FFCP PHASE1:Hg19::chr11:8739566..8739612,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKE0 | |||
|association_with_transcript=0bp_to_ENST00000533020_5end | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_4_at_ST5_5end | |||
|id=chr11:8739566..8739612,- | |||
|ontology_enrichment_celltype=CL:0000057!4.93e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000128;8.11e-07;7!CL:0000126;8.11e-07;7!CL:0000127;8.11e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.34e-07,7;CL:0000126,5.34e-07,7;CL:0000127,5.34e-07,7;CL:0002453,5.34e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.83e-23!365;UBERON:0000481!1.14e-19!347;UBERON:0000477!1.76e-15!286;UBERON:0000468!2.70e-15!659;UBERON:0007023!9.97e-15!115;UBERON:0000033!3.32e-14!123;UBERON:0003075!4.98e-14!86;UBERON:0007284!4.98e-14!86;UBERON:0000153!6.65e-14!129;UBERON:0007811!6.65e-14!129;UBERON:0000119!7.35e-14!312;UBERON:0004111!7.75e-14!241;UBERON:0000483!1.56e-13!309;UBERON:0000062!1.81e-13!511;UBERON:0002346!8.31e-13!90;UBERON:0005743!1.05e-11!86;UBERON:0000955!1.51e-11!69;UBERON:0006238!1.51e-11!69;UBERON:0000467!1.59e-11!625;UBERON:0000025!1.84e-11!194;UBERON:0000480!2.53e-11!626;UBERON:0000064!3.50e-11!219;UBERON:0001017!8.05e-11!82;UBERON:0001049!9.20e-11!57;UBERON:0005068!9.20e-11!57;UBERON:0006241!9.20e-11!57;UBERON:0007135!9.20e-11!57;UBERON:0004121!3.89e-10!169;UBERON:0000073!6.02e-10!94;UBERON:0001016!6.02e-10!94;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0003056!2.75e-09!61;UBERON:0002616!2.88e-09!59;UBERON:0000922!4.08e-09!612;UBERON:0002050!1.13e-08!605;UBERON:0005423!1.13e-08!605;UBERON:0000923!2.10e-08!604;UBERON:0005291!2.10e-08!604;UBERON:0006598!2.10e-08!604;UBERON:0002532!2.10e-08!604;UBERON:0002417!4.07e-08!61;UBERON:0000916!4.07e-08!61;UBERON:0009854!4.32e-08!23;UBERON:0009856!5.18e-08!26;UBERON:0009497!1.13e-07!25;UBERON:0000015!1.13e-07!25;UBERON:0002423!1.13e-07!25;UBERON:0006235!1.13e-07!25;UBERON:0004161!1.13e-07!25;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0001048!1.58e-07!168;UBERON:0007499!1.65e-07!25;UBERON:0003103!1.72e-07!69;UBERON:0005256!5.90e-07!143;UBERON:0000466!8.55e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.34e-09;25!UBERON:0002107;1.42e-08;19!UBERON:0006925;1.42e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-10,114;UBERON:0009856,6.17e-10,26;UBERON:0009854,1.20e-09,23;UBERON:0003075,1.38e-09,82;UBERON:0007284,1.38e-09,82;UBERON:0009497,1.83e-09,25;UBERON:0000015,1.83e-09,25;UBERON:0002423,1.83e-09,25;UBERON:0006235,1.83e-09,25;UBERON:0004161,1.83e-09,25;UBERON:0007499,3.06e-09,25;UBERON:0001048,5.39e-09,160;UBERON:0008835,6.14e-09,22;UBERON:0003894,6.14e-09,22;UBERON:0010314,7.22e-09,132;UBERON:0002346,1.53e-08,86;UBERON:0002107,1.68e-08,19;UBERON:0006925,1.68e-08,19;UBERON:0008836,1.68e-08,19;UBERON:0002417,8.55e-08,60;UBERON:0000916,8.55e-08,60;UBERON:0011216,2.70e-07,223 | |||
|phase1_expression=2.36181893051724,4.49611100171065,2.39622486963151,2.00146596706261,4.02264984984559,3.48935409640147,2.53299878168311,0.631719873426831,2.87304191019822,1.72013755551056,7.6758128476967,3.49506195408276,2.90143676051299,1.11389717664042,0.331397375727916,0,0.602694528023977,0,0,4.55547914884115,1.83600622119828,7.20945859399602,3.14859585844162,2.18999080116615,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.40648818027883,0,1.00267582127178,1.15877215168659,1.5905718941022,0,2.17430079477356,3.32594096193846,1.58102614247627,1.89919659471683,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0,0.982297011124877,0,0.450445921933289,0,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0,0.633152558322899,0.264818361626438,0.573673241497627,0.709336764396714,2.24271040056923,2.1349799145941,0.98667019366864,3.11211035399766,0.538842688278752,0.653847612453835,2.4217188423189,0,1.87457145467037,0,0.570471821544449,0,0.352303495931295,0.647491777472526,0.421352420106746,0.204154171254893,0.122834317311768,0.516628905878827,1.18800285728205,1.48360157567134,2.73048408581408,0.718618141816238,0.168336113954066,0.375355559615893,0.554128230968366,0.877955241761676,0.612975591598039,1.05166641234618,1.13432183160021,1.4351170855109,1.92201649936711,0.423863802319124,1.20036438433761,1.13357782162283,1.28820270022815,1.8611685633159,1.0126579934476,1.46155507741798,1.26216887122057,2.57739716198438,1.13152239773168,1.06502877754984,0.705