FFCP PHASE1:Hg19::chr15:39873352..39873390,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39873352..39873390,- | |||
|id=chr15:39873352..39873390,- | |||
|ontology_enrichment_celltype=CL:0000057!9.60e-17!75;CL:0000055!9.98e-17!180;CL:0002371!9.98e-14!591;CL:0002139!1.03e-13!24;CL:0000115!3.23e-12!35;CL:0000222!5.51e-12!119;CL:0000071!1.23e-10!18;CL:0002546!1.23e-10!18;CL:0000144!1.54e-10!625;CL:0002078!1.65e-10!44;CL:0000220!9.32e-10!246;CL:0002321!2.57e-09!248;CL:0000548!7.08e-09!679;CL:0000004!7.08e-09!679;CL:0000255!7.08e-09!679;CL:0000012!2.43e-08!682;CL:0000213!3.79e-08!57;CL:0000215!3.79e-08!57;CL:0002620!5.58e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.55e-18;24!CL:0000071;3.38e-14;18!CL:0000115;1.21e-12;36!CL:0002078;2.26e-08;45!CL:1000413;4.49e-08;9!CL:0002620;9.94e-08;23!CL:0000349;2.80e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.37e-18,24;CL:0000057,1.91e-17,76;CL:0000115,5.46e-15,36;CL:0000071,2.85e-14,18;CL:0002546,2.85e-14,18;CL:0002078,9.53e-12,45;CL:0000222,8.06e-10,121;CL:0000213,7.45e-09,58;CL:0000215,7.45e-09,58;CL:1000413,4.15e-08,9;CL:0002620,6.93e-08,23;CL:0000349,2.66e-07,19;CL:0002321,9.48e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;3.38e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.79e-18!84;UBERON:0000055!8.57e-17!69;UBERON:0002049!3.41e-16!79;UBERON:0007798!3.41e-16!79;UBERON:0001009!9.55e-16!113;UBERON:0004535!3.04e-15!110;UBERON:0000468!1.20e-14!659;UBERON:0001981!1.44e-14!60;UBERON:0007500!1.44e-14!60;UBERON:0004537!1.44e-14!60;UBERON:0006965!1.44e-14!60;UBERON:0003914!6.99e-13!118;UBERON:0000480!1.75e-12!626;UBERON:0000467!2.30e-12!625;UBERON:0001986!1.23e-10!18;UBERON:0004638!1.23e-10!18;UBERON:0004852!1.23e-10!18;UBERON:0001637!2.25e-10!42;UBERON:0003509!2.25e-10!42;UBERON:0004572!2.25e-10!42;UBERON:0000490!3.27e-10!138;UBERON:0000487!1.03e-09!22;UBERON:0000926!1.31e-09!448;UBERON:0004120!1.31e-09!448;UBERON:0006603!1.31e-09!448;UBERON:0003102!2.38e-09!95;UBERON:0006914!4.56e-09!25;UBERON:0002199!7.05e-08!45;UBERON:0002416!7.05e-08!45;UBERON:0003081!7.28e-08!216;UBERON:0004573!8.94e-08!33;UBERON:0004571!8.94e-08!33;UBERON:0002100!9.42e-08!216;UBERON:0000486!1.64e-07!82;UBERON:0000914!5.16e-07!83;UBERON:0002329!5.16e-07!83;UBERON:0003077!5.16e-07!83;UBERON:0003059!5.16e-07!83;UBERON:0007282!5.16e-07!83;UBERON:0009618!5.16e-07!83;UBERON:0007285!5.16e-07!83;UBERON:0004923!7.74e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.38e-14;18!UBERON:0001986;3.38e-14;18!UBERON:0004852;3.38e-14;18!UBERON:0000487;7.88e-12;22!UBERON:0001637;5.40e-11;42!UBERON:0003509;5.40e-11;42!UBERON:0004572;5.40e-11;42!UBERON:0006914;1.50e-10;25!UBERON:0000055;4.55e-10;65!UBERON:0007500;1.11e-09;56!UBERON:0001981;1.11e-09;56!UBERON:0004537;1.11e-09;56!UBERON:0004573;2.30e-08;33!UBERON:0004571;2.30e-08;33!UBERON:0003915;4.49e-08;9!UBERON:0004700;4.49e-08;9!UBERON:0001917;4.49e-08;9!UBERON:0000490;6.27e-08;33!UBERON:0002097;1.20e-07;41!UBERON:0002199;1.87e-07;46!UBERON:0002416;1.87e-07;46!UBERON:0002049;4.03e-07;75!UBERON:0007798;4.03e-07;75!UBERON:0003102;6.41e-07;50!UBERON:0003688;7.13e-07;6!UBERON:0002358;7.13e-07;6!UBERON:0003684;7.13e-07;6!UBERON:0001178;7.13e-07;6!UBERON:0000305;9.