FFCP PHASE1:Hg19::chr2:37571815..37571841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9753 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000537448_5end | |||
|coexpression_cluster_id=C1903 | |||
|description=CAGE_peak_2_at_QPCT_5end | |||
|id=chr2:37571815..37571841,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.27e-15!42;CL:0000766!1.48e-14!76;CL:0002194!2.46e-14!63;CL:0000576!2.46e-14!63;CL:0000040!2.46e-14!63;CL:0000559!2.46e-14!63;CL:0002009!8.11e-14!65;CL:0000860!1.45e-12!45;CL:0000557!1.30e-10!71;CL:0000839!2.08e-10!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.93e-17;33!CL:0002057;4.93e-17;33!CL:0000473;3.14e-16;39!CL:0000234;3.14e-16;39!CL:0000576;1.46e-09;48!CL:0000766;1.45e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.82e-18,48;CL:0000234,4.82e-18,48;CL:0000766,6.25e-17,72;CL:0002194,6.32e-17,59;CL:0000576,6.32e-17,59;CL:0000040,6.32e-17,59;CL:0000559,6.32e-17,59;CL:0000860,4.89e-16,42;CL:0002057,4.89e-16,42;CL:0002009,5.32e-16,61;CL:0000839,1.78e-12,66;CL:0000557,2.44e-12,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.23e-18!625;UBERON:0000480!2.66e-18!626;UBERON:0000468!4.13e-18!659;UBERON:0000922!7.49e-14!612;UBERON:0002050!2.43e-13!605;UBERON:0005423!2.43e-13!605;UBERON:0000923!5.46e-13!604;UBERON:0005291!5.46e-13!604;UBERON:0006598!5.46e-13!604;UBERON:0002532!5.46e-13!604;UBERON:0000926!3.50e-11!448;UBERON:0004120!3.50e-11!448;UBERON:0006603!3.50e-11!448;UBERON:0003081!1.20e-10!216;UBERON:0002204!4.92e-10!167;UBERON:0002390!2.32e-09!102;UBERON:0003061!2.32e-09!102;UBERON:0001474!3.54e-09!86;UBERON:0000062!5.22e-09!511;UBERON:0002371!6.39e-09!80;UBERON:0004765!7.09e-09!101;UBERON:0001434!7.09e-09!101;UBERON:0002193!3.63e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.85e-11,98;UBERON:0003061,3.85e-11,98;UBERON:0000926,3.95e-11,315;UBERON:0004120,3.95e-11,315;UBERON:0006603,3.95e-11,315;UBERON:0001474,4.65e-11,82;UBERON:0002371,1.35e-10,76;UBERON:0003081,2.38e-10,203;UBERON:0002193,1.29e-09,108;UBERON:0000922,1.40e-09,592;UBERON:0001434,2.45e-09,100;UBERON:0004765,3.10e-09,90;UBERON:0002204,3.58e-09,167;UBERON:0005423,1.88e-08,581;UBERON:0002405,1.87e-07,93;UBERON:0002050,8.35e-07,564 | |||
|phase1_expression=1.99846217197612,2.35510576280081,1.55049844505568,4.00293193412522,3.12872766099101,3.48935409640147,7.59899634504932,3.15859936713415,1.56711376919903,1.96587149201207,1.39560233594486,2.62129646556207,3.16520373874144,1.23766352960047,0.662794751455832,6.05092631806598,1.80808358407193,2.19093027116212,2.92759679274304,0.61560529038394,1.42800483870977,0,2.0036519099174,1.09499540058307,2.25976751270645,0,0,0,3.93364276848904,1.91914699048606,13.9334510984468,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,12.7418943962332,7.62068900386538,7.59538047505481,1.79132379391939,1.29557466407592,1.54545340580512,9.16008904311258,9.06902264853143,7.27752183563449,12.3187389560013,7.40102198439286,9.29119112685311,8.91846416198666,10.5025889676931,8.0403958162119,11.721353145045,10.3277549373412,6.77132432971709,10.9180556934711,11.1891521523717,10.3372802844739,11.9372718024652,10.269728866435,5.11469700639233,9.23583640522805,9.17532825059507,6.39337125799041,15.381089647315,15.3194010666608,12.4564449799115,13.8186765891209,10.9511412868242,9.99068685643537,9.08099253950053,7.36555271975129,11.7091083353127,1.47878700418359,1.06302149982522,2.51590374610051,13.7040929998724,12.164328320162,14.9474795628285,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0,1.32171328579026,3.36305137788922,0.790152254325231,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,2.01210257911091,1.15076305659177,1.44575660953827,0,0.869079113764942,1.5905718941022,0.486634870302636,0.850813354476611,0.886917589850256,1.49319135678314,1.89919659471683,0.728590576585084,1.85392221392215,29.5338128225762,28.2090174424813,41.7487996029237,0.953962497221368,0,0.371457501329565,2.98143611050058,0.860234595106124,3.12426451446835,0.56530794192401,2.09749718104953,1.6507082516404,3.13492449805216,1.8089173141853,3.5576626268671,3.3472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,4.86085168729056,3.48268940307911,5.38870494302808,3.37834441449967,0,0,2.5648244150257,19.7670626154095,3.87780