FFCP PHASE1:Hg19::chrX:118827351..118827365,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23157|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15848|TSSclassifier=S|UniProt=Q14141,B1AMS2,F8W8Q8,Q541S4,Q548C9|association_with_transcript=-18bp_to_ENST00000343984,ENST00000354228,ENST00000354416,ENST00000360156,ENST00000394610,ENST00000460411,ENST00000489216,ENST00000520510,NM_015129,NM_145799,NM_145800,NM_145802,uc004ers.2,uc004ert.2,uc004eru.2,uc004erv.2,uc010nqk.2_5end|description=CAGE_peak_4_at_SEPT6_5end|id=chrX:118827351..118827365,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.93e-08!94;UBERON:0001016!2.93e-08!94;UBERON:0007023!1.62e-07!115;UBERON:0001017!7.45e-07!82;UBERON:0002619!8.61e-07!22;UBERON:0005743!9.55e-07!86|ontology_enrichment_uberon_v019=UBERON:0002619;1.65e-09;22!UBERON:0001950;9.06e-09;20!UBERON:0000956;3.96e-08;25!UBERON:0000203;3.96e-08;25!UBERON:0001869;1.09e-07;32!UBERON:0002106;3.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.78e-10,22;UBERON:0001950,4.49e-09,20;UBERON:0001016,9.65e-09,89;UBERON:0002780,1.27e-08,41;UBERON:0001890,1.27e-08,41;UBERON:0003080,1.27e-08,41;UBERON:0006240,1.27e-08,41;UBERON:0001869,1.29e-08,32;UBERON:0000956,1.84e-08,25;UBERON:0000203,1.84e-08,25;UBERON:0001017,2.53e-08,81;UBERON:0000073,5.52e-08,53;UBERON:0002616,5.52e-08,53;UBERON:0001893,5.96e-08,34;UBERON:0002791,2.23e-07,32;UBERON:0002106,2.27e-07,3;UBERON:0004854,2.27e-07,3;UBERON:0009034,2.27e-07,3;UBERON:0002095,2.27e-07,3;UBERON:0004782,2.27e-07,3;UBERON:0003281,2.27e-07,3;UBERON:0009664,2.27e-07,3;UBERON:0002296,2.27e-07,3;UBERON:0005602,2.27e-07,3;UBERON:0001179,2.27e-07,3;UBERON:0006293,2.27e-07,3;UBERON:0001049,2.38e-07,56;UBERON:0005068,2.38e-07,56;UBERON:0006241,2.38e-07,56;UBERON:0007135,2.38e-07,56;UBERON:0000955,5.95e-07,68;UBERON:0006238,5.95e-07,68;UBERON:0003528,8.39e-07,34;UBERON:0002020,8.39e-07,34|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0.263766978228454,0.618831764800233,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.547497700291537,0.125542639594803,0.764134057479513,0.821005894499457,0.629686250509434,0.393364276848904,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0.77272670290256,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0,0.838634582033504,0.44931452458598,0.600707571366025,0,0,0.39783335439818,0,3.51992488922645,0,0,0.426730222566507,0.800791974072025,2.29900975981793,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,1.05353633910031,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,1.94826728407911,1.22551502573691,0,0.443067789167242,0,0.512365278902701,0.520237390239513,1.15106533222573,1.65810010671509,1.15921234294021,0.296573126324121,0,0,0.793165398882963,0.383220493601921,0.68725489096526,0.253019692019503,1.27426165729639,0.651083453856419,0.950452044448374,0.451725357233318,0.895906278080929,0,0.947109008176067,0.821127996921047,0.604820229674197,0,0.289648807765598,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.472674085820339,0.443458794925128,0.263504357079378,0.458426764241994,0,0,0,0.174129737299267,0,1.43094374583205,1.71598473234038,0.371457501329565,0,0,1.04142150482278,1.13061588384802,0.838998872419812,0,0,0.775250277507987,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0.22452937262617,0.225222960966644,0,0,0.732806975721629,1.31780417436063,0,0,0,0,0.529636723252875,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0.311211035399766,0,0,0.605429710579726,0,0.70296429550139,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0.919463387397059,0.150238058906597,0.567160915800105,0.358779271377724,1.06778694409284,0.635795703478686,0.300091096084402,0.515262646192195,0.257640540045629,0.37223371266318,0.168776332241266,1.07180705677318,0.252433774244115,1.01254888506529,0.484938170456436,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0.310983165046111,0.504641701751257,1.09493207722749,0,1.28648187638577,0,0.928735856063958,0,0.118306800039844,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.392442930250692,0.76949431389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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15848 | |||
