FFCP PHASE1:Hg19::chr1:56046771..56046801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q6ZSN9 | |||
|association_with_transcript=61bp_to_ENST00000422374,uc001cyi.1_5end | |||
|description=CAGE_peak_1_at_ENST00000422374_5end,CAGE_peak_1_at_uc001cyi.1_5end | |||
|id=chr1:56046771..56046801,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.49e-07!23;CL:0000057!2.06e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.29e-11;2!CL:0000680;1.60e-11;7!CL:0002602;3.68e-11;2!CL:0002552;2.93e-09;5!CL:0000515;1.03e-07;3!CL:0000594;2.26e-07;3!CL:0000214;2.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.08e-11,2;CL:0002602,4.75e-11,2;CL:0002552,2.05e-09,5;CL:0000214,1.59e-07,3;CL:0000594,2.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-16!115;UBERON:0000475!3.35e-10!365;UBERON:0001049!2.38e-09!57;UBERON:0005068!2.38e-09!57;UBERON:0006241!2.38e-09!57;UBERON:0007135!2.38e-09!57;UBERON:0004121!4.59e-08!169;UBERON:0002298!1.19e-07!8;UBERON:0003075!1.20e-07!86;UBERON:0007284!1.20e-07!86;UBERON:0000924!1.45e-07!173;UBERON:0006601!1.45e-07!173;UBERON:0005174!1.57e-07!5;UBERON:0001137!1.57e-07!5;UBERON:0000468!3.13e-07!659;UBERON:0003102!4.80e-07!95;UBERON:0000153!5.85e-07!129;UBERON:0007811!5.85e-07!129;UBERON:0002346!6.33e-07!90;UBERON:0003076!7.63e-07!15;UBERON:0003057!7.63e-07!15;UBERON:0000033!9.65e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.07e-15;8!UBERON:0000982;3.07e-15;8!UBERON:0004770;3.07e-15;8!UBERON:0005933;1.29e-11;2!UBERON:0005942;1.29e-11;2!UBERON:0005932;1.29e-11;2!UBERON:0006444;3.68e-11;2!UBERON:0001995;3.68e-11;2!UBERON:0004715;3.68e-11;2!UBERON:0011135;1.46e-09;5!UBERON:0002216;1.46e-09;5!UBERON:0011134;1.46e-09;5!UBERON:0002209;1.46e-09;5!UBERON:0002213;1.46e-09;5!UBERON:0007844;1.46e-09;5!UBERON:0011138;1.46e-09;5!UBERON:0001130;1.46e-09;5!UBERON:0001066;1.46e-09;5!UBERON:0001468;1.46e-09;5!UBERON:0002418;1.03e-07;3!UBERON:0004755;1.03e-07;3!UBERON:0001134;1.72e-07;16!UBERON:0002036;1.72e-07;16!UBERON:0001896;2.26e-07;3!UBERON:0006915;2.26e-07;3!UBERON:0007616;2.26e-07;3!UBERON:0002217;2.26e-07;3!UBERON:0002018;2.26e-07;3!UBERON:0005290;2.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.32e-15,8;UBERON:0000982,2.32e-15,8;UBERON:0004770,2.32e-15,8;UBERON:0005933,1.08e-11,2;UBERON:0005942,1.08e-11,2;UBERON:0005932,1.08e-11,2;UBERON:0006444,4.75e-11,2;UBERON:0001995,4.75e-11,2;UBERON:0004715,4.75e-11,2;UBERON:0011135,1.53e-09,5;UBERON:0002216,1.53e-09,5;UBERON:0011134,1.53e-09,5;UBERON:0002209,1.53e-09,5;UBERON:0002213,1.53e-09,5;UBERON:0005856,1.53e-09,5;UBERON:0005866,1.53e-09,5;UBERON:0005863,1.53e-09,5;UBERON:0007844,1.53e-09,5;UBERON:0011138,1.53e-09,5;UBERON:0001130,1.53e-09,5;UBERON:0001066,1.53e-09,5;UBERON:0001468,1.53e-09,5;UBERON:0002418,1.22e-07,3;UBERON:0004755,1.22e-07,3;UBERON:0006915,1.59e-07,3;UBERON:0007616,1.59e-07,3;UBERON:0002217,1.59e-07,3;UBERON:0002018,1.59e-07,3;UBERON:0001896,1.69e-07,3;UBERON:0005290,1.69e-07,3;UBERON:0010096,1.69e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,1.58260186937072,1.23766352960047,3.31397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0,0.189069634328136,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.647491777472526,0.280901613404497,1.63323337003915,0,1.96318984233954,1.18800285728205,0.247266929278557,0,0,0,0.375355559615893,0.554128230968366,0.877955241761676,1.22595118319608,0.751190294532984,0.113432183160021,0.538168907066586,0.213557388818567,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.828449087780694,0.484938170456436,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,2.78620756819187,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,1.3321108950805,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,3.76431397335706,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0,0.542530047399471,0.207970861530807,1.07057393278297,0.157702415033935,1.05427273493442,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,1.21251028578504,0,0.907170879989041,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.616194468458578,1.07452572308291,0.137836572484531,1.39646318328756,1.16013355131383,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,0.655894752046633,0,0,0,0.143411352204052,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,1.53580351049616,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.394573622547734,0,2.22273980289274,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0,0,0.846452843541768,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.568679216656392,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,1.11712960508902,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,1.72022758707021,1.33114861844223,0.993542447062135,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.863424021355654,0,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.6828739083758,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.981542335574726,2.0793248022896,0.4226557275834,0,0,0,0,0,0,0,0,0,1.29005624836306,0,0.0679914901909147,0,0,0.743990036333503,2.31087814315709,0.865253124247578,0,0,0,0,0,0,0,2.72803313585662,3.48353369203032,0,0.20686599172379,0.852935927603924,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0.733448665097199,2.44137706989443,1.33151354837103,0.201273793591026,0 | |||
|short_description=p1@ENST00000422374,p1@uc001cyi.1 | |||
}} |
Revision as of 18:39, 10 January 2014
Short description: | p1@ENST00000422374, p1@uc001cyi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000422374_5end, CAGE_peak_1_at_uc001cyi.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000422374, uc001cyi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.08e-11 | 2 |
annulus pulposus cell | 4.75e-11 | 2 |
fibroblast of gingiva | 2.05e-09 | 5 |
synovial cell | 1.59e-07 | 3 |
skeletal muscle satellite cell | 2.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.32e-15 | 8 |
skeletal joint | 2.32e-15 | 8 |
articular system | 2.32e-15 | 8 |
hair root sheath | 1.08e-11 | 2 |
hair outer root sheath | 1.08e-11 | 2 |
bulb of hair follicle | 1.08e-11 | 2 |
annulus fibrosus | 4.75e-11 | 2 |
fibrocartilage | 4.75e-11 | 2 |
annulus fibrosus disci intervertebralis | 4.75e-11 | 2 |
intervertebral cartilage | 1.53e-09 | 5 |
symphysis | 1.53e-09 | 5 |
nonsynovial joint | 1.53e-09 | 5 |
fibrous joint | 1.53e-09 | 5 |
cartilaginous joint | 1.53e-09 | 5 |
developing mesenchymal condensation | 1.53e-09 | 5 |
pre-cartilage condensation | 1.53e-09 | 5 |
cartilaginous condensation | 1.53e-09 | 5 |
cartilage element | 1.53e-09 | 5 |
post-cranial axial skeletal system | 1.53e-09 | 5 |
vertebral column | 1.53e-09 | 5 |
intervertebral disk | 1.53e-09 | 5 |
intervertebral joint | 1.53e-09 | 5 |
cartilage tissue | 1.22e-07 | 3 |
skeletal tissue | 1.22e-07 | 3 |
stratified squamous epithelium | 1.59e-07 | 3 |
layer of synovial tissue | 1.59e-07 | 3 |
synovial joint | 1.59e-07 | 3 |
synovial membrane of synovial joint | 1.59e-07 | 3 |
medulla oblongata | 1.69e-07 | 3 |
myelencephalon | 1.69e-07 | 3 |
future myelencephalon | 1.69e-07 | 3 |