FFCP PHASE1:Hg19::chr10:105615754..105615755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |||
|TSSclassifier=weak | |||
|UniProt=Q5TCZ1 | |||
|association_with_transcript=-453bp_to_ENST00000369774_5end | |||
|description=CAGE_peak_17_at_SH3PXD2A_5end | |||
|id=chr10:105615754..105615755,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.21e-13;2!CL:0000594;1.01e-09;3!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.55e-13,2;CL:0000008,1.55e-13,2;CL:0000594,1.01e-09,3;CL:0000306,1.69e-07,4;CL:0002222,1.69e-07,4;CL:0002224,1.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000008;1.21e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.21e-13;2!UBERON:0001777;1.21e-13;2!UBERON:0001801;5.18e-08;14!UBERON:0002119;1.44e-07;4!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0003891;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000964;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4!UBERON:0010409;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.55e-13,2;UBERON:0001777,1.55e-13,2;UBERON:0001801,5.36e-08,14;UBERON:0002119,1.40e-07,4;UBERON:0010077,1.69e-07,4;UBERON:0005389,1.69e-07,4;UBERON:0000484,1.69e-07,4;UBERON:0002546,1.69e-07,4;UBERON:0000965,1.69e-07,4;UBERON:0001803,1.69e-07,4;UBERON:0003073,1.69e-07,4;UBERON:0005426,1.69e-07,4;UBERON:0003891,2.04e-07,4;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.850417199860174,0,0.336985893439485,0,0.48217676009124,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0,0.334372990781356,0,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0.328875809207352,0.276350017785848,0,0.296573126324121,0,1.04535523804977,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,1.44331342025273,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.35142424497814,0.300946099727719,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.276242966807689,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,3.48040065394148,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.392996164052485,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,1.29694662238543,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0.290967049465258,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.754703705257725,1.77962244319307,0.457680136793847,0.151230923763239,0,0,0,0,0.155262956876259,2.48823724704513,0.265841714557995,0,0.450772826991655,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0.118332000730565,0.255640214277473,0,0,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,0.615976841137482,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0.202117188958219,0,0,0.202056159043763,0,0.332660356546013,0.162806537221949,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p17@SH3PXD2A | |||
}} |
Revision as of 04:49, 11 January 2014
Short description: | p17@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_SH3PXD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -453bp_to_ENST00000369774_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | Q5TCZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.55e-13 | 2 |
migratory cranial neural crest cell | 1.55e-13 | 2 |
skeletal muscle satellite cell | 1.01e-09 | 3 |
crystallin accumulating cell | 1.69e-07 | 4 |
vertebrate lens cell | 1.69e-07 | 4 |
lens epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.55e-13 | 2 |
substantia propria of cornea | 1.55e-13 | 2 |
anterior segment of eyeball | 5.36e-08 | 14 |
left ovary | 1.40e-07 | 4 |
cuboidal epithelium | 1.69e-07 | 4 |
transparent eye structure | 1.69e-07 | 4 |
simple cuboidal epithelium | 1.69e-07 | 4 |
cranial placode | 1.69e-07 | 4 |
lens of camera-type eye | 1.69e-07 | 4 |
epithelium of lens | 1.69e-07 | 4 |
lens placode | 1.69e-07 | 4 |
lens vesicle | 1.69e-07 | 4 |
stroma | 2.04e-07 | 4 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |