FFCP PHASE1:Hg19::chr15:39881152..39881262,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=103bp_to_ENST00000490247_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_4_at_THBS1_5end | |||
|id=chr15:39881152..39881262,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.41e-19!180;CL:0000222!4.56e-17!119;CL:0002371!6.87e-17!591;CL:0000057!1.58e-16!75;CL:0000220!2.55e-14!246;CL:0000144!4.18e-14!625;CL:0002321!1.12e-13!248;CL:0000115!6.43e-12!35;CL:0000548!7.09e-12!679;CL:0000004!7.09e-12!679;CL:0000255!7.09e-12!679;CL:0000012!9.80e-12!682;CL:0002139!2.30e-11!24;CL:0002078!4.56e-10!44;CL:0000213!6.78e-09!57;CL:0000215!6.78e-09!57;CL:0000071!1.16e-08!18;CL:0002546!1.16e-08!18;CL:0000680!1.19e-08!57;CL:0000056!1.19e-08!57;CL:0000355!1.19e-08!57;CL:0000192!2.13e-08!42;CL:0000514!2.13e-08!42;CL:0000187!4.83e-08!54;CL:0000359!6.64e-08!32;CL:0000183!6.95e-08!59;CL:0002334!3.59e-07!12;CL:0000393!6.10e-07!60;CL:0000211!6.10e-07!60;CL:0002620!7.60e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.32e-13;24!CL:0000115;2.11e-11;36!CL:0000071;1.11e-09;18!CL:0002334;6.00e-08;12!CL:0000349;9.43e-08;19!CL:0000359;2.11e-07;32!CL:0002078;2.40e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.08e-16,76;CL:0000222,1.18e-15,121;CL:0000115,2.37e-13,36;CL:0002139,9.95e-13,24;CL:0002321,1.07e-10,250;CL:0002078,1.44e-10,45;CL:0000071,1.18e-09,18;CL:0002546,1.18e-09,18;CL:0000213,2.13e-09,58;CL:0000215,2.13e-09,58;CL:0000723,2.28e-08,433;CL:0002334,5.89e-08,12;CL:0000048,6.05e-08,427;CL:0000359,8.36e-08,32;CL:0000349,9.59e-08,19;CL:0000034,1.90e-07,441;CL:0000680,2.31e-07,58;CL:0000056,2.31e-07,58;CL:0000355,2.31e-07,58;CL:0000192,2.66e-07,43;CL:0000514,2.66e-07,43;CL:0000187,9.99e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.72e-21!84;UBERON:0000055!4.56e-20!69;UBERON:0002049!9.12e-20!79;UBERON:0007798!9.12e-20!79;UBERON:0001981!6.45e-18!60;UBERON:0007500!6.45e-18!60;UBERON:0004537!6.45e-18!60;UBERON:0006965!6.45e-18!60;UBERON:0003914!8.84e-17!118;UBERON:0000468!9.08e-17!659;UBERON:0001009!1.11e-16!113;UBERON:0004535!1.86e-16!110;UBERON:0000467!1.23e-14!625;UBERON:0000480!1.23e-14!626;UBERON:0001637!2.29e-13!42;UBERON:0003509!2.29e-13!42;UBERON:0004572!2.29e-13!42;UBERON:0000490!9.18e-13!138;UBERON:0000926!3.86e-11!448;UBERON:0004120!3.86e-11!448;UBERON:0006603!3.86e-11!448;UBERON:0005256!7.82e-11!143;UBERON:0003081!1.74e-10!216;UBERON:0000914!2.66e-10!83;UBERON:0002329!2.66e-10!83;UBERON:0003077!2.66e-10!83;UBERON:0003059!2.66e-10!83;UBERON:0007282!2.66e-10!83;UBERON:0009618!2.66e-10!83;UBERON:0007285!2.66e-10!83;UBERON:0002100!2.92e-10!216;UBERON:0003102!3.86e-10!95;UBERON:0004573!3.93e-10!33;UBERON:0004571!3.93e-10!33;UBERON:0000486!4.85e-10!82;UBERON:0001986!1.16e-08!18;UBERON:0004638!1.16e-08!18;UBERON:0004852!1.16e-08!18;UBERON:0004290!1.41e-08!70;UBERON:0002199!1.62e-08!45;UBERON:0002416!1.62e-08!45;UBERON:0001134!3.65e-08!61;UBERON:0002036!3.65e-08!61;UBERON:0003082!3.65e-08!61;UBERON:0002385!3.95e-08!63;UBERON:0001015!3.95e-08!63;UBERON:0000383!3.95e-08!63;UBERON:0000487!6.07e-08!22;UBERON:0000477!1.49e-07!286;UBERON:0002097!1.53e-07!40;UBERON:0000947!1.92e-07!21;UBERON:0010191!1.92e-07!21;UBERON:0006914!2.44e-07!25;UBERON:0004923!2.66e-07!57;UBERON:0000475!3.66e-07!365;UBERON:0000923!4.28e-07!604;UBERON:0005291!4.28e-07!604;UBERON:0006598!4.28e-07!604;UBERON:0002532!4.28e-07!604;UBERON:0002050!6.45e-07!605;UBERON:0005423!6.45e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.37e-11;42!UBERON:0003509;5.37e-11;42!UBERON:0004572;5.37e-11;42!UBERON:0007500;8.03e-11;56!UBERON:0001981;8.03e-11;56!UBERON:0004537;8.03e-11;56!UBERON:0000055;2.57e-10;65!UBERON:0004638;1.11e-09;18!UBERON:0001986;1.11e-09;18!UBERON:0004852;1.11e-09;18!UBERON:0004573;2.04e-09;33!UBERON