FFCP PHASE1:Hg19::chr8:87755878..87755933,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54714|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2153|TSSclassifier=S|UniProt=Q9NQW8|association_with_transcript=0bp_to_ENST00000320005,NM_019098,uc003ydx.2_5end|coexpression_cluster_id=C24|description=CAGE_peak_2_at_CNGB3_5end|id=chr8:87755878..87755933,-|ontology_enrichment_celltype=CL:0002586!3.01e-12!3;CL:0000149!2.08e-09!4|ontology_enrichment_celltype_v019=CL:0002586;2.47e-07;3|ontology_enrichment_celltype_v019_2=CL:0002586,2.47e-07,3|ontology_enrichment_development_v019=UBERON:0006601;9.18e-08;82!UBERON:0003056;2.05e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!3.51e-27!5;UBERON:0005388!3.51e-27!5;UBERON:0001802!3.51e-27!5;UBERON:0002298!7.60e-26!8;UBERON:0001896!1.13e-25!3;UBERON:0005290!1.13e-25!3;UBERON:0010096!1.13e-25!3;UBERON:0005743!1.71e-24!86;UBERON:0000073!5.99e-22!94;UBERON:0001016!5.99e-22!94;UBERON:0003075!9.29e-22!86;UBERON:0007284!9.29e-22!86;UBERON:0002346!1.11e-20!90;UBERON:0003296!6.89e-20!4;UBERON:0010133!6.89e-20!4;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0007023!6.09e-18!115;UBERON:0001017!5.57e-17!82;UBERON:0001049!1.57e-15!57;UBERON:0005068!1.57e-15!57;UBERON:0006241!1.57e-15!57;UBERON:0007135!1.57e-15!57;UBERON:0000955!8.23e-15!69;UBERON:0006238!8.23e-15!69;UBERON:0003076!7.62e-14!15;UBERON:0003057!7.62e-14!15;UBERON:0000033!2.22e-12!123;UBERON:0002616!2.75e-12!59;UBERON:0001781!3.01e-12!3;UBERON:0001782!3.01e-12!3;UBERON:0005424!3.01e-12!3;UBERON:0006331!5.58e-12!3;UBERON:0003056!7.13e-12!61;UBERON:0000153!1.08e-11!129;UBERON:0007811!1.08e-11!129;UBERON:0001894!1.31e-11!7;UBERON:0006222!1.31e-11!7;UBERON:0004733!2.15e-11!12;UBERON:0002028!2.15e-11!12;UBERON:0007277!2.15e-11!12;UBERON:0004121!4.47e-11!169;UBERON:0000924!9.34e-11!173;UBERON:0006601!9.34e-11!173;UBERON:0004732!1.57e-10!13;UBERON:0000970!1.81e-10!20;UBERON:0002104!5.81e-10!21;UBERON:0006834!1.36e-09!1;UBERON:0002038!1.91e-09!1;UBERON:0009661!1.91e-09!1;UBERON:0002336!2.67e-09!1;UBERON:0001018!2.67e-09!1;UBERON:0002473!2.67e-09!1;UBERON:0005340!2.67e-09!1;UBERON:0002316!2.67e-09!1;UBERON:0003544!2.67e-09!1;UBERON:0001020!2.67e-09!1;UBERON:0005970!2.67e-09!1;UBERON:0002437!2.67e-09!1;UBERON:0000020!4.43e-09!23;UBERON:0001032!1.08e-08!24;UBERON:0004456!1.08e-08!24;UBERON:0000019!2.72e-07!19;UBERON:0000047!2.72e-07!19;UBERON:0004088!2.72e-07!19;UBERON:0003072!2.72e-07!19;UBERON:0003071!2.72e-07!19;UBERON:0004128!2.72e-07!19|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0002298;3.18e-27;6!UBERON:0001896;1.29e-24;3!UBERON:0005290;1.29e-24;3!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000966;1.62e-15;5!UBERON:0005388;1.62e-15;5!UBERON:0001802;1.62e-15;5!UBERON:0004733;5.53e-14;12!UBERON:0002028;5.53e-14;12!UBERON:0004732;5.84e-13;13!UBERON:0001894;1.68e-11;7!UBERON:0002360;2.07e-10;2!UBERON:0000094;2.07e-10;2!UBERON:0010743;2.07e-10;2!UBERON:0002148;3.13e-10;2!UBERON:0006331;3.13e-10;2!UBERON:0009662;3.13e-10;2!UBERON:0000970;8.08e-09;20!UBERON:0001017;1.95e-08;75!UBERON:0002104;2.00e-08;21!UBERON:0000020;9.66e-08;23!UBERON:0001032;1.93e-07;24!UBERON:0004456;1.93e-07;24!UBERON:0001781;2.47e-07;3!UBERON:0001782;2.47e-07;3!UBERON:0000988;3.06e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0002298,3.64e-27,6;UBERON:0001896,1.29e-24,3;UBERON:0005290,1.29e-24,3;UBERON:0010096,1.29e-24,3;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0004733,5.91e-14,12;UBERON:0002028,5.91e-14,12;UBERON:0007277,5.91e-14,12;UBERON:0000966,4.26e-13,6;UBERON:0005388,4.26e-13,6;UBERON:0001802,4.26e-13,6;UBERON:0004732,6.21e-13,13;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0003076,2.70e-11,15;UBERON:0003057,2.70e-11,15;UBERON:0002360,2.07e-10,2;UBERON:0000094,2.07e-10,2;UBERON:0010743,2.07e-10,2;UBERON:0003075,2.43e-10,82;UBERON:0007284,2.43e-10,82;UBERON:0001017,2.54e-10,81;UBERON:0002148,3.58e-10,2;UBERON:0006331,3.58e-10,2;UBERON:0009662,3.58e-10,2;UBERON:0002346,7.53