FFCP PHASE1:Mm9::chr14:54852925..54852936,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54852925..54852936,-|id=chr14:54852925..54852936,-|ontology_enrichment_celltype=CL:0000838!3.04e-24!12;CL:0000791!2.01e-22!9;CL:0000789!2.01e-22!9;CL:0002420!2.01e-22!9;CL:0002419!2.01e-22!9;CL:0000790!2.01e-22!9;CL:0000542!3.54e-22!13;CL:0000051!3.54e-22!13;CL:0000084!6.82e-22!11;CL:0000827!6.82e-22!11;CL:0000988!2.54e-21!32;CL:0002032!2.54e-21!32;CL:0000037!2.54e-21!32;CL:0000566!2.54e-21!32;CL:0000837!2.54e-21!32;CL:0000624!4.83e-20!8;CL:0002031!1.18e-19!25;CL:0000738!2.41e-16!17;CL:0002087!2.41e-16!17;CL:0000893!1.60e-15!6;CL:0002489!1.60e-15!6;CL:0000898!1.60e-15!6;CL:0000809!1.60e-15!6;CL:0000810!1.60e-15!6;CL:0000895!1.60e-15!6;CL:0000808!1.60e-15!6;CL:0000894!1.60e-15!6;CL:0000806!1.60e-15!6;CL:0000807!1.60e-15!6;CL:0000805!1.60e-15!6;CL:0002425!1.60e-15!6;CL:0002436!1.60e-15!6;CL:0002427!1.60e-15!6;CL:0002428!1.60e-15!6;CL:0002429!1.60e-15!6;CL:0002433!1.60e-15!6;CL:0002431!1.60e-15!6;CL:0002432!1.60e-15!6;CL:0002320!1.89e-13!46;CL:0000134!1.89e-13!46;CL:0000219!8.45e-11!54;CL:0000063!3.71e-09!66;CL:0000034!3.60e-07!97|ontology_enrichment_celltype_v019_2=CL:0000791,4.03e-52,9;CL:0000789,4.03e-52,9;CL:0002420,4.03e-52,9;CL:0002419,4.03e-52,9;CL:0000790,4.03e-52,9;CL:0000838,2.45e-49,12;CL:0000542,1.65e-45,13;CL:0000051,1.65e-45,13;CL:0000624,6.08e-45,8;CL:0000084,1.38e-42,11;CL:0000827,1.38e-42,11;CL:0000738,1.10e-34,17;CL:0002087,1.10e-34,17;CL:0000893,2.39e-31,6;CL:0002489,2.39e-31,6;CL:0000898,2.39e-31,6;CL:0000809,2.39e-31,6;CL:0000810,2.39e-31,6;CL:0000895,2.39e-31,6;CL:0000808,2.39e-31,6;CL:0000894,2.39e-31,6;CL:0000806,2.39e-31,6;CL:0000807,2.39e-31,6;CL:0000805,2.39e-31,6;CL:0002425,2.39e-31,6;CL:0002436,2.39e-31,6;CL:0002427,2.39e-31,6;CL:0002428,2.39e-31,6;CL:0002429,2.39e-31,6;CL:0002433,2.39e-31,6;CL:0002431,2.39e-31,6;CL:0002432,2.39e-31,6;CL:0002031,9.88e-29,25;CL:0000988,2.70e-22,32;CL:0002032,2.70e-22,32;CL:0000037,2.70e-22,32;CL:0000837,2.70e-22,32;CL:0002320,2.83e-15,46;CL:0000134,2.83e-15,46;CL:0000219,6.89e-13,54;CL:0000034,5.48e-10,97;CL:0000625,7.41e-09,1;CL:0000945,8.81e-09,1;CL:0000236,8.81e-09,1;CL:0000826,8.81e-09,1;CL:0000815,2.06e-08,1;CL:0000792,2.06e-08,1;CL:0000723,2.89e-07,91;CL:0000048,2.89e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.64e-15!29;UBERON:0002370!1.28e-14!23;UBERON:0000974!1.28e-14!23;UBERON:0004807!1.28e-14!23;UBERON:0005058!1.28e-14!23;UBERON:0003351!1.28e-14!23;UBERON:0009113!1.28e-14!23;UBERON:0003295!1.28e-14!23;UBERON:0009722!1.28e-14!23;UBERON:0005562!1.28e-14!23;UBERON:0007690!1.28e-14!23;UBERON:0002390!1.90e-14!45;UBERON:0003061!1.90e-14!45;UBERON:0006562!6.95e-14!24;UBERON:0003408!6.95e-14!24;UBERON:0001557!6.95e-14!24;UBERON:0001042!6.95e-14!24;UBERON:0008814!6.95e-14!24;UBERON:0009145!6.95e-14!24;UBERON:0002384!1.89e-13!46;UBERON:0002193!2.93e-13!48;UBERON:0000072!5.19e-12!27;UBERON:0000063!1.33e-08!35;UBERON:0002405!1.06e-07!70;UBERON:0000065!6.21e-07!41;UBERON:0005057!6.42e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-15,46;UBERON:0002370,3.28e-08,23;UBERON:0000974,3.28e-08,23;UBERON:0004807,3.28e-08,23;UBERON:0005058,3.28e-08,23;UBERON:0003351,3.28e-08,23;UBERON:0009113,3.28e-08,23;UBERON:0003295,3.28e-08,23;UBERON:0009722,3.28e-08,23;UBERON:0005562,3.28e-08,23;UBERON:0007690,3.28e-08,23;UBERON:0006562,7.24e-08,24;UBERON:0003408,7.24e-08,24;UBERON:0001557,7.24e-08,24;UBERON:0001042,7.24e-08,24;UBERON:0008814,7.24e-08,24;UBERON:0009145,7.24e-08,24;UBERON:0000072,5.52e-07,27|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,5.490760163915,5.61754863172784,1.71217968225505,0.8774937489487,9.92964233600993,2.53519167015092,0,0.809901069559304,0,1.41957974411207,0.959801035240171,0.42438965179803,0,0,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,2.17608642603403,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,1.69978429993855,1.53946597556024,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54852925..54852936,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:54852925..54852936,- | |||
|id=chr14:54852925..54852936,- | |||
|ontology_enrichment_celltype=CL:0000838!3.04e-24!12;CL:0000791!2.01e-22!9;CL:0000789!2.01e-22!9;CL:0002420!2.01e-22!9;CL:0002419!2.01e-22!9;CL:0000790!2.01e-22!9;CL:0000542!3.54e-22!13;CL:0000051!3.54e-22!13;CL:0000084!6.82e-22!11;CL:0000827!6.82e-22!11;CL:0000988!2.54e-21!32;CL:0002032!2.54e-21!32;CL:0000037!2.54e-21!32;CL:0000566!2.54e-21!32;CL:0000837!2.54e-21!32;CL:0000624!4.83e-20!8;CL:0002031!1.18e-19!25;CL:0000738!2.41e-16!17;CL:0002087!2.41e-16!17;CL:0000893!1.60e-15!6;CL:0002489!1.60e-15!6;CL:0000898!1.60e-15!6;CL:0000809!1.60e-15!6;CL:0000810!1.60e-15!6;CL:0000895!1.60e-15!6;CL:0000808!1.60e-15!6;CL:0000894!1.60e-15!6;CL:0000806!1.60e-15!6;CL:0000807!1.60e-15!6;CL:0000805!1.60e-15!6;CL:0002425!1.60e-15!6;CL:0002436!1.60e-15!6;CL:0002427!1.60e-15!6;CL:0002428!1.60e-15!6;CL:0002429!1.60e-15!6;CL:0002433!1.60e-15!6;CL:0002431!1.60e-15!6;CL:0002432!1.60e-15!6;CL:0002320!1.89e-13!46;CL:0000134!1.89e-13!46;CL:0000219!8.45e-11!54;CL:0000063!3.71e-09!66;CL:0000034!3.60e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.03e-52,9;CL:0000789,4.03e-52,9;CL:0002420,4.03e-52,9;CL:0002419,4.03e-52,9;CL:0000790,4.03e-52,9;CL:0000838,2.45e-49,12;CL:0000542,1.65e-45,13;CL:0000051,1.65e-45,13;CL:0000624,6.08e-45,8;CL:0000084,1.38e-42,11;CL:0000827,1.38e-42,11;CL:0000738,1.10e-34,17;CL:0002087,1.10e-34,17;CL:0000893,2.39e-31,6;CL:0002489,2.39e-31,6;CL:0000898,2.39e-31,6;CL:0000809,2.39e-31,6;CL:0000810,2.39e-31,6;CL:0000895,2.39e-31,6;CL:0000808,2.39e-31,6;CL:0000894,2.39e-31,6;CL:0000806,2.39e-31,6;CL:0000807,2.39e-31,6;CL:0000805,2.39e-31,6;CL:0002425,2.39e-31,6;CL:0002436,2.39e-31,6;CL:0002427,2.39e-31,6;CL:0002428,2.39e-31,6;CL:0002429,2.39e-31,6;CL:0002433,2.39e-31,6;CL:0002431,2.39e-31,6;CL:0002432,2.39e-31,6;CL:0002031,9.88e-29,25;CL:0000988,2.70e-22,32;CL:0002032,2.70e-22,32