FFCP PHASE1:Mm9::chr17:34740683..34740694,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54197|HGNC=|MCL_coexpression_id=0|UniProt=O35445|association_with_transcript=-48bp_to_ENSMUST00000015622_5end|description=CAGE_peak_6_at_Rnf5_5end|id=chr17:34740683..34740694,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000710,1.55e-13,1;CL:0002077,1.55e-13,1;CL:0005014,1.55e-13,1;CL:0002315,1.55e-13,1;CL:0002490,1.55e-13,1;CL:0000878,1.52e-07,2;CL:0000129,1.52e-07,2;CL:0000197,2.03e-07,2;CL:0002491,2.03e-07,2;CL:0000098,2.03e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.71e-08!102;UBERON:0000924!1.71e-08!102;UBERON:0006601!1.71e-08!102;UBERON:0000073!4.20e-07!75;UBERON:0001016!4.20e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004766,2.03e-07,2;UBERON:0008193,2.03e-07,2;UBERON:0005913,2.03e-07,2;UBERON:0011158,2.03e-07,2;UBERON:0005744,2.03e-07,2;UBERON:0003457,2.03e-07,2;UBERON:0008001,2.03e-07,2;UBERON:0007497,2.03e-07,2;UBERON:0009955,2.03e-07,2;UBERON:0003067,2.03e-07,2;UBERON:0002546,2.03e-07,2;UBERON:0007914,2.03e-07,2;UBERON:0005253,2.03e-07,2;UBERON:0002227,2.03e-07,2;UBERON:0001846,2.03e-07,2;UBERON:0004339,2.03e-07,2;UBERON:0002105,2.03e-07,2;UBERON:0001678,2.03e-07,2;UBERON:0003128,2.03e-07,2;UBERON:0001694,2.03e-07,2;UBERON:0004681,2.03e-07,2;UBERON:0001839,2.03e-07,2;UBERON:0001690,2.03e-07,2;UBERON:0001844,2.03e-07,2;UBERON:0001849,2.03e-07,2;UBERON:0002499,2.03e-07,2;UBERON:0001855,2.03e-07,2;UBERON:0011137,2.03e-07,2;UBERON:0001703,2.03e-07,2;UBERON:0010323,2.03e-07,2;UBERON:0003129,2.03e-07,2;UBERON:0003069,2.03e-07,2;UBERON:0003051,2.03e-07,2;UBERON:0004637,2.03e-07,2;UBERON:0004761,2.03e-07,2;UBERON:0010113,2.03e-07,2;UBERON:0009123,2.03e-07,2;UBERON:0010351,2.03e-07,2;UBERON:0009617,2.03e-07,2;UBERON:0005641,2.03e-07,2;UBERON:0010349,2.03e-07,2;UBERON:0001896,2.35e-07,2;UBERON:0002298,2.35e-07,2;UBERON:0005290,2.35e-07,2;UBERON:0010096,2.35e-07,2|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,3.31668831589172,0.496454756004426,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.971020706062307,0.251793635951155,0,0,0,0.65407546914134,0.439372365468944,0.388859798148567,0.55994568650145,0,0.167782606057736,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0,0.599200221036809,1.53687322128622,0.207379224616955,0,0,0.571301968807607,0.220868540951614,0,0.575072826109418,0.919218786610021,0,0.893811366596314,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0.837548997004143,0,0.763991238884051,0.589257170947335,0.142371680799103,0,0.605809546665472,0.226714680320357,0,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,0,0.608930956624282,0,0,0.352766121407114,0.502666365318702,0.247194967734374,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0.376963056338593,0.869121600961382,0.511430914660661,0.62336413367868,0.162241263067758,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.476255494059295,0.384341160854549,0.749613796477831,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.617068451549513,0,0,0.350296027101508,0.493679549740441,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0.632365371242573,0.590440591918409,0.627994911365499,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.964708639009667,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0.37898282354097,0.325929952884052,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.472905432318573,0,0.637819074629948,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,1.12385412991454,0.234423373184406,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296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| ||
|EntrezGene=54197 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=O35445 | |||
|association_with_transcript=-48bp_to_ENSMUST00000015622_5end | |||
|description=CAGE_peak_6_at_Rnf5_5end | |||
