FFCP PHASE1:Hg19::chr19:6591191..6591209,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11937|TSSclassifier=S|UniProt=P32970,Q53XX4|association_with_transcript=-28bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end|coexpression_cluster_id=C1828|description=CAGE_peak_5_at_CD70_5end|id=chr19:6591191..6591209,-|ontology_enrichment_celltype=CL:0000945!5.31e-10!24;CL:0000826!5.31e-10!24;CL:1000497!5.40e-08!18;CL:0002518!5.40e-08!18|ontology_enrichment_celltype_v019=CL:0000945;1.34e-08;24!CL:0002178;1.55e-07;3!CL:1000497;5.44e-07;17!CL:0002518;5.44e-07;17|ontology_enrichment_celltype_v019_2=CL:0000945,1.19e-08,24;CL:0000826,1.19e-08,24;CL:0002178,1.57e-07,3;CL:1000497,5.73e-07,17;CL:0002518,5.73e-07,17|ontology_enrichment_development_v019=UBERON:0008947;4.77e-08;29|ontology_enrichment_disease=DOID:14566!4.99e-22!239;DOID:162!2.08e-21!235;DOID:0050686!7.88e-12!137;DOID:2531!1.54e-09!51;DOID:0060083!1.54e-09!51;DOID:305!7.01e-09!106;DOID:0050687!6.84e-08!143;DOID:0060058!4.08e-07!10|ontology_enrichment_disease_v019=DOID:0060058;3.33e-10;10|ontology_enrichment_disease_v019_2=DOID:14566,4.89e-19,239;DOID:162,8.66e-18,235;DOID:0050686,2.58e-11,137;DOID:0060058,3.57e-10,10;DOID:2531,1.13e-09,51;DOID:0060083,1.13e-09,51;DOID:0050687,1.63e-07,143|ontology_enrichment_uberon=UBERON:0001737!3.25e-12!9;UBERON:0002113!2.22e-09!27;UBERON:0003918!2.22e-09!27;UBERON:0005095!2.22e-09!27;UBERON:0007687!2.22e-09!27;UBERON:0000489!4.24e-07!32;UBERON:0001557!7.05e-07!19;UBERON:0003887!7.22e-07!21|ontology_enrichment_uberon_v019=UBERON:0001737;9.48e-22;9!UBERON:0001557;9.48e-22;9!UBERON:0002113;7.23e-09;24!UBERON:0011143;7.23e-09;24!UBERON:0000489;6.14e-07;29|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.97e-22,9;UBERON:0001557,3.29e-09,19;UBERON:0002113,5.97e-08,26;UBERON:0003918,5.97e-08,26;UBERON:0011143,5.97e-08,26;UBERON:0005095,5.97e-08,26;UBERON:0007687,5.97e-08,26|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,2.9801228241701,3.11982239909794,2.44003422072406,0,0,0,0,0,0,1.00707360754392,6.39761546193397,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0.668745981562712,0,0,0,2.22820913770347,0,0,0,3.84273959177025,3.77172107923647,1.31550323682941,0.829050053357545,0.869409257205157,0,0,0,0.906474741580529,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,11.5940664039047,8.93498857413939,7.47134192638794,11.9117490550985,7.84365998732662,6.8808479542218,15.3707691302587,11.7732879075208,7.31019598198142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,1.20137223137567,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,2.35304930753057,0,0.844413031143006,0,0.170093705276516,2.37507507712353,3.08454505380579,1.89662506280697,1.00337954770971,0.764628819135115,0,2.46262230194396,0,0,0,0,0,0,3.75434805755208,3.21787049690293,0,0,0,0.580024309752732,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0.245040215981032,1.67222857613147,0.577076851905779,0,0.159426272728822,0,0.191505370132367,0,0,0,0.456469358066384,0,2.50634477090067,0,0.321176150207399,1.41259795033733,8.94277099149685,0,6.45205605047762,7.82866377623456,8.00875880217161,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,14.5990833403497,3.69376990848337,0,0,0,0,0,0.445234820091624,0,0.422250816255987,0,0,0,0,2.70786572014353,0,0,0,3.5810065915881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.843992258112108,0,0,0,0,0,0,4.74433805888995,5.80750513048563,4.38572187922913,0,0,0,0.91227394607833,2.15231080825299,0,0,0,0,0,8.86908174545506,0.414752765588989,0.664653872707185,0.992975867626496,0.627865836814451,0,0,0,0,0.293977192243133,0.435296032902013,0,26.3138629681573,0,0,0,0.0969890164884194,1.235585773681,0,1.50746117111426,0,0,0,0.0801588202515337,0,6.19409789704604,6.33997835478066,0.687219576995494,0,0.14405479798815,0.248505071130865,0,1.35904206073614,1.569042694685,1.01998217636322,0,0,0,0,0,1.57732412567589,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,1.86281330544726,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0.316801009558219,5.73719485865103,0,0,0,4.32256514013075,0,0,0,1.19730191562487,0.082092520749339,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,16.5993770794273,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,2.49960815924213,0,0,40.9362526274819,