FFCP PHASE1:Hg19::chr6:12012518..12012531,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3096|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4920|TSSclassifier=S|UniProt=P15822|association_with_transcript=-39bp_to_ENST00000379388_5end|description=CAGE_peak_7_at_HIVEP1_5end|id=chr6:12012518..12012531,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;1.07e-10;3!CL:0000081;2.03e-10;11!CL:0000094;3.10e-10;8!CL:0000771;1.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0000775,6.62e-11,3;CL:0000081,1.62e-10,11;CL:0000094,2.32e-10,8;CL:0000771,1.28e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!7.63e-10!86;UBERON:0000073!1.07e-09!94;UBERON:0001016!1.07e-09!94;UBERON:0001017!1.24e-09!82;UBERON:0000955!3.68e-09!69;UBERON:0006238!3.68e-09!69;UBERON:0000956!9.09e-09!25;UBERON:0000203!9.09e-09!25;UBERON:0002619!2.95e-08!22;UBERON:0001950!4.48e-08!20;UBERON:0001049!1.30e-07!57;UBERON:0005068!1.30e-07!57;UBERON:0006241!1.30e-07!57;UBERON:0007135!1.30e-07!57;UBERON:0003080!2.37e-07!42;UBERON:0002616!2.55e-07!59;UBERON:0002780!4.71e-07!41;UBERON:0001890!4.71e-07!41;UBERON:0006240!4.71e-07!41;UBERON:0003075!4.94e-07!86;UBERON:0007284!4.94e-07!86;UBERON:0001869!7.70e-07!32|ontology_enrichment_uberon_v019=UBERON:0001950;1.67e-10;20!UBERON:0002619;1.93e-09;22!UBERON:0000956;3.72e-08;25!UBERON:0000203;3.72e-08;25!UBERON:0003296;8.86e-08;4!UBERON:0010133;8.86e-08;4!UBERON:0000007;1.56e-07;2!UBERON:0001869;3.58e-07;32!UBERON:0002360;4.36e-07;2!UBERON:0000094;4.36e-07;2!UBERON:0010743;4.36e-07;2!UBERON:0002780;5.17e-07;41!UBERON:0001890;5.17e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.97e-11,81;UBERON:0001950,2.69e-10,20;UBERON:0002780,1.52e-09,41;UBERON:0001890,1.52e-09,41;UBERON:0003080,1.52e-09,41;UBERON:0006240,1.52e-09,41;UBERON:0001016,1.84e-09,89;UBERON:0000073,2.97e-09,53;UBERON:0002616,2.97e-09,53;UBERON:0002619,2.97e-09,22;UBERON:0003056,6.14e-09,61;UBERON:0001049,1.37e-08,56;UBERON:0005068,1.37e-08,56;UBERON:0006241,1.37e-08,56;UBERON:0007135,1.37e-08,56;UBERON:0000955,1.47e-08,68;UBERON:0006238,1.47e-08,68;UBERON:0000956,5.38e-08,25;UBERON:0000203,5.38e-08,25;UBERON:0003296,7.30e-08,4;UBERON:0010133,7.30e-08,4;UBERON:0003075,1.33e-07,82;UBERON:0007284,1.33e-07,82;UBERON:0000007,1.95e-07,2;UBERON:0001869,2.30e-07,32;UBERON:0002346,4.52e-07,86;UBERON:0001893,7.75e-07,34|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0,0.85870796139317,0.273748850145768,0.627713197974014,0.305653622991805,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.232401601740905,0.710846162437108,0,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,1.93645405075148,2.70852973188684,0,0.272906150057846,0.898893937780338,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,1.70215567407342,0,0,0,0.868755378820466,0.605399502633369,1.10483290796269,0.949387162322653,0,0,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.511450247374121,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.661743720148475,1.77383517970051,0.43917392846563,0.458426764241994,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0.715471872916026,1.71598473234038,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,3.87780264148325,0,1.49091585508596,0.506522046658319,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0.538168907066586,0,0.211931901159562,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.795178609928912,0.348581828608555,0.725627385107593,1.51392510525377,1.09493207722749,0,0.643240938192885,0,0,0,0.354920400119532,0.505754070234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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4920 | |||
|TSSclassifier=S | |||
|UniProt=P15822 | |||
|association_with_transcript=-39bp_to_ENST00000379388_5end | |||
|description=CAGE_peak_7_at_HIVEP1_5end | |||
|id=chr6:12012518..12012531,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.07e-10;3!CL:0000081;2.03e-10;11!CL:0000094;3.10e-10;8!CL:0000771;1.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.62e-11,3;CL:0000081,1.62e-10,11;CL:0000094,2.32e-10,8;CL:0000771,1.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.63e-10!86;UBERON:0000073!1.07e-09!94;UBERON:0001016!1.07e-09!94;UBERON:0001017!1.24e-09!82;UBERON:0000955!3.68e-09!69;UBERON:0006238!3.68e-09!69;UBERON:0000956!9.09e-09!25;UBERON:0000203!9.09e-09!25;UBERON:0002619!2.95e-08!22;UBERON:0001950!4.48e-08!20;UBERON:0001049!1.30e-07!57;UBERON:0005068!1.30e-07!57;UBERON:0006241!1.30e-07!57;UBERON:0007135!1.30e-07!57;UBERON:0003080!2.37e-07!42;UBERON:0002616!2.55e-07!59;UBERON:0002780!4.71e-07!41;UBERON:0001890!4.71e-07!41;UBERON:0006240!4.71e-07!41;UBERON:0003075!4.94e-07!86;UBERON:0007284!4.94e-07!86;UBERON:0001869!7.70e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.67e-10;20!UBERON:0002619;1.93e-09;22!UBERON:0000956;3.72e-08;25!UBERON:0000203;3.72e-08;25!UBERON:0003296;8.86e-08;4!UBERON:0010133;8.86e-08;4!UBERON:0000007;1.56e-07;2!UBERON:0001869;3.58e-07;32!UBERON:0002360;4.36e-07;2!UBERON:0000094;4.36e-07;2!UBERON:0010743;4.36e-07;2!UBERON:0002780;5.17e-07;41!UBERON:0001890;5.