FFCP PHASE1:Hg19::chr1:15256230..15256237,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23254|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29173|TSSclassifier=W|UniProt=B0QYQ6,Q674X7|association_with_transcript=-58bp_to_ENST00000376028,ENST00000400798,NM_001018001,uc001avp.2_5end|description=CAGE_peak_17_at_KAZN_5end|id=chr1:15256230..15256237,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0001014;3.11e-21;2!CL:0001016;3.11e-21;2!CL:0000453;2.53e-09;5!CL:0000840;5.54e-08;5|ontology_enrichment_celltype_v019_2=CL:0001014,3.11e-21,2;CL:0001016,3.11e-21,2;CL:0000453,2.53e-09,5;CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5|ontology_enrichment_development_v019=UBERON:0003124;9.91e-41;1!UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3!UBERON:0004872;5.38e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.43e-17!115;UBERON:0006331!3.89e-07!3;UBERON:0002106!8.54e-07!3;UBERON:0004854!8.54e-07!3;UBERON:0009034!8.54e-07!3;UBERON:0002095!8.54e-07!3;UBERON:0004782!8.54e-07!3;UBERON:0003281!8.54e-07!3;UBERON:0009664!8.54e-07!3;UBERON:0002296!8.54e-07!3;UBERON:0005602!8.54e-07!3;UBERON:0001179!8.54e-07!3;UBERON:0006293!8.54e-07!3|ontology_enrichment_uberon_v019=UBERON:0007029;2.21e-40;1!UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2!UBERON:0001987;2.80e-11;4!UBERON:0000014;3.42e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.48e-40,1;UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0000014,3.10e-11,4;UBERON:0001781,3.79e-11,4;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0003124,5.38e-07,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,2.04015451374069,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0|short_description=p17@KAZN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23254 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29173 | |||
|TSSclassifier=W | |||
|UniProt=B0QYQ6,Q674X7 | |||
|association_with_transcript=-58bp_to_ENST00000376028,ENST00000400798,NM_001018001,uc001avp.2_5end | |||
|description=CAGE_peak_17_at_KAZN_5end | |||
|id=chr1:15256230..15256237,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.11e-21;2!CL:0001016;3.11e-21;2!CL:0000453;2.53e-09;5!CL:0000840;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.11e-21,2;CL:0001016,3.11e-21,2;CL:0000453,2.53e-09,5;CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.91e-41;1!UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3!UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-17!115;UBERON:0006331!3.89e-07!3;UBERON:0002106!8.54e-07!3;UBERON:0004854!8.54e-07!3;UBERON:0009034!8.54e-07!3;UBERON:0002095!8.54e-07!3;UBERON:0004782!8.54e-07!3;UBERON:0003281!8.54e-07!3;UBERON:0009664!8.54e-07!3;UBERON:0002296!8.54e-07!3;UBERON:0005602!8.54e-07!3;UBERON:0001179!8.54e-07!3;UBERON:0006293!8.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.21e-40;1!UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2!UBERON:0001987;2.80e-11;4!UBERON:0000014;3.42e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.48e-40,1;UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0000014,3.10e-11,4;UBERON:0001781,3.79e-11,4;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0003124,5.38e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,2.04015451374069,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@KAZN | |||
}} |
Revision as of 00:26, 12 September 2013
Short description: | p17@KAZN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_KAZN_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000376028, ENST00000400798, NM_001018001, uc001avp.2_5end |
EntrezGene: | KAZN |
HGNC: | 29173 |
UniProt: | B0QYQ6Q674X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.11e-21 | 2 |
immature CD1a-positive Langerhans cell | 3.11e-21 | 2 |
Langerhans cell | 2.53e-09 | 5 |
immature conventional dendritic cell | 5.54e-08 | 5 |
common dendritic progenitor | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 1.48e-40 | 1 |
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
zone of skin | 3.10e-11 | 4 |
layer of retina | 3.79e-11 | 4 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
chorion | 5.38e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.