FFCP PHASE1:Hg19::chr2:201980995..201981024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000342795_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CFLAR_5end | |||
|id=chr2:201980995..201981024,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.59e-24!42;CL:0000860!3.34e-21!45;CL:0000766!2.29e-19!76;CL:0002009!4.00e-17!65;CL:0002194!2.22e-16!63;CL:0000576!2.22e-16!63;CL:0000040!2.22e-16!63;CL:0000559!2.22e-16!63;CL:0000557!5.60e-16!71;CL:0000839!9.97e-14!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.78e-19;33!CL:0002057;5.78e-19;33!CL:0000473;7.80e-17;39!CL:0000234;7.80e-17;39!CL:0000576;5.48e-15;48!CL:0000766;2.16e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.15e-25,48;CL:0000234,1.15e-25,48;CL:0000860,1.81e-24,42;CL:0002057,1.81e-24,42;CL:0000766,2.19e-21,72;CL:0002009,2.28e-19,61;CL:0002194,1.34e-18,59;CL:0000576,1.34e-18,59;CL:0000040,1.34e-18,59;CL:0000559,1.34e-18,59;CL:0000557,8.51e-18,67;CL:0000839,2.12e-15,66;CL:0000763,6.73e-07,108;CL:0000049,6.73e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.90e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!6.16e-20!625;UBERON:0000480!9.85e-20!626;UBERON:0003081!1.53e-16!216;UBERON:0000468!1.89e-16!659;UBERON:0002193!2.38e-14!112;UBERON:0000926!9.14e-14!448;UBERON:0004120!9.14e-14!448;UBERON:0006603!9.14e-14!448;UBERON:0002390!2.04e-13!102;UBERON:0003061!2.04e-13!102;UBERON:0002371!3.37e-11!80;UBERON:0002050!3.49e-11!605;UBERON:0005423!3.49e-11!605;UBERON:0000923!4.25e-11!604;UBERON:0005291!4.25e-11!604;UBERON:0006598!4.25e-11!604;UBERON:0002532!4.25e-11!604;UBERON:0002405!1.15e-10!115;UBERON:0000062!1.34e-10!511;UBERON:0001474!4.42e-10!86;UBERON:0000922!4.98e-10!612;UBERON:0004765!2.58e-09!101;UBERON:0001434!2.58e-09!101;UBERON:0007023!5.49e-07!115;UBERON:0001009!6.57e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.83e-16,203;UBERON:0002193,1.43e-15,108;UBERON:0002390,1.48e-14,98;UBERON:0003061,1.48e-14,98;UBERON:0005423,1.75e-12,581;UBERON:0002371,1.77e-12,76;UBERON:0002405,3.00e-12,93;UBERON:0001474,3.06e-11,82;UBERON:0000926,7.58e-11,315;UBERON:0004120,7.58e-11,315;UBERON:0006603,7.58e-11,315;UBERON:0000922,9.35e-11,592;UBERON:0002050,1.26e-10,564;UBERON:0000923,5.79e-10,560;UBERON:0010316,5.79e-10,560;UBERON:0005291,5.79e-10,560;UBERON:0006598,5.79e-10,560;UBERON:0010317,5.79e-10,560;UBERON:0002532,5.79e-10,560;UBERON:0004765,2.38e-09,90;UBERON:0001434,6.35e-09,100;UBERON:0001009,5.02e-07,112;UBERON:0007023,7.03e-07,114 | |||
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| |||
|short_description=p6@CFLAR | |||
}} |
Revision as of 07:52, 21 January 2014
Short description: | p6@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CFLAR_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 33bp_to_ENST00000342795_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.15e-25 | 48 |
phagocyte | 1.15e-25 | 48 |
classical monocyte | 1.81e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-24 | 42 |
myeloid leukocyte | 2.19e-21 | 72 |
macrophage dendritic cell progenitor | 2.28e-19 | 61 |
monopoietic cell | 1.34e-18 | 59 |
monocyte | 1.34e-18 | 59 |
monoblast | 1.34e-18 | 59 |
promonocyte | 1.34e-18 | 59 |
granulocyte monocyte progenitor cell | 8.51e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.12e-15 | 66 |
myeloid cell | 6.73e-07 | 108 |
common myeloid progenitor | 6.73e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.83e-16 | 203 |
hemolymphoid system | 1.43e-15 | 108 |
hematopoietic system | 1.48e-14 | 98 |
blood island | 1.48e-14 | 98 |
developing anatomical structure | 1.75e-12 | 581 |
bone marrow | 1.77e-12 | 76 |
immune system | 3.00e-12 | 93 |
bone element | 3.06e-11 | 82 |
mesoderm | 7.58e-11 | 315 |
mesoderm-derived structure | 7.58e-11 | 315 |
presumptive mesoderm | 7.58e-11 | 315 |
embryo | 9.35e-11 | 592 |
embryonic structure | 1.26e-10 | 564 |
germ layer | 5.79e-10 | 560 |
germ layer / neural crest | 5.79e-10 | 560 |
embryonic tissue | 5.79e-10 | 560 |
presumptive structure | 5.79e-10 | 560 |
germ layer / neural crest derived structure | 5.79e-10 | 560 |
epiblast (generic) | 5.79e-10 | 560 |
skeletal element | 2.38e-09 | 90 |
skeletal system | 6.35e-09 | 100 |
circulatory system | 5.02e-07 | 112 |
adult organism | 7.03e-07 | 114 |