FFCP PHASE1:Hg19::chr17:46667628..46667642,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5114 | |||
|TSSclassifier=strong | |||
|UniProt=P14651 | |||
|association_with_transcript=0bp_to_ENST00000498678,uc010dbf.2,uc010dbg.2,uc010wlm.1_5end | |||
|coexpression_cluster_id=C2414 | |||
|description=CAGE_peak_2_at_HOXB3_5end | |||
|id=chr17:46667628..46667642,- | |||
|ontology_enrichment_celltype=CL:1000449!5.57e-16!16;CL:1000507!4.56e-15!12;CL:1000494!4.56e-15!12;CL:1000497!1.12e-13!18;CL:0002518!1.12e-13!18;CL:0002681!3.30e-12!13;CL:0002584!3.30e-12!13;CL:0002334!3.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.06e-16;10!CL:1000494;1.06e-16;10!CL:1000449;8.42e-13;15!CL:1000497;4.97e-11;17!CL:0002518;4.97e-11;17!CL:0002681;8.46e-08;12!CL:0002584;8.46e-08;12!CL:0002579;2.15e-07;3!CL:0000239;3.21e-07;3!CL:1000615;3.21e-07;3!CL:0002306;3.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.79e-17,10;CL:1000494,7.79e-17,10;CL:1000449,8.10e-13,15;CL:1000497,4.81e-11,17;CL:0002518,4.81e-11,17;CL:0002681,8.85e-08,12;CL:0002584,8.85e-08,12;CL:0002579,2.04e-07,3;CL:0000239,2.33e-07,3;CL:1000615,2.33e-07,3;CL:0002306,2.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.35e-19!21;UBERON:0000080!9.89e-19!18;UBERON:0002120!9.89e-19!18;UBERON:0004875!9.89e-19!18;UBERON:0005721!9.89e-19!18;UBERON:0005754!9.89e-19!18;UBERON:0007297!9.89e-19!18;UBERON:0002113!7.22e-18!27;UBERON:0003918!7.22e-18!27;UBERON:0005095!7.22e-18!27;UBERON:0007687!7.22e-18!27;UBERON:0006555!2.43e-17!17;UBERON:0005103!2.43e-17!17;UBERON:0000083!2.43e-17!17;UBERON:0009201!2.43e-17!17;UBERON:0004819!2.43e-17!17;UBERON:0006553!2.43e-17!17;UBERON:0003074!2.43e-17!17;UBERON:0003060!2.43e-17!17;UBERON:0002417!5.21e-17!61;UBERON:0000916!5.21e-17!61;UBERON:0000489!9.01e-17!32;UBERON:0004876!2.74e-16!20;UBERON:0004211!5.57e-16!16;UBERON:0001285!5.57e-16!16;UBERON:0007684!5.57e-16!16;UBERON:0003220!5.57e-16!16;UBERON:0004208!5.57e-16!16;UBERON:0009569!1.46e-15!113;UBERON:0001008!2.67e-15!45;UBERON:0009773!4.56e-15!12;UBERON:0001231!4.56e-15!12;UBERON:0004810!4.56e-15!12;UBERON:0002100!5.65e-15!216;UBERON:0000058!5.92e-15!26;UBERON:0006554!1.37e-14!44;UBERON:0005177!1.01e-12!107;UBERON:0003064!1.42e-12!37;UBERON:0005172!2.77e-12!55;UBERON:0005173!2.77e-12!55;UBERON:0001225!3.30e-12!13;UBERON:0008987!3.30e-12!13;UBERON:0003886!4.31e-12!63;UBERON:0000464!9.92e-12!104;UBERON:0003104!2.21e-10!238;UBERON:0009142!2.21e-10!238;UBERON:0000353!4.23e-10!17;UBERON:0002553!5.84e-10!70;UBERON:0000466!6.05e-10!126;UBERON:0005256!8.35e-10!143;UBERON:0001851!2.70e-09!16;UBERON:0003688!4.40e-08!6;UBERON:0002358!4.40e-08!6;UBERON:0003684!4.40e-08!6;UBERON:0001178!4.40e-08!6;UBERON:0000059!5.67e-08!11;UBERON:0004457!7.25e-08!12;UBERON:0000042!7.25e-08!12;UBERON:0004175!7.83e-08!25;UBERON:0005409!1.25e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.06e-16;10!UBERON:0009773;1.06e-16;10!UBERON:0001231;1.06e-16;10!UBERON:0004810;1.06e-16;10!UBERON:0002113;7.65e-15;24!UBERON:0011143;7.65e-15;24!UBERON:0006555;8.42e-13;15!UBERON:0004819;8.42e-13;15!UBERON:0001285;8.42e-13;15!UBERON:0007684;8.42e-13;15!UBERON:0000489;1.16e-11;29!UBERON:0006554;3.74e-11;30!UBERON:0001008;3.74e-11;30!UBERON:0004175;4.24e-09;21!UBERON:0003688;6.00e-09;6!UBERON:0002358;6.00e-09;6!UBERON:0003684;6.00e-09;6!UBERON:0001178;6.00e-09;6!UBERON:0006947;1.42e-08;3!UBERON:0004054;1.42e-08;3!UBERON:0004457;5.17e-08;9!UBERON:0000042;5.17e-08;9!UBERON:0001225;8.46e-08;12!UBERON:0008987;8.46e-08;12!UBERON:0006853;3.21e-07;3!UBERON:0007685;3.21e-07;3!UBERON:0004134;3.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.98e-18,26;UBERON:0003918,1.98e-18,26;UBERON:0011143,1.98e-18,26;UBERON:0005095,1.98e-18,26;UBERON:0007687,1.98e-18,26;UBERON:0004810,7.79e-17,10;UBERON:0000489,9.64e-15,31;UBERON:0006555,1.04e-14,16;UBERON:0004819,1.04e-14,16;UBERON:0004211,8.10e-13,15;UBERON:0009773,8.10e-13,15;UBERON:0001231,8.10e-13,15;UBERON:0001285,8.10e-13,15;UBERON:0007684,8.10e-13,15;UBERON:0004208,8.10e-13,15;UBERON:0009569,2.24e-12,112;UBERON:0002417,4.27e-12,60;UBERON:0000916,4.27e-12,60;UBERON:0006554,1.03e-10,47;UBERON:0001008,2.15e-10,48;UBERON:0005177,1.25e-09,101;UBERON:0003688,7.96e-09,6;UBERON:0002358,7.96e-09,6;UBERON:0003684,7.96e-09,6;UBERON:0001178,7.96e-09,6;UBERON:0004175,7.96e-09,25;UBERON:0002100,8.41e-09,199;UBERON:0006947,1.46e-08,3;UBERON:0004054,1.46e-08,3;UBERON:0004457,6.65e-08,12;UBERON:0000042,6.65e-08,12;UBERON:0005172,8.25e-08,54;UBERON:0005173,8.25e-08,54;UBERON:0001225,8.85e-08,12;UBERON:0008987,8.85e-08,12;UBERON:0006853,2.33e-07,3;UBERON:0007685,2.33e-07,3;UBERON:0004134,2.33e-07,3;UBERON:0003104,8.09e-07,160;UBERON:0009142,8.09e-07,160 | |||