:0004571;2.04e-09;33!UBERON:0000487;1.29e-08;22!UBERON:0006914;5.03e-08;25!UBERON:0002049;1.08e-07;75!UBERON:0007798;1.08e-07;75!UBERON:0000947;2.57e-07;21!UBERON:0010191;2.57e-07;21!UBERON:0003914;3.75e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.07e-21,83;UBERON:0000055,4.42e-20,68;UBERON:0002049,8.51e-19,78;UBERON:0007798,8.51e-19,78;UBERON:0007500,1.66e-18,59;UBERON:0001981,1.66e-18,59;UBERON:0004537,1.66e-18,59;UBERON:0006965,1.66e-18,59;UBERON:0003914,1.22e-15,117;UBERON:0004535,2.97e-15,109;UBERON:0001009,3.47e-15,112;UBERON:0001637,8.38e-14,42;UBERON:0003509,8.38e-14,42;UBERON:0004572,8.38e-14,42;UBERON:0003081,9.49e-14,203;UBERON:0000926,3.90e-13,315;UBERON:0004120,3.90e-13,315;UBERON:0006603,3.90e-13,315;UBERON:0000490,2.72e-10,148;UBERON:0004573,3.55e-10,33;UBERON:0004571,3.55e-10,33;UBERON:0004638,1.18e-09,18;UBERON:0001986,1.18e-09,18;UBERON:0004852,1.18e-09,18;UBERON:0003102,2.63e-09,99;UBERON:0004923,6.36e-09,66;UBERON:0000487,1.38e-08,22;UBERON:0002199,1.50e-08,46;UBERON:0002416,1.50e-08,46;UBERON:0000486,1.89e-08,83;UBERON:0007503,2.15e-08,78;UBERON:0006914,4.08e-08,25;UBERON:0005256,1.70e-07,122;UBERON:0002097,1.84e-07,41;UBERON:0000947,2.48e-07,21;UBERON:0010191,2.48e-07,21;UBERON:0002329,6.19e-07,71;UBERON:0003059,6.19e-07,71;UBERON:0007282,6.19e-07,71;UBERON:0004290,6.19e-07,71;UBERON:0009618,6.19e-07,71;UBERON:0007524,6.34e-07,73;UBERON:0001134,6.55e-07,62;UBERON:0002036,6.55e-07,62;UBERON:0003082,6.55e-07,62 | |||
|phase1_expression=58.3187597458487,155.651080868745,39.7491419550639,81.0593716660356,29.499432232201,75.0211130726317,15.1979926900986,1.26343974685366,1.04474251279935,3.44027511102112,4.88460817580699,8.30077214094655,12.6608149549658,1.73272894144065,3.97676850873499,22.1867298329086,20.4916139528152,16.0668219885222,15.6138495612962,0.492484232307152,2.24400760368678,1.56727360739044,0.286235987131057,2.05311637609326,0.87879847716362,0,0,0,0.393364276848904,0.383829398097213,1.54816123316076,0.919421224478927,4.51808878167375,4.43704812200145,0,0,0,1.66198622559563,15.2413780077308,0.868043482863407,0,0.32389366601898,0.515151135268373,6.25212426752128,1.13362783106643,0.485168122375632,21.8483294691344,1.23350366406548,0.309706370895104,27.6184696629264,3.84241059793651,1.6553756092201,22.4084692478802,1.93645405075148,0,21.6478690473995,2.72906150057846,1.79778787556068,33.0570603760575,6.09765151444578,4.47535988059329,9.56568770541477,1.39624560335142,2.13112375266347,48.1747336123449,6.24123747160254,4.35975574296902,19.0948985595125,5.21482918420201,1.08594422352558,38.1401686659022,2.20966581592539,0.632924774881769,0.211255286311942,0.212604299965044,0,0.786300418025466,4.05477610672067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,2.01210257911091,6.13740296848946,2.89151321907653,12.5334477658972,7.53201898596283,1.5905718941022,8.75942766544745,0.567208902984407,2.21729397462564,0.527008714158756,0.392937226493138,1.45718115317017,1.48313777113772,0,0,0,0,0,0,7.15544666520138,5.16140757063675,11.4556365530506,16.3939303157963,15.5214791397665,34.1146372005684,28.4233154490062,6.46041897923322,8.89415656716776,21.7568398297036,16.9188313185842,11.4040815857777,29.7755710208767,21.3244586600604,53.4693685601961,15.716752177998,5.83776368828041,6.75668882899933,6.13266549863533,11.3911879148175,12.8241220751285,0,0,3.48875241714027,82.4973439814229,24.1864277279347,23.1716066423133,32.1257015238671,5.32002573297536,5.04609840128076,18.1473292740498,45.1401613603403,4.04574346019696,3.77189881795127,7.68270944633256,0.756787138224657,5.76175924479999,0,0.624320153660641,1.1409436430889,2.39117888882882,0.469737994575059,0,0.702254033511242,2.65400422631361,1.71968044236475,4.33968280938215,30.8880742893334,