264148325,0,4.96971951695318,0.633152558322899,1.98613771219828,1.14734648299525,1.41867352879343,1.12135520028461,3.20246987189115,2.4666754841716,0.311211035399766,0.808264032418128,0.980771418680752,0.302714855289863,0,0.937285727335186,5.93104145977609,1.71141546463335,3.58676833324323,1.05691048779388,1.45685649931318,0.561803226808994,1.02077085627447,0.491337269247072,1.13658359293342,3.56400857184616,1.48360157567134,0.910161361938026,0,0.336672227908132,0,1.38532057742091,1.31693286264251,2.14541457059314,8.71380741658261,0.453728732640084,1.61450672119976,8.96941033037983,8.68920794754204,9.30282397861647,5.46178404963726,3.86460810068444,4.09457083929498,3.54430297706659,3.41029518064195,2.52433774244115,6.62759270224555,2.58633690910099,13.845374108148,6.04512589365842,1.18692414617341,6.95739071387869,4.90943017063502,1.72082757233402,0.731842236777572,0.795178609928912,2.09149097165133,1.7622379352613,1.00928340350251,0,6.25798129319264,7.07565032012174,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,1.18157981336281,0,1.10689594688802,1.54411029268673,1.09750285408626,1.1240175325762,1.91005047582099,3.14800713539001,0.977424915930974,0,1.44331342025273,2.43453850447661,8.21860859650752,0.721832238805369,0,0,0,0.858486162094873,9.84868024349589,28.548520346987,28.8344454840133,1.87467667973554,1.34385702559088,1.55952606966625,0.806026704325635,0.581267877027924,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,63.116906926416,38.580830981386,38.6817575793155,15.3965201420435,35.1670025045366,82.2939978492334,66.8833852355553,0.448524337381443,1.74384027533312,0.66004457238855,12.79789986002,0,0.845302752556,4.25500986535793,6.24044621468197,0,0,0.266422179016099,0.142977993658148,2.17048642156577,1.64648067356154,1.95441710576241,0,1.58390374586686,7.53598442648965,17.4306691720059,8.49770425047485,1.2162378064119,5.02257091432126,4.21667878966063,0.958499421966331,1.14861935834114,2.85273810081437,0.723906533337896,0.821905290201534,0.716243852959582,0,0.591092280605782,0,0.385029108839245,3.81141936333695,2.60279707715243,0.773288812777695,1.17261385734044,0.637938751653163,37.4503511973591,29.9161459204025,69.2073907438179,0.36807447515742,0.500170521059677,0,1.45579603071565,0.892144943985809,0.946214490203608,1.17141414992713,4.21324539618807,6.82222512167955,1.03473071292505,2.65690239414175,1.84369168541703,7.12445638638279,0,0,2.68798433959754,3.45142721309787,3.62873696531711,0.303127571446259,4.99306318531491,2.72151263996712,0.992431231275107,1.99500565274481,1.96462066103151,3.58789617915963,2.55853624533352,2.89537058058494,2.96836132889982,6.63101683351419,19.3542280591309,8.9518600055052,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| |||
|short_description=p2@QPCT | |||
}} |
Revision as of 02:36, 21 January 2014
Short description: | p2@QPCT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_QPCT_5end |
Coexpression cluster: | C1903_Neutrophils_Melanocyte_melanoma_large_Eosinophils_Dendritic_smallcell |
Association with transcript: | -10bp_to_ENST00000537448_5end |
EntrezGene: | QPCT |
HGNC: | 9753 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.82e-18 | 48 |
phagocyte | 4.82e-18 | 48 |
myeloid leukocyte | 6.25e-17 | 72 |
monopoietic cell | 6.32e-17 | 59 |
monocyte | 6.32e-17 | 59 |
monoblast | 6.32e-17 | 59 |
promonocyte | 6.32e-17 | 59 |
classical monocyte | 4.89e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-16 | 42 |
macrophage dendritic cell progenitor | 5.32e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.78e-12 | 66 |
granulocyte monocyte progenitor cell | 2.44e-12 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.85e-11 | 98 |
blood island | 3.85e-11 | 98 |
mesoderm | 3.95e-11 | 315 |
mesoderm-derived structure | 3.95e-11 | 315 |
presumptive mesoderm | 3.95e-11 | 315 |
bone element | 4.65e-11 | 82 |
bone marrow | 1.35e-10 | 76 |
lateral plate mesoderm | 2.38e-10 | 203 |
hemolymphoid system | 1.29e-09 | 108 |
embryo | 1.40e-09 | 592 |
skeletal system | 2.45e-09 | 100 |
skeletal element | 3.10e-09 | 90 |
musculoskeletal system | 3.58e-09 | 167 |
developing anatomical structure | 1.88e-08 | 581 |
immune system | 1.87e-07 | 93 |
embryonic structure | 8.35e-07 | 564 |