|TSSclassifier=S | |||
|UniProt=Q14141,B1AMS2,F8W8Q8,Q541S4,Q548C9 | |||
|association_with_transcript=-18bp_to_ENST00000343984,ENST00000354228,ENST00000354416,ENST00000360156,ENST00000394610,ENST00000460411,ENST00000489216,ENST00000520510,NM_015129,NM_145799,NM_145800,NM_145802,uc004ers.2,uc004ert.2,uc004eru.2,uc004erv.2,uc010nqk.2_5end | |||
|description=CAGE_peak_4_at_SEPT6_5end | |||
|id=chrX:118827351..118827365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.93e-08!94;UBERON:0001016!2.93e-08!94;UBERON:0007023!1.62e-07!115;UBERON:0001017!7.45e-07!82;UBERON:0002619!8.61e-07!22;UBERON:0005743!9.55e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.65e-09;22!UBERON:0001950;9.06e-09;20!UBERON:0000956;3.96e-08;25!UBERON:0000203;3.96e-08;25!UBERON:0001869;1.09e-07;32!UBERON:0002106;3.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.78e-10,22;UBERON:0001950,4.49e-09,20;UBERON:0001016,9.65e-09,89;UBERON:0002780,1.27e-08,41;UBERON:0001890,1.27e-08,41;UBERON:0003080,1.27e-08,41;UBERON:0006240,1.27e-08,41;UBERON:0001869,1.29e-08,32;UBERON:0000956,1.84e-08,25;UBERON:0000203,1.84e-08,25;UBERON:0001017,2.53e-08,81;UBERON:0000073,5.52e-08,53;UBERON:0002616,5.52e-08,53;UBERON:0001893,5.96e-08,34;UBERON:0002791,2.23e-07,32;UBERON:0002106,2.27e-07,3;UBERON:0004854,2.27e-07,3;UBERON:0009034,2.27e-07,3;UBERON:0002095,2.27e-07,3;UBERON:0004782,2.27e-07,3;UBERON:0003281,2.27e-07,3;UBERON:0009664,2.27e-07,3;UBERON:0002296,2.27e-07,3;UBERON:0005602,2.27e-07,3;UBERON:0001179,2.27e-07,3;UBERON:0006293,2.27e-07,3;UBERON:0001049,2.38e-07,56;UBERON:0005068,2.38e-07,56;UBERON:0006241,2.38e-07,56;UBERON:0007135,2.38e-07,56;UBERON:0000955,5.95e-07,68;UBERON:0006238,5.95e-07,68;UBERON:0003528,8.39e-07,34;UBERON:0002020,8.39e-07,34 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0.263766978228454,0.618831764800233,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.547497700291537,0.125542639594803,0.764134057479513,0.821005894499457,0.629686250509434,0.393364276848904,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0.77272670290256,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0,0.838634582033504,0.44931452458598,0.600707571366025,0,0,0.39783335439818,0,3.51992488922645,0,0,0.426730222566507,0.800791974072025,2.29900975981793,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,1.05353633910031,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,1.94826728407911,1.22551502573691,0,0.443067789167242,0,0.512365278902701,0.520237390239513,1.15106533222573,1.65810010671509,1.15921234294021,0.296573126324121,0,0,0.793165398882963,0.383220493601921,0.68725489096526,0.253019692019503,1.27426165729639,0.651083453856419,0.950452044448374,0.451725357233318,0.895906278080929,0,0.947109008176067,0.821127996921047,0.604820229674197,0,0.289648807765598,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.472674085820339,0.443458794925128,0.263504357079378,0.458426764241994,0,0,0,0.174129737299267,0,1.43094374583205,1.71598473234038,0.371457501329565,0,0,1.04142150482278,1.13061588384802,0.838998872419812,0,0,0.775250277507987,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0.22452937262617,0.225222960966644,0,0,0.732806975721629,1.31780417436063,0,0,0,0,0.529636723252875,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0.311211035399766,0,0,0.605429710579726,0,0.70296429550139,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0.919463387397059,0.150238058906597,0.567160915800105,0.358779271377724,1.06778694409284,0.635795703478686,0.300091096084402,0.515262646192195,0.257640540045629,0.37223371266318,0.168776332241266,1.07180705677318,0.252433774244115,1.01254888506529,0.484938170456436,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0.310983165046111,0.504641701751257,1.09493207722749,0,1.28648187638577,0,0.928735856063958,0,0.118306800039844,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0,0,0,0.277765335475589,0,0,0,1.04337364477569,0.352226082707465,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0,0,0.383382679165211,0.492663237895943,0.264145302039678,0.621984346622316,0.144119953416961,0.6312121671319,0.317489471460845,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0.672786506072164,0,0.07333828582095,0.775630294546667,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,1.00451418286425,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.716243852959582,1.2329365839288,0,0.215627574859517,0,0.254094624222463,1.30139853857622,0,1.00509759200609,1.27587750330633,0,0,0,0.858840442033979,0,0.813795071099207,1.03985430765404,0.713715955188647,0.788512075169673,0.937131319941706,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.521301686808497,0.195801157462741,0,1.03384013061444,0.647142602455851,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.492762936082855,1.03850885836724,0,0.241718899183244,0.200506470303285,0,0.229628896329213,0.364182336013434,0.655622074797121,0,0.462092022626489,0,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0.769350375349168,0,0,0.515205058238611,0.457847324091717,0.41254749960294,0,0.650060246036521,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0,0.429680979473094,0,0.170453254832202,0.623224249527161,0,0,0,0,0.929691098594572,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0.409499734223957,0.565621727814851,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0.655894752046633,0.202910376962704,1.239293992399,0.845086807596724,0.573645408816206,0.4912452050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| |||
|short_description=p4@SEPT6 | |||
}} |
Revision as of 10:33, 14 September 2013
Short description: | p4@SEPT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SEPT6_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000343984, ENST00000354228, ENST00000354416, ENST00000360156, ENST00000394610, ENST00000460411, ENST00000489216, ENST00000520510, NM_015129, NM_145799, NM_145800, NM_145802, uc004ers.2, uc004ert.2, uc004eru.2, uc004erv.2, uc010nqk.2_5end |
EntrezGene: | SEPT6 |
HGNC: | 15848 |
UniProt: | Q14141B1AMS2F8W8Q8Q541S4Q548C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 6.78e-10 | 22 |
neocortex | 4.49e-09 | 20 |
nervous system | 9.65e-09 | 89 |
regional part of forebrain | 1.27e-08 | 41 |
forebrain | 1.27e-08 | 41 |
anterior neural tube | 1.27e-08 | 41 |
future forebrain | 1.27e-08 | 41 |
cerebral hemisphere | 1.29e-08 | 32 |
cerebral cortex | 1.84e-08 | 25 |
pallium | 1.84e-08 | 25 |
central nervous system | 2.53e-08 | 81 |
regional part of nervous system | 5.52e-08 | 53 |
regional part of brain | 5.52e-08 | 53 |
telencephalon | 5.96e-08 | 34 |
regional part of telencephalon | 2.23e-07 | 32 |
spleen | 2.27e-07 | 3 |
gastrointestinal system mesentery | 2.27e-07 | 3 |
stomach region | 2.27e-07 | 3 |
mesentery | 2.27e-07 | 3 |
gastrointestinal system serosa | 2.27e-07 | 3 |
mesentery of stomach | 2.27e-07 | 3 |
gut mesentery | 2.27e-07 | 3 |
dorsal mesentery | 2.27e-07 | 3 |
dorsal mesogastrium | 2.27e-07 | 3 |
peritoneal cavity | 2.27e-07 | 3 |
spleen primordium | 2.27e-07 | 3 |
neural tube | 2.38e-07 | 56 |
neural rod | 2.38e-07 | 56 |
future spinal cord | 2.38e-07 | 56 |
neural keel | 2.38e-07 | 56 |
brain | 5.95e-07 | 68 |
future brain | 5.95e-07 | 68 |
brain grey matter | 8.39e-07 | 34 |
gray matter | 8.39e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.