FFCP PHASE1:Hg19::chr1:212004090..212004168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28985 | |||
|TSSclassifier=strong | |||
|UniProt=Q92604,Q53YL2 | |||
|association_with_transcript=0bp_to_ENST00000366997,NM_014873,uc001hiv.2_5end | |||
|description=CAGE_peak_1_at_LPGAT1_5end | |||
|id=chr1:212004090..212004168,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-12!115;UBERON:0003080!3.45e-11!42;UBERON:0000955!5.13e-11!69;UBERON:0006238!5.13e-11!69;UBERON:0001869!6.42e-11!32;UBERON:0002780!7.96e-11!41;UBERON:0001890!7.96e-11!41;UBERON:0006240!7.96e-11!41;UBERON:0000073!4.22e-10!94;UBERON:0001016!4.22e-10!94;UBERON:0001893!7.79e-10!34;UBERON:0001950!8.36e-10!20;UBERON:0001017!9.58e-10!82;UBERON:0002619!1.47e-09!22;UBERON:0002791!2.56e-09!33;UBERON:0002020!3.12e-09!34;UBERON:0003528!3.12e-09!34;UBERON:0005743!4.11e-09!86;UBERON:0001049!6.54e-09!57;UBERON:0005068!6.54e-09!57;UBERON:0006241!6.54e-09!57;UBERON:0007135!6.54e-09!57;UBERON:0000956!7.01e-09!25;UBERON:0000203!7.01e-09!25;UBERON:0002616!5.35e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.06e-10;32!UBERON:0001950;8.77e-10;20!UBERON:0002619;1.64e-09;22!UBERON:0002791;4.70e-09;32!UBERON:0001893;6.07e-09;34!UBERON:0000956;7.01e-09;25!UBERON:0000203;7.01e-09;25!UBERON:0003528;1.21e-08;34!UBERON:0002020;1.21e-08;34!UBERON:0002780;4.78e-08;41!UBERON:0001890;4.78e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.12e-12,114;UBERON:0001869,6.42e-11,32;UBERON:0002780,7.96e-11,41;UBERON:0001890,7.96e-11,41;UBERON:0003080,7.96e-11,41;UBERON:0006240,7.96e-11,41;UBERON:0000955,1.10e-10,68;UBERON:0006238,1.10e-10,68;UBERON:0001016,1.96e-10,89;UBERON:0001893,7.79e-10,34;UBERON:0001950,8.36e-10,20;UBERON:0002619,1.47e-09,22;UBERON:0002791,1.73e-09,32;UBERON:0001017,1.92e-09,81;UBERON:0003528,3.12e-09,34;UBERON:0002020,3.12e-09,34;UBERON:0000956,7.01e-09,25;UBERON:0000203,7.01e-09,25;UBERON:0000073,9.98e-09,53;UBERON:0002616,9.98e-09,53;UBERON:0001049,1.37e-08,56;UBERON:0005068,1.37e-08,56;UBERON:0006241,1.37e-08,56;UBERON:0007135,1.37e-08,56;UBERON:0011216,2.46e-08,223 | |||
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| |||
|short_description=p1@LPGAT1 | |||
}} |
Revision as of 00:05, 11 January 2014
Short description: | p1@LPGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPGAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366997, NM_014873, uc001hiv.2_5end |
EntrezGene: | LPGAT1 |
HGNC: | 28985 |
UniProt: | Q92604Q53YL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.12e-12 | 114 |
cerebral hemisphere | 6.42e-11 | 32 |
regional part of forebrain | 7.96e-11 | 41 |
forebrain | 7.96e-11 | 41 |
anterior neural tube | 7.96e-11 | 41 |
future forebrain | 7.96e-11 | 41 |
brain | 1.10e-10 | 68 |
future brain | 1.10e-10 | 68 |
nervous system | 1.96e-10 | 89 |
telencephalon | 7.79e-10 | 34 |
neocortex | 8.36e-10 | 20 |
regional part of cerebral cortex | 1.47e-09 | 22 |
regional part of telencephalon | 1.73e-09 | 32 |
central nervous system | 1.92e-09 | 81 |
brain grey matter | 3.12e-09 | 34 |
gray matter | 3.12e-09 | 34 |
cerebral cortex | 7.01e-09 | 25 |
pallium | 7.01e-09 | 25 |
regional part of nervous system | 9.98e-09 | 53 |
regional part of brain | 9.98e-09 | 53 |
neural tube | 1.37e-08 | 56 |
neural rod | 1.37e-08 | 56 |
future spinal cord | 1.37e-08 | 56 |
neural keel | 1.37e-08 | 56 |
organ system subdivision | 2.46e-08 | 223 |