;CL:0000037,2.70e-22,32;CL:0000837,2.70e-22,32;CL:0002320,2.83e-15,46;CL:0000134,2.83e-15,46;CL:0000219,6.89e-13,54;CL:0000034,5.48e-10,97;CL:0000625,7.41e-09,1;CL:0000945,8.81e-09,1;CL:0000236,8.81e-09,1;CL:0000826,8.81e-09,1;CL:0000815,2.06e-08,1;CL:0000792,2.06e-08,1;CL:0000723,2.89e-07,91;CL:0000048,2.89e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.64e-15!29;UBERON:0002370!1.28e-14!23;UBERON:0000974!1.28e-14!23;UBERON:0004807!1.28e-14!23;UBERON:0005058!1.28e-14!23;UBERON:0003351!1.28e-14!23;UBERON:0009113!1.28e-14!23;UBERON:0003295!1.28e-14!23;UBERON:0009722!1.28e-14!23;UBERON:0005562!1.28e-14!23;UBERON:0007690!1.28e-14!23;UBERON:0002390!1.90e-14!45;UBERON:0003061!1.90e-14!45;UBERON:0006562!6.95e-14!24;UBERON:0003408!6.95e-14!24;UBERON:0001557!6.95e-14!24;UBERON:0001042!6.95e-14!24;UBERON:0008814!6.95e-14!24;UBERON:0009145!6.95e-14!24;UBERON:0002384!1.89e-13!46;UBERON:0002193!2.93e-13!48;UBERON:0000072!5.19e-12!27;UBERON:0000063!1.33e-08!35;UBERON:0002405!1.06e-07!70;UBERON:0000065!6.21e-07!41;UBERON:0005057!6.42e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-15,46;UBERON:0002370,3.28e-08,23;UBERON:0000974,3.28e-08,23;UBERON:0004807,3.28e-08,23;UBERON:0005058,3.28e-08,23;UBERON:0003351,3.28e-08,23;UBERON:0009113,3.28e-08,23;UBERON:0003295,3.28e-08,23;UBERON:0009722,3.28e-08,23;UBERON:0005562,3.28e-08,23;UBERON:0007690,3.28e-08,23;UBERON:0006562,7.24e-08,24;UBERON:0003408,7.24e-08,24;UBERON:0001557,7.24e-08,24;UBERON:0001042,7.24e-08,24;UBERON:0008814,7.24e-08,24;UBERON:0009145,7.24e-08,24;UBERON:0000072,5.52e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,5.490760163915,5.61754863172784,1.71217968225505,0.8774937489487,9.92964233600993,2.53519167015092,0,0.809901069559304,0,1.41957974411207,0.959801035240171,0.42438965179803,0,0,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,2.17608642603403,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,1.69978429993855,1.53946597556024,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54852925..54852936,- | |||
}} |
Revision as of 02:24, 13 September 2013
Short description: | p@chr14:54852925..54852936, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54852925..54852936, - |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.83e-15 | 46 |
thymus | 3.28e-08 | 23 |
neck | 3.28e-08 | 23 |
respiratory system epithelium | 3.28e-08 | 23 |
hemolymphoid system gland | 3.28e-08 | 23 |
pharyngeal epithelium | 3.28e-08 | 23 |
thymic region | 3.28e-08 | 23 |
pharyngeal gland | 3.28e-08 | 23 |
entire pharyngeal arch endoderm | 3.28e-08 | 23 |
thymus primordium | 3.28e-08 | 23 |
early pharyngeal endoderm | 3.28e-08 | 23 |
pharynx | 7.24e-08 | 24 |
gland of gut | 7.24e-08 | 24 |
upper respiratory tract | 7.24e-08 | 24 |
chordate pharynx | 7.24e-08 | 24 |
pharyngeal arch system | 7.24e-08 | 24 |
pharyngeal region of foregut | 7.24e-08 | 24 |
segment of respiratory tract | 5.52e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.