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.75e-19,83;UBERON:0000055,2.28e-18,68;UBERON:0007500,3.22e-16,59;UBERON:0001981,3.22e-16,59;UBERON:0004537,3.22e-16,59;UBERON:0006965,3.22e-16,59;UBERON:0002049,1.64e-15,78;UBERON:0007798,1.64e-15,78;UBERON:0004638,2.85e-14,18;UBERON:0001986,2.85e-14,18;UBERON:0004852,2.85e-14,18;UBERON:0001009,7.87e-14,112;UBERON:0004535,1.56e-13,109;UBERON:0001637,3.56e-13,42;UBERON:0003509,3.56e-13,42;UBERON:0004572,3.56e-13,42;UBERON:0003914,1.81e-12,117;UBERON:0000487,6.58e-12,22;UBERON:0002199,2.69e-11,46;UBERON:0002416,2.69e-11,46;UBERON:0006914,9.97e-11,25;UBERON:0003102,2.33e-10,99;UBERON:0004923,3.31e-10,66;UBERON:0002097,7.70e-10,41;UBERON:0003081,2.27e-09,203;UBERON:0004573,2.58e-09,33;UBERON:0004571,2.58e-09,33;UBERON:0003915,4.15e-08,9;UBERON:0004700,4.15e-08,9;UBERON:0001917,4.15e-08,9;UBERON:0000926,7.80e-08,315;UBERON:0004120,7.80e-08,315;UBERON:0006603,7.80e-08,315;UBERON:0004871,1.97e-07,8;UBERON:0005631,2.05e-07,14;UBERON:0000158,2.05e-07,14;UBERON:0000490,4.37e-07,148;UBERON:0003688,6.70e-07,6;UBERON:0002358,6.70e-07,6;UBERON:0003684,6.70e-07,6;UBERON:0001178,6.70e-07,6;UBERON:0000305,8.84e-07,7 | |||
|phase1_expression=23.6181893051724,19.0549466262975,12.2630331563495,15.0109947529696,5.81049422755474,14.8297549097063,17.7309914717817,1.26343974685366,0.261185628199839,0.982935746006035,0.697801167972428,3.9319446983431,5.53910654279752,0.247532705920093,1.32558950291166,2.6893005858071,0,0.730310090387373,2.92759679274304,0.123121058076788,0.612002073732759,0.313454721478088,0,0.273748850145768,1.25542639594803,0,0,0,0,0,2.01260960310899,0,4.51808878167375,0.739508020333575,0,0,0,0.553995408531877,2.80762226458198,1.08505435357926,0,0.647787332037959,0.257575567634187,1.16318591023652,0,0.242584061187816,3.0215774797739,0.411167888021826,0.619412741790207,3.45230870786581,0.768482119587302,0,2.06847408441971,0,0,2.44715041405386,1.36453075028923,0.224723484445085,6.12167784741805,0.320929027076094,0.639337125799041,2.63881040149373,0.199463657621632,0.426224750532694,6.67481248845743,1.13477044938228,0.622822248995575,3.01498398308092,0.521482918420201,0,3.02699751316684,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,3.06870148424473,0.361439152384566,4.51204119572301,3.33146993609895,0,6.32625331393427,0.0945348171640679,0.443458794925128,0.527008714158756,0.261958150995425,1.45718115317017,1.11235332835329,0,0,0,0,0,0,1.78886166630035,3.4409383804245,10.4142150482278,6.21838736116411,8.38998872419812,7.15306909044175,9.19577852761967,3.6178346283706,3.5576626268671,7.02913286805807,1.20848795132744,6.84244895146661,9.51842024437861,4.04429388380456,12.1521292182264,3.83988831621543,5.61323431565425,7.77019215334923,13.7984973719295,3.79706263827252,6.41206103756425,0,0,0.436094052142534,37.7698683288442,8.1043527465331,10.8575528266839,4.30254931123221,4.61068896857864,3.36406560085384,4.2699598291882,17.5133959376184,1.8672662123986,1.48181739276657,1.9615428373615,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0.896692083310806,0.117434498643765,0.161872944368132,0,0.408308342509787,1.10550885580591,1.13658359293342,14.2560342873846,18.7922866251703,0,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,7.90159717585508,13.1789752193578,25.5404700141215,1.47461838108027,17