e-10,86;UBERON:0001016,2.82e-09,89;UBERON:0000955,4.00e-09,68;UBERON:0006238,4.00e-09,68;UBERON:0000970,2.00e-08,21;UBERON:0002104,2.00e-08,21;UBERON:0000073,2.02e-08,53;UBERON:0002616,2.02e-08,53;UBERON:0010371,4.28e-08,104;UBERON:0001049,5.59e-08,56;UBERON:0005068,5.59e-08,56;UBERON:0006241,5.59e-08,56;UBERON:0007135,5.59e-08,56;UBERON:0004121,8.39e-08,171;UBERON:0000924,8.39e-08,171;UBERON:0006601,8.39e-08,171;UBERON:0000020,1.93e-07,24;UBERON:0001032,1.93e-07,24;UBERON:0004456,1.93e-07,24;UBERON:0007023,1.99e-07,114;UBERON:0001782,2.47e-07,3;UBERON:0005424,2.47e-07,3;UBERON:0000988,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,10.737487023922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4080406520066,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4735733383471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,1.0342636508924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.10929051536852,0.248385611765534,8.71596400098254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1505.32215881799,1563.04674087309,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,59.3255316666248,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0|short_description=p2@CNGB3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |||
|TSSclassifier=S | |||
|UniProt=Q9NQW8 | |||
|association_with_transcript=0bp_to_ENST00000320005,NM_019098,uc003ydx.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_CNGB3_5end | |||
|id=chr8:87755878..87755933,- | |||
|ontology_enrichment_celltype=CL:0002586!3.01e-12!3;CL:0000149!2.08e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.18e-08;82!UBERON:0003056;2.05e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!3.51e-27!5;UBERON:0005388!3.51e-27!5;UBERON:0001802!3.51e-27!5;UBERON:0002298!7.60e-26!8;UBERON:0001896!1.13e-25!3;UBERON:0005290!1.13e-25!3;UBERON:0010096!1.13e-25!3;UBERON:0005743!1.71e-24!86;UBERON:0000073!5.99e-22!94;UBERON:0001016!5.99e-22!94;UBERON:0003075!9.29e-22!86;UBERON:0007284!9.29e-22!86;UBERON:0002346!1.11e-20!90;UBERON:0003296!6.89e-20!4;UBERON:0010133!6.89e-20!4;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0007023!6.09e-18!115;UBERON:0001017!5.57e-17!82;UBERON:0001049!1.57e-15!57;UBERON:0005068!1.57e-15!57;UBERON:0006241!1.57e-15!57;UBERON:0007135!1.57e-15!57;UBERON:0000955!8.23e-15!69;UBERON:0006238!8.23e-15!69;UBERON:0003076!7.62e-14!15;UBERON:0003057!7.62e-14!15;UBERON:0000033!2.22e-12!123;UBERON:0002616!2.75e-12!59;UBERON:0001781!3.01e-12!3;UBERON:0001782!3.01e-12!3;UBERON:0005424!3.01e-12!3;UBERON:0006331!5.58e-12!3;UBERON:0003056!7.13e-12!61;UBERON:0000153!1.08e-11!129;UBERON:0007811!1.08e-11!129;UBERON:0001894!1.31e-11!7;UBERON:0006222!1.31e-11!7;UBERON:0004733!2.15e-11!12;UBERON:0002028!2.15e-11!12;UBERON:0007277!2.15e-11!12;UBERON:0004121!4.47e-11!169;UBERON:0000924!9.34e-11!173;UBERON:0006601!9.34e-11!173;UBERON:0004732!1.57e-10!13;UBERON:0000970!1.81e-10!20;UBERON:0002104!5.81e-10!21;UBERON:0006834!1.36e-09!1;UBERON:0002038!1.91e-09!1;UBERON:0009661!1.91e-09!1;UBERON:0002336!2.67e-09!1;UBERON:0001018!2.67e-09!1;UBERON:0002473!2.67e-09!1;UBERON:0005340!2.67e-09!1;UBERON:0002316!2.67e-09!1;UBERON:0003544!2.67e-09!1;UBERON:0001020!2.67e-09!1;UBERON:0005970!2.67e-09!1;UBERON:0002437!2.67e-09!1;UBERON:0000020!4.43e-09!23;UBERON:0001032!1.08e-08!24;UBERON:0004456!1.08e-08!24;UBERON:0000019!2.72e-07!19;UBERON:0000047!2.72e-07!19;UBERON:0004088!2.72e-07!19;UBERON:0003072!2.72e-07!19;UBERON:0003071!2.72e-07!19;UBERON:0004128!2.72e-07!19 | |||
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|short_description=p2@CNGB3 | |||
}} |
Revision as of 06:16, 14 September 2013
Short description: | p2@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CNGB3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000320005, NM_019098, uc003ydx.2_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | Q9NQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.47e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.