FFCP PHASE1:Hg19::chr5:138678179..138678199,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51247|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17970|TSSclassifier=S|UniProt=|association_with_transcript=39bp_to_ENST00000510080_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_PAIP2_5end|id=chr5:138678179..138678199,+|ontology_enrichment_celltype=CL:0000838!1.11e-12!52;CL:0000791!1.92e-12!18;CL:0000789!1.92e-12!18;CL:0002420!1.92e-12!18;CL:0002419!1.92e-12!18;CL:0000790!1.92e-12!18;CL:0000542!2.58e-12!53;CL:0000051!2.58e-12!53;CL:0000084!7.13e-11!25;CL:0000827!7.13e-11!25;CL:0002087!1.51e-08!119;CL:0000738!2.69e-08!140;CL:0002031!8.44e-08!124;CL:0000625!2.83e-07!11;CL:0002032!8.58e-07!165;CL:0000837!8.58e-07!165|ontology_enrichment_celltype_v019=CL:0000895;7.06e-34;1!CL:0000898;2.89e-12;3!CL:0000623;2.89e-12;3!CL:0000624;8.97e-07;6|ontology_enrichment_celltype_v019_2=CL:0000810,5.05e-34,1;CL:0000895,5.05e-34,1;CL:0002436,5.05e-34,1;CL:0002427,5.05e-34,1;CL:0002428,5.05e-34,1;CL:0002429,5.05e-34,1;CL:0002433,5.05e-34,1;CL:0002431,5.05e-34,1;CL:0002432,5.05e-34,1;CL:0000893,9.07e-18,2;CL:0002489,9.07e-18,2;CL:0000809,9.07e-18,2;CL:0000808,9.07e-18,2;CL:0000894,9.07e-18,2;CL:0000806,9.07e-18,2;CL:0000807,9.07e-18,2;CL:0000805,9.07e-18,2;CL:0002425,9.07e-18,2;CL:0000898,2.59e-12,3;CL:0000623,2.89e-12,3;CL:0000825,2.89e-12,3;CL:0000624,8.48e-07,6|ontology_enrichment_development_v019=CL:0002427;7.06e-34;1!CL:0002425;1.07e-17;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0002370,1.44e-09,4;UBERON:0005058,1.44e-09,4;UBERON:0009113,1.44e-09,4;UBERON:0003295,1.44e-09,4;UBERON:0005562,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0003351,8.48e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.296573126324121,0,0,0,1.14966148080576,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,1.07813787429759,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51247 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17970 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000510080_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PAIP2_5end | |||
|id=chr5:138678179..138678199,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.11e-12!52;CL:0000791!1.92e-12!18;CL:0000789!1.92e-12!18;CL:0002420!1.92e-12!18;CL:0002419!1.92e-12!18;CL:0000790!1.92e-12!18;CL:0000542!2.58e-12!53;CL:0000051!2.58e-12!53;CL:0000084!7.13e-11!25;CL:0000827!7.13e-11!25;CL:0002087!1.51e-08!119;CL:0000738!2.69e-08!140;CL:0002031!8.44e-08!124;CL:0000625!2.83e-07!11;CL:0002032!8.58e-07!165;CL:0000837!8.58e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000895;7.06e-34;1!CL:0000898;2.89e-12;3!CL:0000623;2.89e-12;3!CL:0000624;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,5.05e-34,1;CL:0000895,5.05e-34,1;CL:0002436,5.05e-34,1;CL:0002427,5.05e-34,1;CL:0002428,5.05e-34,1;CL:0002429,5.05e-34,1;CL:0002433,5.05e-34,1;CL:0002431,5.05e-34,1;CL:0002432,5.05e-34,1;CL:0000893,9.07e-18,2;CL:0002489,9.07e-18,2;CL:0000809,9.07e-18,2;CL:0000808,9.07e-18,2;CL:0000894,9.07e-18,2;CL:0000806,9.07e-18,2;CL:0000807,9.07e-18,2;CL:0000805,9.07e-18,2;CL:0002425,9.07e-18,2;CL:0000898,2.59e-12,3;CL:0000623,2.89e-12,3;CL:0000825,2.89e-12,3;CL:0000624,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002427;7.06e-34;1!CL:0002425;1.07e-17;2!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0002370,1.44e-09,4;UBERON:0005058,1.44e-09,4;UBERON:0009113,1.44e-09,4;UBERON:0003295,1.44e-09,4;UBERON:0005562,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0003351,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.296573126324121,0,0,0,1.14966148080576,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,1.07813787429759,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0,0.107824811396682,0,0.109209638192014,0,0.425149840203366,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,5.75918106458619,8.03892390468535,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0.320568492303233 | |||
|short_description=p3@PAIP2 | |||
}} |
Revision as of 13:27, 13 September 2013
Short description: | p3@PAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PAIP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 39bp_to_ENST00000510080_5end |
EntrezGene: | PAIP2 |
HGNC: | 17970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 5.05e-34 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.05e-34 | 1 |
mature CD4 single-positive thymocyte | 5.05e-34 | 1 |
resting double-positive thymocyte | 5.05e-34 | 1 |
double-positive blast | 5.05e-34 | 1 |
CD69-positive double-positive thymocyte | 5.05e-34 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.05e-34 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.05e-34 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.05e-34 | 1 |
thymocyte | 9.07e-18 | 2 |
double negative thymocyte | 9.07e-18 | 2 |
double-positive, alpha-beta thymocyte | 9.07e-18 | 2 |
DN4 thymocyte | 9.07e-18 | 2 |
DN1 thymic pro-T cell | 9.07e-18 | 2 |
DN2 thymocyte | 9.07e-18 | 2 |
DN3 thymocyte | 9.07e-18 | 2 |
immature single positive thymocyte | 9.07e-18 | 2 |
early T lineage precursor | 9.07e-18 | 2 |
naive T cell | 2.59e-12 | 3 |
natural killer cell | 2.89e-12 | 3 |
pro-NK cell | 2.89e-12 | 3 |
CD4-positive, alpha-beta T cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
thymus | 1.44e-09 | 4 |
hemolymphoid system gland | 1.44e-09 | 4 |
thymic region | 1.44e-09 | 4 |
pharyngeal gland | 1.44e-09 | 4 |
thymus primordium | 1.44e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
pharyngeal epithelium | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.