FFCP PHASE1:Hg19::chr19:45582497..45582551,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20045 | |||
|TSSclassifier=S | |||
|UniProt=Q9H840 | |||
|association_with_transcript=0bp_to_ENST00000270257,ENST00000391951,NM_001007269,NM_001007270,NM_024707,uc002pap.1,uc002paq.1,uc002par.1_5end | |||
|coexpression_cluster_id=C685 | |||
|description=CAGE_peak_1_at_GEMIN7_5end | |||
|id=chr19:45582497..45582551,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.99e-20!248;CL:0000220!1.22e-19!246;CL:0000548!6.87e-17!679;CL:0000004!6.87e-17!679;CL:0000255!6.87e-17!679;CL:0000012!2.76e-16!682;CL:0000222!1.18e-14!119;CL:0000144!7.81e-14!625;CL:0000055!2.62e-13!180;CL:0000066!3.21e-13!254;CL:0000003!4.77e-12!722;CL:0002371!3.05e-10!591;CL:0000183!9.16e-10!59;CL:0000393!2.60e-08!60;CL:0000211!2.60e-08!60;CL:0000192!5.33e-08!42;CL:0000514!5.33e-08!42;CL:0000187!1.57e-07!54;CL:0000680!1.60e-07!57;CL:0000056!1.60e-07!57;CL:0000355!1.60e-07!57;CL:1000449!2.28e-07!16;CL:0000359!2.63e-07!32;CL:1000497!3.19e-07!18;CL:0002518!3.19e-07!18;CL:0000213!3.55e-07!57;CL:0000215!3.55e-07!57;CL:0002078!4.58e-07!44;CL:0000115!6.19e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.69e-07;15!CL:1000497;2.88e-07;17!CL:0002518;2.88e-07;17!CL:0000359;7.43e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.08e-20,250;CL:0000222,4.43e-15,121;CL:0000066,3.51e-13,253;CL:0000393,2.67e-08,61;CL:0000211,2.67e-08,61;CL:0000192,5.79e-08,43;CL:0000514,5.79e-08,43;CL:1000449,1.43e-07,15;CL:0000213,1.45e-07,58;CL:0000215,1.45e-07,58;CL:0000187,1.61e-07,55;CL:0000680,1.63e-07,58;CL:0000056,1.63e-07,58;CL:0000355,1.63e-07,58;CL:0002078,1.75e-07,45;CL:1000497,2.18e-07,17;CL:0002518,2.18e-07,17;CL:0000115,2.22e-07,36;CL:0000359,2.63e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;1.19e-07;24!UBERON:0011143;1.19e-07;24!UBERON:0000353;1.56e-07;15!UBERON:0006555;1.69e-07;15!UBERON:0004819;1.69e-07;15!UBERON:0001285;1.69e-07;15!UBERON:0007684;1.69e-07;15!UBERON:0003914;2.64e-07;74!UBERON:0006554;6.30e-07;30!UBERON:0001008;6.30e-07;30 | |||
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| |||
|short_description=p1@GEMIN7 | |||
}} |
Revision as of 21:11, 11 September 2013
Short description: | p1@GEMIN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GEMIN7_5end |
Coexpression cluster: | C685_Alveolar_Mesenchymal_Renal_Smooth_Hepatic_Fibroblast_Keratocytes |
Association with transcript: | 0bp_to_ENST00000270257, ENST00000391951, NM_001007269, NM_001007270, NM_024707, uc002pap.1, uc002paq.1, uc002par.1_5end |
EntrezGene: | GEMIN7 |
HGNC: | 20045 |
UniProt: | Q9H840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.08e-20 | 250 |
mesodermal cell | 4.43e-15 | 121 |
epithelial cell | 3.51e-13 | 253 |
electrically responsive cell | 2.67e-08 | 61 |
electrically active cell | 2.67e-08 | 61 |
smooth muscle cell | 5.79e-08 | 43 |
smooth muscle myoblast | 5.79e-08 | 43 |
epithelial cell of nephron | 1.43e-07 | 15 |
lining cell | 1.45e-07 | 58 |
barrier cell | 1.45e-07 | 58 |
muscle cell | 1.61e-07 | 55 |
muscle precursor cell | 1.63e-07 | 58 |
myoblast | 1.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-07 | 58 |
meso-epithelial cell | 1.75e-07 | 45 |
kidney cell | 2.18e-07 | 17 |
kidney epithelial cell | 2.18e-07 | 17 |
endothelial cell | 2.22e-07 | 36 |
vascular associated smooth muscle cell | 2.63e-07 | 32 |
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