FFCP PHASE1:Hg19::chr6:72922590..72922605,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22999|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17282|TSSclassifier=S|UniProt=E9PHF5|association_with_transcript=0bp_to_ENST00000523963_5end|coexpression_cluster_id=C11|description=CAGE_peak_5_at_RIMS1_5end|id=chr6:72922590..72922605,+|ontology_enrichment_celltype=CL:0002150!1.39e-19!3;CL:0000861!1.39e-19!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004733!6.29e-58!12;UBERON:0002028!6.29e-58!12;UBERON:0007277!6.29e-58!12;UBERON:0004732!1.86e-53!13;UBERON:0003076!2.68e-46!15;UBERON:0003057!2.68e-46!15;UBERON:0002680!6.12e-40!9;UBERON:0001895!6.12e-40!9;UBERON:0010092!6.12e-40!9;UBERON:0002298!8.44e-29!8;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001017!3.68e-23!82;UBERON:0000955!4.38e-23!69;UBERON:0006238!4.38e-23!69;UBERON:0002616!1.09e-22!59;UBERON:0002037!1.97e-22!6;UBERON:0006215!1.97e-22!6;UBERON:0005743!4.67e-22!86;UBERON:0001896!4.88e-20!3;UBERON:0005290!4.88e-20!3;UBERON:0010096!4.88e-20!3;UBERON:0000988!5.37e-20!3;UBERON:0000073!6.66e-20!94;UBERON:0001016!6.66e-20!94;UBERON:0003075!1.12e-18!86;UBERON:0007284!1.12e-18!86;UBERON:0002346!8.32e-18!90;UBERON:0007023!1.33e-16!115;UBERON:0001882!3.17e-15!1;UBERON:0005403!3.17e-15!1;UBERON:0000033!1.25e-12!123;UBERON:0000153!5.36e-12!129;UBERON:0007811!5.36e-12!129;UBERON:0004121!1.12e-10!169;UBERON:0000924!2.10e-10!173;UBERON:0006601!2.10e-10!173;UBERON:0002360!1.61e-08!2;UBERON:0000094!1.61e-08!2;UBERON:0007645!1.61e-08!2;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2;UBERON:0001897!2.31e-08!2;UBERON:0001870!3.08e-08!2;UBERON:0002308!3.45e-07!9;UBERON:0000125!3.45e-07!9;UBERON:0000063!9.38e-07!97|ontology_enrichment_uberon_v019=UBERON:0004733;1.36e-68;12!UBERON:0002028;1.36e-68;12!UBERON:0004732;2.20e-63;13!UBERON:0002680;8.03e-59;9!UBERON:0001895;8.03e-59;9!UBERON:0002037;3.84e-50;6!UBERON:0002298;8.01e-23;6!UBERON:0002360;1.17e-17;2!UBERON:0000094;1.17e-17;2!UBERON:0010743;1.17e-17;2!UBERON:0001896;2.59e-12;3!UBERON:0005290;2.59e-12;3!UBERON:0000988;3.06e-12;3!UBERON:0000073;1.51e-11;53!UBERON:0002616;1.51e-11;53!UBERON:0001016;7.51e-10;83!UBERON:0001017;1.16e-08;75!UBERON:0000955;1.00e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.45e-68,12;UBERON:0002028,1.45e-68,12;UBERON:0007277,1.45e-68,12;UBERON:0004732,2.34e-63,13;UBERON:0002680,8.65e-59,9;UBERON:0001895,8.65e-59,9;UBERON:0010092,8.65e-59,9;UBERON:0003076,5.07e-55,15;UBERON:0003057,5.07e-55,15;UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002298,8.47e-23,6;UBERON:0002360,1.07e-17,2;UBERON:0000094,1.07e-17,2;UBERON:0010743,1.07e-17,2;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0001017,9.81e-15,81;UBERON:0001016,2.44e-13,89;UBERON:0001896,2.59e-12,3;UBERON:0005290,2.59e-12,3;UBERON:0010096,2.59e-12,3;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0000988,3.24e-12,3;UBERON:0007023,7.60e-11,114;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0010371,2.57e-08,104;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,93.0748591534208,88.6845664648421,49.9475476031495,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4953341254903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@RIMS1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |||
|TSSclassifier=S | |||
|UniProt=E9PHF5 | |||
