FFCP PHASE1:Hg19::chr10:3985125..3985162,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C12|description=CAGE_peak_at_chr10:3985125..3985162,+|id=chr10:3985125..3985162,+|ontology_enrichment_celltype=CL:0002274!5.61e-09!5;CL:0000457!5.61e-09!5;CL:0002191!5.61e-09!5;CL:0000097!5.61e-09!5;CL:0000831!5.61e-09!5;CL:0002028!5.61e-09!5;CL:0000244!9.06e-08!4;CL:0000731!9.06e-08!4|ontology_enrichment_celltype_v019=CL:0000244;2.32e-22;4!CL:0000731;2.32e-22;4!CL:0000097;5.21e-18;5!CL:0000349;2.42e-17;19!CL:0002536;5.82e-12;2!CL:0000317;2.48e-11;2!CL:1000448;2.48e-11;2!CL:0002308;2.48e-11;2!CL:0002140;2.48e-11;2!CL:0002537;1.29e-10;5!CL:0000163;4.72e-10;9!CL:0002159;5.08e-09;14!CL:0002577;3.43e-08;3!CL:0002166;7.72e-08;3!CL:1001319;9.48e-07;1!CL:1000600;9.48e-07;1|ontology_enrichment_celltype_v019_2=CL:0000244,2.26e-22,4;CL:0000731,2.26e-22,4;CL:0000097,4.39e-18,5;CL:0002028,4.39e-18,5;CL:0000349,2.39e-17,19;CL:0002536,6.15e-12,2;CL:0000317,2.35e-11,2;CL:1000448,2.35e-11,2;CL:0002308,2.35e-11,2;CL:0002140,2.35e-11,2;CL:0002537,1.18e-10,5;CL:0000163,4.30e-10,9;CL:0002159,4.82e-09,14;CL:0002577,3.55e-08,3;CL:0002166,6.49e-08,3;CL:1001319,9.48e-07,1;CL:1000600,9.48e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;7.72e-08;3!DOID:127;7.72e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,7.72e-08,3;DOID:127,7.72e-08,3|ontology_enrichment_uberon=UBERON:0005631!6.94e-13!14;UBERON:0000158!6.94e-13!14;UBERON:0005910!2.49e-10!6;UBERON:0000365!2.87e-09!5;UBERON:0000478!1.27e-08!24;UBERON:0003124!3.94e-08!7|ontology_enrichment_uberon_v019=UBERON:0000365;2.15e-27;5!UBERON:0005910;8.42e-23;6!UBERON:0000305;1.26e-19;7!UBERON:0005631;1.93e-19;10!UBERON:0000158;1.93e-19;10!UBERON:0000478;1.81e-13;24!UBERON:0001255;1.80e-11;2!UBERON:0001556;1.80e-11;2!UBERON:0002419;2.48e-11;2!UBERON:0007771;2.48e-11;2!UBERON:0003297;2.48e-11;2!UBERON:0001821;2.48e-11;2!UBERON:0003487;2.48e-11;2!UBERON:0001820;2.48e-11;2!UBERON:0000486;2.76e-11;12!UBERON:0004645;9.48e-07;1!UBERON:0001256;9.48e-07;1!UBERON:0001259;9.48e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.10e-27,5;UBERON:0005631,5.48e-24,14;UBERON:0000158,5.48e-24,14;UBERON:0005910,8.24e-23,6;UBERON:0000305,1.17e-19,7;UBERON:0004871,3.57e-17,8;UBERON:0000478,1.80e-13,24;UBERON:0001255,1.38e-11,2;UBERON:0001556,1.38e-11,2;UBERON:0002419,2.35e-11,2;UBERON:0007771,2.35e-11,2;UBERON:0003297,2.35e-11,2;UBERON:0001821,2.35e-11,2;UBERON:0003487,2.35e-11,2;UBERON:0001820,2.35e-11,2;UBERON:0005089,2.35e-11,2;UBERON:0005088,2.35e-11,2;UBERON:0006554,9.59e-08,47;UBERON:0003124,1.42e-07,7;UBERON:0001008,1.49e-07,48;UBERON:0004645,9.48e-07,1;UBERON:0001256,9.48e-07,1;UBERON:0001259,9.48e-07,1|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,5.02415155899396,5.27533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,2.00538822393312,1.17842362989935,0.221533894583621,0.812411591295047,1.28091319725675,2.34106825607781,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,1.30216690771284,0,0.752875595388864,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0.717558542755448,0,0,0.300091096084402,0,0,0,2.19409231913646,0.584622030967192,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,1.30977727695932,0,0.773043412653187,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10581869652794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,2.18376766658517,0.283550194484773,0,0,0,0.492663237895943,1.40877494421162,83.9678867940127,26.9504312889718,68.4233989170979,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,5.15316871458641,0,3.32629322662648,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr10:3985125..3985162,+ | |||