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0,0,0,0.318593534327405,0.449803112163605,1.08684069813382,0,0,0,0,0,0.813741466409323,0,0.966695013382396,0,0,0,0,0,1.26184898228651,15.9874459238062,0,0,0,3.00979216620984,0.244736704506468,0.358177682162975,0.308801447160972,0,2.12026975135057,0.192914038270915,0,5.89355492752277,3.45430341731199,0.607719912354764,0,0,0.664324201566815,0.490696182767533,4.25892803500336,0,0,3.39978572953381,2.66729324235352,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,4.57658514560601,17.9493580775626,0,0,2.82387096184928,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,5.5312314026774,0.857440047187092,0,0,3.07303986298317,0.111231401892069,0,0,0,0,4.96633459802829,10.9882888214022,0,0,0,0,0,1.03608082081518,1.7071847709395,0.691259661814092,0,5.44327203360601,6.30579195217767,0,2.2910686854405,23.5756853104883,27.7106292303456,0,1.47225350422864,0,0,0,0,0,0.233939463462106,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,8.89476287731867,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,12.6814961358086,0,0,0,0,0,0,0,0,0,2.57903283935411,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,4.48795889224526|short_description=p5@CD70}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |||
|TSSclassifier=S | |||
|UniProt=P32970,Q53XX4 | |||
|association_with_transcript=-28bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | |||
|coexpression_cluster_id=C1828 | |||
|description=CAGE_peak_5_at_CD70_5end | |||
|id=chr19:6591191..6591209,- | |||
|ontology_enrichment_celltype=CL:0000945!5.31e-10!24;CL:0000826!5.31e-10!24;CL:1000497!5.40e-08!18;CL:0002518!5.40e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-08;24!CL:0002178;1.55e-07;3!CL:1000497;5.44e-07;17!CL:0002518;5.44e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.19e-08,24;CL:0000826,1.19e-08,24;CL:0002178,1.57e-07,3;CL:1000497,5.73e-07,17;CL:0002518,5.73e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.77e-08;29 | |||
|ontology_enrichment_disease=DOID:14566!4.99e-22!239;DOID:162!2.08e-21!235;DOID:0050686!7.88e-12!137;DOID:2531!1.54e-09!51;DOID:0060083!1.54e-09!51;DOID:305!7.01e-09!106;DOID:0050687!6.84e-08!143;DOID:0060058!4.08e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.33e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.89e-19,239;DOID:162,8.66e-18,235;DOID:0050686,2.58e-11,137;DOID:0060058,3.57e-10,10;DOID:2531,1.13e-09,51;DOID:0060083,1.13e-09,51;DOID:0050687,1.63e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.25e-12!9;UBERON:0002113!2.22e-09!27;UBERON:0003918!2.22e-09!27;UBERON:0005095!2.22e-09!27;UBERON:0007687!2.22e-09!27;UBERON:0000489!4.24e-07!32;UBERON:0001557!7.05e-07!19;UBERON:0003887!7.22e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.48e-22;9!UBERON:0001557;9.48e-22;9!UBERON:0002113;7.23e-09;24!UBERON:0011143;7.23e-09;24!UBERON:0000489;6.14e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.97e-22,9;UBERON:0001557,3.29e-09,19;UBERON:0002113,5.97e-08,26;UBERON:0003918,5.97e-08,26;UBERON:0011143,5.97e-08,26;UBERON:0005095,5.97e-08,26;UBERON:0007687,5.97e-08,26 | |||
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|short_description=p5@CD70 | |||
}} |
Revision as of 22:47, 11 September 2013
Short description: | p5@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CD70_5end |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | -28bp_to_ENST00000245903, NM_001252, uc002mfi.2, uc010xjf.1_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | P32970Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.19e-08 | 24 |
pro-B cell | 1.19e-08 | 24 |
epithelial cell of stomach | 1.57e-07 | 3 |
kidney cell | 5.73e-07 | 17 |
kidney epithelial cell | 5.73e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.97e-22 | 9 |
upper respiratory tract | 3.29e-09 | 19 |
kidney | 5.97e-08 | 26 |
kidney mesenchyme | 5.97e-08 | 26 |
upper urinary tract | 5.97e-08 | 26 |
kidney rudiment | 5.97e-08 | 26 |
kidney field | 5.97e-08 | 26 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.89e-19 | 239 |
cancer | 8.66e-18 | 235 |
organ system cancer | 2.58e-11 | 137 |
lymphoma | 3.57e-10 | 10 |
hematologic cancer | 1.13e-09 | 51 |
immune system cancer | 1.13e-09 | 51 |
cell type cancer | 1.63e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.