|phase1_expression=0,0.428201047781966,2.53717927372748,1.0007329835313,0.893922188854576,0,0,0,1.04474251279935,4.17747692052565,0.697801167972428,0,0,0.618831764800233,2.65117900582333,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,4.48406850385229,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94283284717341,7.04606991862589,6.63679071909339,4.77532742787645,0,0,0,0,0,3.64064544775211,7.90479955997862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3586462339552,4.38466523225394,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.736148950314839,5.50187573165645,4.6115054028955,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0.306923946576125,0.561320188866147,3.20347873139252,2.55853624533352,3.86049410744658,0,1.23367755042124,0.532685175939381,1.56041596426237,0,1.16210378459959,0.725156697549733,0.40101294060657,0,0.229628896329213,0,0,3.60959690325929,1.38627606787947,6.27479815341484,13.1525302187935,2.74434235121477,1.13733384070897,0.170093705276516,0.215915916102139,0,0.812839312631559,2.00675909541941,3.56826782263054,1.66215201785745,4.92524460388792,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,1.39453664789186,1.5740617341532,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,6.39744478278335,11.1264136888819,0,0,0.899362287916574,2.47083326762449,3.06312246098785,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,1.00387946542836,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62024897805978,0,14.0398589056729,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83031449570902,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,1.61595542857974,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.14994833854341,1.83309043480088,0,0,0,0,0,0,0,0,0.728341138602278,22.8858953652647,0,0,0,2.70582154946087,2.07376382794494,0,0,0,0,3.69992409838731,4.16024019039416,0,0,0,15.2012201370566,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0.114536596165916,6.17741992303072,0,1.98804056904692,0,4.89255141865011,5.85775939349066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,2.67939404817274,15.6314672642294,1.26720403823288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,6.13096789888697,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0.303298235083296,0,0,0,0.434763085832475,0.597019211547496,0.233713309847224,1.10961172300523,0,0,0,0,0,0,0,0,0,0,0,2.65841714557995,0,0,1.14241563650639,0,0,0.107410557042488,0,0,0,2.40376993627955,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,1.60114149657094,0,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,1.75871244359621,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,1.25588948560822,0,1.40136081656895,1.82631744101899,0,0,0,0,1.04617282831313,0.173858272302579,0,0,0,0,0,0,0,29.2137064631741,0,1.5510319283216,4.77769469488717,0,9.52057266067857,0,0,0,0,0.485710993059139,11.4630337096432,0,0,0,0,7.397179334767,0.694567422971502,0.874238242015829,6.58444214906132,0,9.19138533696341,0.392616934229891,0,0,0,0.939839179798536,4.96325737396544,0,0,0,0,0,0,0,1.41994405973866,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0.213454691755431,0,0,0,2.2003459952916,2.03448089157869,0.665756774185513,0,0 | |||
|short_description=p2@HOXB3 | |||
}} |
Revision as of 16:00, 20 January 2014
Short description: | p2@HOXB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB3_5end |
Coexpression cluster: | C2414_kidney_smallcell_seminal_somatostatinoma_ductus_small_Fibroblast |
Association with transcript: | 0bp_to_ENST00000498678, uc010dbf.2, uc010dbg.2, uc010wlm.1_5end |
EntrezGene: | HOXB3 |
HGNC: | 5114 |
UniProt: | P14651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.79e-17 | 10 |
nephron tubule epithelial cell | 7.79e-17 | 10 |
epithelial cell of nephron | 8.10e-13 | 15 |
kidney cell | 4.81e-11 | 17 |
kidney epithelial cell | 4.81e-11 | 17 |
kidney cortical cell | 8.85e-08 | 12 |
renal cortical epithelial cell | 8.85e-08 | 12 |
omentum preadipocyte | 2.04e-07 | 3 |
brush border epithelial cell | 2.33e-07 | 3 |
kidney cortex tubule cell | 2.33e-07 | 3 |
epithelial cell of proximal tubule | 2.33e-07 | 3 |