|id=chr10:3985125..3985162,+ | |||
|ontology_enrichment_celltype=CL:0002274!5.61e-09!5;CL:0000457!5.61e-09!5;CL:0002191!5.61e-09!5;CL:0000097!5.61e-09!5;CL:0000831!5.61e-09!5;CL:0002028!5.61e-09!5;CL:0000244!9.06e-08!4;CL:0000731!9.06e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.32e-22;4!CL:0000731;2.32e-22;4!CL:0000097;5.21e-18;5!CL:0000349;2.42e-17;19!CL:0002536;5.82e-12;2!CL:0000317;2.48e-11;2!CL:1000448;2.48e-11;2!CL:0002308;2.48e-11;2!CL:0002140;2.48e-11;2!CL:0002537;1.29e-10;5!CL:0000163;4.72e-10;9!CL:0002159;5.08e-09;14!CL:0002577;3.43e-08;3!CL:0002166;7.72e-08;3!CL:1001319;9.48e-07;1!CL:1000600;9.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.26e-22,4;CL:0000731,2.26e-22,4;CL:0000097,4.39e-18,5;CL:0002028,4.39e-18,5;CL:0000349,2.39e-17,19;CL:0002536,6.15e-12,2;CL:0000317,2.35e-11,2;CL:1000448,2.35e-11,2;CL:0002308,2.35e-11,2;CL:0002140,2.35e-11,2;CL:0002537,1.18e-10,5;CL:0000163,4.30e-10,9;CL:0002159,4.82e-09,14;CL:0002577,3.55e-08,3;CL:0002166,6.49e-08,3;CL:1001319,9.48e-07,1;CL:1000600,9.48e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.72e-08;3!DOID:127;7.72e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.72e-08,3;DOID:127,7.72e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.94e-13!14;UBERON:0000158!6.94e-13!14;UBERON:0005910!2.49e-10!6;UBERON:0000365!2.87e-09!5;UBERON:0000478!1.27e-08!24;UBERON:0003124!3.94e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.15e-27;5!UBERON:0005910;8.42e-23;6!UBERON:0000305;1.26e-19;7!UBERON:0005631;1.93e-19;10!UBERON:0000158;1.93e-19;10!UBERON:0000478;1.81e-13;24!UBERON:0001255;1.80e-11;2!UBERON:0001556;1.80e-11;2!UBERON:0002419;2.48e-11;2!UBERON:0007771;2.48e-11;2!UBERON:0003297;2.48e-11;2!UBERON:0001821;2.48e-11;2!UBERON:0003487;2.48e-11;2!UBERON:0001820;2.48e-11;2!UBERON:0000486;2.76e-11;12!UBERON:0004645;9.48e-07;1!UBERON:0001256;9.48e-07;1!UBERON:0001259;9.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.10e-27,5;UBERON:0005631,5.48e-24,14;UBERON:0000158,5.48e-24,14;UBERON:0005910,8.24e-23,6;UBERON:0000305,1.17e-19,7;UBERON:0004871,3.57e-17,8;UBERON:0000478,1.80e-13,24;UBERON:0001255,1.38e-11,2;UBERON:0001556,1.38e-11,2;UBERON:0002419,2.35e-11,2;UBERON:0007771,2.35e-11,2;UBERON:0003297,2.35e-11,2;UBERON:0001821,2.35e-11,2;UBERON:0003487,2.35e-11,2;UBERON:0001820,2.35e-11,2;UBERON:0005089,2.35e-11,2;UBERON:0005088,2.35e-11,2;UBERON:0006554,9.59e-08,47;UBERON:0003124,1.42e-07,7;UBERON:0001008,1.49e-07,48;UBERON:0004645,9.48e-07,1;UBERON:0001256,9.48e-07,1;UBERON:0001259,9.48e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,5.02415155899396,5.27533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.863077176966451,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,2.00538822393312,1.17842362989935,0.221533894583621,0.812411591295047,1.28091319725675,2.34106825607781,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,1.30216690771284,0,0.752875595388864,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0.717558542755448