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.97e-11,81;UBERON:0001950,2.69e-10,20;UBERON:0002780,1.52e-09,41;UBERON:0001890,1.52e-09,41;UBERON:0003080,1.52e-09,41;UBERON:0006240,1.52e-09,41;UBERON:0001016,1.84e-09,89;UBERON:0000073,2.97e-09,53;UBERON:0002616,2.97e-09,53;UBERON:0002619,2.97e-09,22;UBERON:0003056,6.14e-09,61;UBERON:0001049,1.37e-08,56;UBERON:0005068,1.37e-08,56;UBERON:0006241,1.37e-08,56;UBERON:0007135,1.37e-08,56;UBERON:0000955,1.47e-08,68;UBERON:0006238,1.47e-08,68;UBERON:0000956,5.38e-08,25;UBERON:0000203,5.38e-08,25;UBERON:0003296,7.30e-08,4;UBERON:0010133,7.30e-08,4;UBERON:0003075,1.33e-07,82;UBERON:0007284,1.33e-07,82;UBERON:0000007,1.95e-07,2;UBERON:0001869,2.30e-07,32;UBERON:0002346,4.52e-07,86;UBERON:0001893,7.75e-07,34 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0,0.85870796139317,0.273748850145768,0.627713197974014,0.305653622991805,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.232401601740905,0.710846162437108,0,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,1.93645405075148,2.70852973188684,0,0.272906150057846,0.898893937780338,0.612167784741805,0.962787081228281,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,1.70215567407342,0,0,0,0.868755378820466,0.605399502633369,1.10483290796269,0.949387162322653,0,0,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.511450247374121,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.661743720148475,1.77383517970051,0.43917392846563,0.458426764241994,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0.715471872916026,1.71598473234038,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,3.87780264148325,0,1.49091585508596,0.506522046658319,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0.538168907066586,0,0.211931901159562,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.795178609928912,0.348581828608555,0.725627385107593,1.51392510525377,1.09493207722749,0,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,1.10293972732394,1.30727666455444,0.237270619111097,0.134831308160164,0.588664395376038,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.658501712451753,0,0.301586917234893,0.462942225792648,0,0,0,0.115930404975077,1.52631302506568,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0.425325291727159,0.268675568108545,0.871901815541886,0.383382679165211,2.95597942737566,0.176096868026452,0.207328115540772,0.144119953416961,0.37872730027914,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0.857479297891735,0.112131084345361,0.87192013766656,0.1466765716419,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0.128343036279748,0,0,2.31986643833309,0.335032530668698,1.91381625495949,1.49801404789436,2.99161459204025,2.90090859405225,0.24538298343828,1.00034104211935,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0.767309866440312,0.280660094433074,0.768834895534206,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.574890092096664,1.03850885836724,0.464841513839837,0.362578348774867,0.601519410909855,0.184161977871793,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0.0915694648183434,0.495056999523528,0,0,0,0.386682873168488,0,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0.267096106940212,0.330569830721956,0.768760269460425,1.27612712494584,0.50578890427775,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.744316738719335,0.316379424718726,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0.288666338176536,0,0,0.188287601553558,0.86101074534246,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0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| |||
|short_description=p7@HIVEP1 | |||
}} |
Revision as of 17:39, 13 September 2013
Short description: | p7@HIVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HIVEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000379388_5end |
EntrezGene: | HIVEP1 |
HGNC: | 4920 |
UniProt: | P15822 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.62e-11 | 3 |
blood cell | 1.62e-10 | 11 |
granulocyte | 2.32e-10 | 8 |
eosinophil | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.97e-11 | 81 |
neocortex | 2.69e-10 | 20 |
regional part of forebrain | 1.52e-09 | 41 |
forebrain | 1.52e-09 | 41 |
anterior neural tube | 1.52e-09 | 41 |
future forebrain | 1.52e-09 | 41 |
nervous system | 1.84e-09 | 89 |
regional part of nervous system | 2.97e-09 | 53 |
regional part of brain | 2.97e-09 | 53 |
regional part of cerebral cortex | 2.97e-09 | 22 |
pre-chordal neural plate | 6.14e-09 | 61 |
neural tube | 1.37e-08 | 56 |
neural rod | 1.37e-08 | 56 |
future spinal cord | 1.37e-08 | 56 |
neural keel | 1.37e-08 | 56 |
brain | 1.47e-08 | 68 |
future brain | 1.47e-08 | 68 |
cerebral cortex | 5.38e-08 | 25 |
pallium | 5.38e-08 | 25 |
gland of diencephalon | 7.30e-08 | 4 |
neuroendocrine gland | 7.30e-08 | 4 |
neural plate | 1.33e-07 | 82 |
presumptive neural plate | 1.33e-07 | 82 |
pituitary gland | 1.95e-07 | 2 |
cerebral hemisphere | 2.30e-07 | 32 |
neurectoderm | 4.52e-07 | 86 |
telencephalon | 7.75e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.