|id=chr17:34740683..34740694,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,1.55e-13,1;CL:0002077,1.55e-13,1;CL:0005014,1.55e-13,1;CL:0002315,1.55e-13,1;CL:0002490,1.55e-13,1;CL:0000878,1.52e-07,2;CL:0000129,1.52e-07,2;CL:0000197,2.03e-07,2;CL:0002491,2.03e-07,2;CL:0000098,2.03e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.71e-08!102;UBERON:0000924!1.71e-08!102;UBERON:0006601!1.71e-08!102;UBERON:0000073!4.20e-07!75;UBERON:0001016!4.20e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004766,2.03e-07,2;UBERON:0008193,2.03e-07,2;UBERON:0005913,2.03e-07,2;UBERON:0011158,2.03e-07,2;UBERON:0005744,2.03e-07,2;UBERON:0003457,2.03e-07,2;UBERON:0008001,2.03e-07,2;UBERON:0007497,2.03e-07,2;UBERON:0009955,2.03e-07,2;UBERON:0003067,2.03e-07,2;UBERON:0002546,2.03e-07,2;UBERON:0007914,2.03e-07,2;UBERON:0005253,2.03e-07,2;UBERON:0002227,2.03e-07,2;UBERON:0001846,2.03e-07,2;UBERON:0004339,2.03e-07,2;UBERON:0002105,2.03e-07,2;UBERON:0001678,2.03e-07,2;UBERON:0003128,2.03e-07,2;UBERON:0001694,2.03e-07,2;UBERON:0004681,2.03e-07,2;UBERON:0001839,2.03e-07,2;UBERON:0001690,2.03e-07,2;UBERON:0001844,2.03e-07,2;UBERON:0001849,2.03e-07,2;UBERON:0002499,2.03e-07,2;UBERON:0001855,2.03e-07,2;UBERON:0011137,2.03e-07,2;UBERON:0001703,2.03e-07,2;UBERON:0010323,2.03e-07,2;UBERON:0003129,2.03e-07,2;UBERON:0003069,2.03e-07,2;UBERON:0003051,2.03e-07,2;UBERON:0004637,2.03e-07,2;UBERON:0004761,2.03e-07,2;UBERON:0010113,2.03e-07,2;UBERON:0009123,2.03e-07,2;UBERON:0010351,2.03e-07,2;UBERON:0009617,2.03e-07,2;UBERON:0005641,2.03e-07,2;UBERON:0010349,2.03e-07,2;UBERON:0001896,2.35e-07,2;UBERON:0002298,2.35e-07,2;UBERON:0005290,2.35e-07,2;UBERON:0010096,2.35e-07,2 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.274228867211478,0,3.31668831589172,0.496454756004426,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.971020706062307,0.251793635951155,0,0,0,0.65407546914134,0.439372365468944,0.388859798148567,0.55994568650145,0,0.167782606057736,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0,0.599200221036809,1.53687322128622,0.207379224616955,0,0,0.571301968807607,0.220868540951614,0,0.575072826109418,0.919218786610021,0,0.893811366596314,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0.837548997004143,0,0.763991238884051,0.589257170947335,0.142371680799103,0,0.605809546665472,0.226714680320357,0,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,0,0.608930956624282,0,0,0.352766121407114,0.502666365318702,0.247194967734374,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0.376963056338593,0.869121600961382,0.511430914660661,0.62336413367868,0.162241263067758,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.476255494059295,0.384341160854549,0.749613796477831,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.617068451549513,0,0,0.350296027101508,0.493679549740441,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0.632365371242573,0.590440591918409,0.627994911365499,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.964708639009667,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0.37898282354097,0.325929952884052,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0.472905432318573,0,0.637819074629948,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,1.12385412991454,0.234423373184406,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0.322928853391811,0.542816324353403,0.716234064018819,0.492422699235184,0,0.927126510052548,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,18.0381740378941,0,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,11.8092302565725,0.316011120628178,0.810900861160657,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.0640251524048693,0.402048282689293,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0,0.376437521661322,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.474540072496697,0,0,0.154936841185966,0,0,0.467863216890817,0,0.765153328275374,0,0.463735671240843 | |||
|short_description=p6@Rnf5 | |||
}} |
Revision as of 14:15, 13 September 2013
Short description: | p6@Rnf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rnf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -48bp_to_ENSMUST00000015622_5end |
EntrezGene: | Rnf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 1.55e-13 | 1 |
ecto-epithelial cell | 1.55e-13 | 1 |
auditory epithelial support cell | 1.55e-13 | 1 |
supporting cell of cochlea | 1.55e-13 | 1 |
organ of Corti supporting cell | 1.55e-13 | 1 |
central nervous system macrophage | 1.52e-07 | 2 |
microglial cell | 1.52e-07 | 2 |
receptor cell | 2.03e-07 | 2 |
auditory epithelial cell | 2.03e-07 | 2 |
sensory epithelial cell | 2.03e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.