085768,21.1650965515384,14.0474146785103,19.6748918465692,10.2749474108335,11.1726964552289,10.7562171625105,13.8570828728928,12.367176595051,18.3843508450014,20.4466989577486,21.427645952845,14.7622836412235,18.4468964587572,19.2644267916582,15.4673599936582,17.1363958669885,20.7441493791776,18.0921727210182,19.528041342606,17.7303018695629,23.534924896572,15.2471783297223,18.3998650167997,16.1148548621145,18.8124354528898,20.7439485254169,16.8601843293501,15.6221571489449,17.4306092256854,15.3659497213129,16.8364615320219,18.0619471414996,16.8342681497322,19.2188729361162,18.2233292394792,21.6892452879935,17.1979893716422,14.0821826016233,19.9848462350357,18.4805970671873,18.693781702202,23.9110415086054,29.5592501620151,19.9406338633562 | |||
|short_description=p1@Flot2 | |||
}} |
Revision as of 21:01, 12 September 2013
Short description: | p1@Flot2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Flot2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000073660, ENSMUST00000100786_5end |
EntrezGene: | Flot2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.80e-10 | 43 |
ectodermal cell | 7.56e-10 | 44 |
neurectodermal cell | 7.56e-10 | 44 |
electrically responsive cell | 8.75e-08 | 39 |
electrically active cell | 8.75e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.14e-14 | 92 |
nervous system | 2.77e-14 | 75 |
central nervous system | 7.35e-14 | 73 |
tube | 1.10e-13 | 114 |
anatomical conduit | 3.34e-12 | 122 |
ectoderm-derived structure | 3.53e-10 | 95 |
ectoderm | 3.53e-10 | 95 |
presumptive ectoderm | 3.53e-10 | 95 |
regional part of nervous system | 1.74e-09 | 54 |
neural tube | 3.44e-09 | 52 |
neural rod | 3.44e-09 | 52 |
future spinal cord | 3.44e-09 | 52 |
neural keel | 3.44e-09 | 52 |
neurectoderm | 3.62e-09 | 64 |
neural plate | 3.62e-09 | 64 |
presumptive neural plate | 3.62e-09 | 64 |
cardiovascular system | 2.34e-08 | 23 |
circulatory system | 2.34e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.