|association_with_transcript=0bp_to_ENST00000523963_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_RIMS1_5end | |||
|id=chr6:72922590..72922605,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.39e-19!3;CL:0000861!1.39e-19!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!6.29e-58!12;UBERON:0002028!6.29e-58!12;UBERON:0007277!6.29e-58!12;UBERON:0004732!1.86e-53!13;UBERON:0003076!2.68e-46!15;UBERON:0003057!2.68e-46!15;UBERON:0002680!6.12e-40!9;UBERON:0001895!6.12e-40!9;UBERON:0010092!6.12e-40!9;UBERON:0002298!8.44e-29!8;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001017!3.68e-23!82;UBERON:0000955!4.38e-23!69;UBERON:0006238!4.38e-23!69;UBERON:0002616!1.09e-22!59;UBERON:0002037!1.97e-22!6;UBERON:0006215!1.97e-22!6;UBERON:0005743!4.67e-22!86;UBERON:0001896!4.88e-20!3;UBERON:0005290!4.88e-20!3;UBERON:0010096!4.88e-20!3;UBERON:0000988!5.37e-20!3;UBERON:0000073!6.66e-20!94;UBERON:0001016!6.66e-20!94;UBERON:0003075!1.12e-18!86;UBERON:0007284!1.12e-18!86;UBERON:0002346!8.32e-18!90;UBERON:0007023!1.33e-16!115;UBERON:0001882!3.17e-15!1;UBERON:0005403!3.17e-15!1;UBERON:0000033!1.25e-12!123;UBERON:0000153!5.36e-12!129;UBERON:0007811!5.36e-12!129;UBERON:0004121!1.12e-10!169;UBERON:0000924!2.10e-10!173;UBERON:0006601!2.10e-10!173;UBERON:0002360!1.61e-08!2;UBERON:0000094!1.61e-08!2;UBERON:0007645!1.61e-08!2;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2;UBERON:0001897!2.31e-08!2;UBERON:0001870!3.08e-08!2;UBERON:0002308!3.45e-07!9;UBERON:0000125!3.45e-07!9;UBERON:0000063!9.38e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.36e-68;12!UBERON:0002028;1.36e-68;12!UBERON:0004732;2.20e-63;13!UBERON:0002680;8.03e-59;9!UBERON:0001895;8.03e-59;9!UBERON:0002037;3.84e-50;6!UBERON:0002298;8.01e-23;6!UBERON:0002360;1.17e-17;2!UBERON:0000094;1.17e-17;2!UBERON:0010743;1.17e-17;2!UBERON:0001896;2.59e-12;3!UBERON:0005290;2.59e-12;3!UBERON:0000988;3.06e-12;3!UBERON:0000073;1.51e-11;53!UBERON:0002616;1.51e-11;53!UBERON:0001016;7.51e-10;83!UBERON:0001017;1.16e-08;75!UBERON:0000955;1.00e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.45e-68,12;UBERON:0002028,1.45e-68,12;UBERON:0007277,1.45e-68,12;UBERON:0004732,2.34e-63,13;UBERON:0002680,8.65e-59,9;UBERON:0001895,8.65e-59,9;UBERON:0010092,8.65e-59,9;UBERON:0003076,5.07e-55,15;UBERON:0003057,5.07e-55,15;UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002298,8.47e-23,6;UBERON:0002360,1.07e-17,2;UBERON:0000094,1.07e-17,2;UBERON:0010743,1.07e-17,2;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0001017,9.81e-15,81;UBERON:0001016,2.44e-13,89;UBERON:0001896,2.59e-12,3;UBERON:0005290,2.59e-12,3;UBERON:0010096,2.59e-12,3;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0000988,3.24e-12,3;UBERON:0007023,7.60e-11,114;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0010371,2.57e-08,104;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,93.0748591534208,88.6845664648421,49.9475476031495,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4953341254903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@RIMS1 | |||
}} |
Revision as of 21:44, 13 September 2013
Short description: | p5@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RIMS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000523963_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E9PHF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.