65.0312024002605,0.910161361938026,1.43723628363248,0,0.750711119231785,3.04770527032601,14.0472838681868,45.6666815740539,28.3949931333468,4.53728732640084,114.091808298116,34.5962969886079,33.6971722843703,39.0118424909723,26.6906050727557,49.7246242288064,26.6147104554173,27.0042131586026,30.8875306361,36.6028972653966,26.6024207076245,21.1756334432644,64.2567362455072,15.5158231270566,13.564847384839,3.67195621010264,9.27336810008838,5.44928731239107,0,0,0,0.207322110030741,0.504641701751257,0,45.3703643756466,74.6159488303747,13.8134921352481,22.754028473567,13.7157101517221,1.0647612003586,1.18009283054671,1.68707720918437,1.8749975364507,1.52515610864684,1.42362371466658,0.943819157121151,1.17732879075208,1.15424147083917,8.11971000087113,15.426595118379,0,4.41026134156626,0,0,1.18157981336281,0,0.122988438543114,1.3725424823882,10.9750285408626,5.62008766288098,4.72486170334665,4.72201070308501,0.325808305310325,2.07986957055916,2.88662684050547,0,1.17408694235822,22.0880665074443,34.7239134432458,39.0021012080926,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,21.8376766658517,7.3723050566041,7.16468181622786,4.35950907770943,11.5014803749563,0,0,0,0,0,0.190493682876507,0.381988425558278,0,3.4214489204541,2.15937734676979,0,0,0.897048674762886,0.87192013766656,0.4400297149257,3.87815147273333,0,1.690605505112,15.9562869950922,23.9217104896142,1.54324424557285,0,0.799266537048298,2.14466990487221,1.08524321078289,4.11620168390384,0.325736184293735,2.13235169245527,1.58390374586686,0,0.871533458600294,0,0,0,2.10833939483032,11.0227433526128,14.9320516584348,0,3.4747513600219,5.13690806375959,5.90901178691655,0,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.502548796003046,1.91381625495949,0,0,0,2.4538298343828,1.00034104211935,2.17012018959788,66.9666174129199,99.2065177712219,59.1384056377255,56.6964448564732,9.02838299183157,27.2889004867182,2.0694614258501,3.98535359121262,5.53107505625109,15.2915161463826,0,2.05886054286514,0.413536052245775,0.215714200818617,1.921096040462,4.54691357169389,6.65741758041988,12.0956117331872,54.5837177201309,110.492620767405,127.981003061482,36.2633792393634,54.2409684010706,62.0896135614325,38.5886972756977,16.9630663182921,13.8498145744239,1.31403449622095,8.82732529612156,6.97262270759755,0.483437798366489,33.083567600042,1.65745780084613,4.93702127107809,2.36718518408732,6.81846957789005,0.902399225814824,0,0,1.46139224653261,0.316654886678627,18.1973414513435,11.9065593693561,15.545945959354,78.6558988720476,0.541892875087706,2.50844886927427,1.01950509218015,0.831076008928724,0.671624264166535,0,0,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| |||
|short_description=p4@THBS1 | |||
}} |
Revision as of 22:55, 11 January 2014
Short description: | p4@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 103bp_to_ENST00000490247_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.08e-16 | 76 |
mesodermal cell | 1.18e-15 | 121 |
endothelial cell | 2.37e-13 | 36 |
endothelial cell of vascular tree | 9.95e-13 | 24 |
embryonic cell | 1.07e-10 | 250 |
meso-epithelial cell | 1.44e-10 | 45 |
blood vessel endothelial cell | 1.18e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.18e-09 | 18 |
lining cell | 2.13e-09 | 58 |
barrier cell | 2.13e-09 | 58 |
somatic stem cell | 2.28e-08 | 433 |
preadipocyte | 5.89e-08 | 12 |
multi fate stem cell | 6.05e-08 | 427 |
vascular associated smooth muscle cell | 8.36e-08 | 32 |
extraembryonic cell | 9.59e-08 | 19 |
stem cell | 1.90e-07 | 441 |
muscle precursor cell | 2.31e-07 | 58 |
myoblast | 2.31e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.31e-07 | 58 |
smooth muscle cell | 2.66e-07 | 43 |
smooth muscle myoblast | 2.66e-07 | 43 |
muscle cell | 9.99e-07 | 55 |