,0,0,0.300091096084402,0,0,0,2.19409231913646,0.584622030967192,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,1.30977727695932,0,0.773043412653187,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10581869652794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,2.18376766658517,0.283550194484773,0,0,0,0.492663237895943,1.40877494421162,83.9678867940127,26.9504312889718,68.4233989170979,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,5.15316871458641,0,3.32629322662648,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44404298136984,8.42357378338128,6.65145230305014,19.0670422171776,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,49.4201083407018,2.96964680832639,70.3398007807241,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,1.479651084554,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1650405906172,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82672910881823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,11.1893381365993,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0.558564802544508,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,0,1.30634944043764,0,0.656740165994712,25.7285912895987,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0,0.0657727735628491,0,0,1.0989032999072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0.143444410785353,0,4.8027928480475,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3985125..3985162,+ | |||
}} |
Revision as of 13:23, 10 September 2013
Short description: | p@chr10:3985125..3985162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3985125..3985162, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.26e-22 | 4 |
urothelial cell | 2.26e-22 | 4 |
mast cell | 4.39e-18 | 5 |
basophil mast progenitor cell | 4.39e-18 | 5 |
extraembryonic cell | 2.39e-17 | 19 |
amniotic epithelial cell | 6.15e-12 | 2 |
sebum secreting cell | 2.35e-11 | 2 |
epithelial cell of sweat gland | 2.35e-11 | 2 |
epithelial cell of skin gland | 2.35e-11 | 2 |
acinar cell of sebaceous gland | 2.35e-11 | 2 |
amnion mesenchymal stem cell | 1.18e-10 | 5 |
endocrine cell | 4.30e-10 | 9 |
general ecto-epithelial cell | 4.82e-09 | 14 |
placental epithelial cell | 3.55e-08 | 3 |
epithelial cell of Malassez | 6.49e-08 | 3 |
bladder cell | 9.48e-07 | 1 |
lower urinary tract cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.10e-27 | 5 |
extraembryonic membrane | 5.48e-24 | 14 |
membranous layer | 5.48e-24 | 14 |
transitional epithelium | 8.24e-23 | 6 |
amnion | 1.17e-19 | 7 |
somatic layer of lateral plate mesoderm | 3.57e-17 | 8 |
extraembryonic structure | 1.80e-13 | 24 |
urinary bladder | 1.38e-11 | 2 |
lower urinary tract | 1.38e-11 | 2 |
skin gland | 2.35e-11 | 2 |
epidermis gland | 2.35e-11 | 2 |
gland of integumental system | 2.35e-11 | 2 |
sebaceous gland | 2.35e-11 | 2 |
skin sebaceous gland | 2.35e-11 | 2 |
sweat gland | 2.35e-11 | 2 |
sweat gland placode | 2.35e-11 | 2 |
sebaceous gland placode | 2.35e-11 | 2 |
urinary system structure | 9.59e-08 | 47 |
chorion | 1.42e-07 | 7 |
renal system | 1.49e-07 | 48 |
urinary bladder urothelium | 9.48e-07 | 1 |
wall of urinary bladder | 9.48e-07 | 1 |
mucosa of urinary bladder | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.72e-08 | 3 |
leiomyoma | 7.72e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.