.9389635688862,17.9388206607597,7.84148034290379,9.00273288253207,2.67936576019941,11.3361837620077,6.70020682793723,8.43881661206331,2.33848812386877,7.82544700156755,8.83679026966074,1.77810662500693,9.23024940543197,1.81353776809752,4.40857540007268,1.54608682530637,1.90922284413584,1.14721838155602,0,0,0,0.10366105501537,0,0,21.9029345261742,9.64861407289328,6.90674606762403,6.50115099244771,3.60939740834793,0,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,1.97550513735526,1.1240175325762,2.01057944823262,1.29623823221941,0.325808305310325,3.11980435583874,1.44331342025273,0,0.821860859650752,7.79578817909799,6.01881166349594,7.22965778491473,0.790204397959275,0.858486162094873,0,0,0,0,2.35174979478403,1.55952606966625,1.70161193135412,1.45316969256981,5.75074018747817,0,0,0,0,0,0.253991577168676,0,0,0,0.925447434329912,0,0,0,0,0.07333828582095,0.775630294546667,0,2.535908257668,7.71220538096124,5.2003718455683,0.771622122786426,0,0.799266537048298,1.00084595560703,0,2.46972101034231,0,0.355391948742546,0,0,0.871533458600294,0,0,0,0,4.55287225434007,1.14861935834114,0,1.73737568001095,1.02738161275192,1.43248770591916,0.112085143993527,0,0.215627574859517,0,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,2.99161459204025,0,0.36807447515742,1.00034104211935,0.542530047399471,11.4383973841944,10.1704523614382,9.77754973210395,20.4997476237248,5.71797589482666,2.27407504055985,2.0694614258501,1.99267679560631,4.42486004500088,3.73599542212756,0.587403472388222,0,0.620304078368662,0.215714200818617,0.320182673410333,2.42502057157008,1.66435439510497,9.37409909322009,11.6610669674825,59.082859715904,28.0660094433074,6.53509661204075,11.7692667285342,20.7501558275254,7.42090332224955,1.3878872442239,8.5229628150301,0.492762936082855,0.519254429183621,0.929683027679674,0.241718899183244,7.01772646061497,1.19705285616665,0.918515585316854,0.364182336013434,1.57349297951309,0,0,0,0,0.105551628892876,3.4120015221269,1.02056223165909,6.69339339916632,9.25363516141736,0.270946437543853,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0,1.72279661398852,1.95018073810956,4.82051789532479,0.193341436584244,0.154048617114644,0,0.689182862422653,0.322260734604821,1.0151168573996,0.681813019328807,0.445160178233687,1.98341898433174,4.42037154939744,6.12541019974004,0.4046311234222,0,3.46293581513704,0,1.23213432070436,2.66153015158511,0,5.18907813490976,1.28812398067792,0.372158369359667,2.53103539774981,0.7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| |||
|short_description=p@chr15:39873352..39873390,- | |||
}} |
Revision as of 22:53, 11 January 2014
Short description: | p@chr15:39873352..39873390, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39873352..39873390, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.37e-18 | 24 |
fibroblast | 1.91e-17 | 76 |
endothelial cell | 5.46e-15 | 36 |
blood vessel endothelial cell | 2.85e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.85e-14 | 18 |
meso-epithelial cell | 9.53e-12 | 45 |
mesodermal cell | 8.06e-10 | 121 |
lining cell | 7.45e-09 | 58 |
barrier cell | 7.45e-09 | 58 |
endothelial cell of artery | 4.15e-08 | 9 |
skin fibroblast | 6.93e-08 | 23 |
extraembryonic cell | 2.66e-07 | 19 |
embryonic cell | 9.48e-07 | 250 |