264687593482,1.86516651541536,0,0.272746120590835,0,0.243947412259191,0,0.232387885739037,0.621966330092223,0.252320850875628,1.09493207722749,0,1.92972281457866,0,0.928735856063958,0,0.709840800239063,0.168584690078102,0.241011029883482,0.330881918197182,0,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,2.21446636387394,1.40241773803446,4.9388881359768,4.41026134156626,5.07020139287323,3.9313088667105,0.590789906681404,0,1.47586126251736,0.857839051492628,0,0,0,0.555530670951178,0.977424915930974,2.07986957055916,1.44331342025273,5.79652024875384,1.40890433082986,0.721832238805369,0.925971025153221,0.761016608938393,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.897048674762886,0.43596006883328,1.10007428731425,0.517086863031111,7.15312891703765,0.845302752556,1.06375246633948,2.08014873822732,2.31486636835928,1.41849132023278,1.5985330740966,1.42977993658148,7.05408087008876,4.11620168390384,0.65147236858747,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,1.64381058040307,1.25342674267927,0,0,0,0,1.01637849688985,0,0,0.502548796003046,0,0,0,0,2.08575535922538,1.50051156317903,0,2.49565033836969,0.535286966391485,1.41932173530541,1.05427273493442,1.20378439891088,0,0,0.664225598535437,1.10621501125022,1.12948698808508,9.00685324328607,3.0882908142977,0,0,0,0.303127571446259,1.66435439510497,5.14063498660456,1.98486246255021,2.14846762603287,1.12264037773229,1.15325234330131,3.58195074346692,0.321707842287215,1.48418066444991,0.308419387605311,0.355123450626254,0.492762936082855,0,0.232420756919918,0.966875596732978,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0.451199612907412,0.385076685522074,1.56869953835371,1.46139224653261,0.844413031143006,1.13733384070897,0.850468526382578,2.37507507712353,1.54227252690289,4.06419656315779,0.501689773854853,0.254876273045038,0,1.79099803777743,0,0,0,6.23227826829441,5.85681110395745,2.16386124460217,0.27470839445503,0,0,0,0,0.676695028044854,1.69453478826109,1.68854042198743,0.964856007391714,2.47066563197029,2.0302337147992,0.681813019328807,0.712256285173899,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0,0,0,0.55597265731176,0.143124886741991,1.86079184679834,0,0.190630193923825,0.767693373934002,1.28381696410176,0.636406495851874,0,1.2591072030832,0.274537029736055,0.353437207037059,1.01091240786658,1.58510321173008,0.421258456238981,0,0,0,0.272999822815972,0.707027159768564,0,0.551365343546124,0,0,1.15755106853338,1.9676842561399,0.811641507850816,0.30982349809975,1.12678241012897,0.717056761020258,1.8667317792493,0.7133421029625,0,0.211107635297664,1.97576935775941,1.51789269506286,3.84928192269481,0.0962221127255121,0,0,1.22386941009813,0.86101074534246,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.18714054040822,1.31857361344705,0,0,0,0,0,0,0.994147647766298,1.68803299692615,0.445234820091624,0,0,4.18420775327246,3.31540698637377,0,6.95427041014653,0,0.311039587661807,0.988551862620595,2.50629644545853,0,13.1195729497122,0,3.33410970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| |||
|short_description=p4@ST5 | |||
}} |
Revision as of 06:28, 11 January 2014
Short description: | p4@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST5_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 0bp_to_ENST00000533020_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PKE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.34e-07 | 7 |
macroglial cell | 5.34e-07 | 7 |
astrocyte | 5.34e-07 | 7 |
oligodendrocyte precursor cell | 5.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.19e-10 | 114 |
sac | 6.17e-10 | 26 |
digestive tract diverticulum | 1.20e-09 | 23 |
neural plate | 1.38e-09 | 82 |
presumptive neural plate | 1.38e-09 | 82 |
epithelium of foregut-midgut junction | 1.83e-09 | 25 |
anatomical boundary | 1.83e-09 | 25 |
hepatobiliary system | 1.83e-09 | 25 |
foregut-midgut junction | 1.83e-09 | 25 |
septum transversum | 1.83e-09 | 25 |
epithelial sac | 3.06e-09 | 25 |
primordium | 5.39e-09 | 160 |
hepatic diverticulum | 6.14e-09 | 22 |
liver primordium | 6.14e-09 | 22 |
structure with developmental contribution from neural crest | 7.22e-09 | 132 |
neurectoderm | 1.53e-08 | 86 |
liver | 1.68e-08 | 19 |
digestive gland | 1.68e-08 | 19 |
liver bud | 1.68e-08 | 19 |
abdominal segment of trunk | 8.55e-08 | 60 |
abdomen | 8.55e-08 | 60 |
organ system subdivision | 2.70e-07 | 223 |