FFCP PHASE1:Hg19::chr3:149375747..149375758,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc003exf.2_5end | |||
|description=CAGE_peak_3_at_WWTR1_5end | |||
|id=chr3:149375747..149375758,- | |||
|ontology_enrichment_celltype=CL:0000055!5.88e-29!180;CL:0000222!4.25e-21!119;CL:0000220!3.71e-15!246;CL:0002321!9.90e-15!248;CL:0002139!1.66e-14!24;CL:0000115!1.02e-13!35;CL:0000680!9.26e-13!57;CL:0000056!9.26e-13!57;CL:0000355!9.26e-13!57;CL:0000183!1.37e-12!59;CL:0000359!1.50e-12!32;CL:0000071!3.42e-12!18;CL:0002546!3.42e-12!18;CL:0000187!4.91e-12!54;CL:0000393!5.93e-12!60;CL:0000211!5.93e-12!60;CL:0000192!3.63e-11!42;CL:0000514!3.63e-11!42;CL:0002078!4.61e-11!44;CL:0000057!5.32e-10!75;CL:0000213!1.21e-09!57;CL:0000215!1.21e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.26e-16;24!CL:0000115;1.03e-13;36!CL:0000071;1.31e-13;18!CL:0000359;1.77e-12;32!CL:0000192;8.03e-09;43!CL:0002078;2.85e-08;45!CL:1000413;2.27e-07;9!CL:0000213;3.84e-07;58!CL:0000215;3.84e-07;58!CL:0002539;4.67e-07;10!CL:0002494;9.89e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.92e-21,121;CL:0000115,1.92e-16,36;CL:0002139,3.73e-16,24;CL:0000071,1.52e-13,18;CL:0002546,1.52e-13,18;CL:0000359,4.15e-13,32;CL:0002078,6.95e-13,45;CL:0000680,2.48e-12,58;CL:0000056,2.48e-12,58;CL:0000355,2.48e-12,58;CL:0002321,5.38e-12,250;CL:0000187,1.56e-11,55;CL:0000393,3.44e-11,61;CL:0000211,3.44e-11,61;CL:0000192,4.84e-11,43;CL:0000514,4.84e-11,43;CL:0000213,7.75e-10,58;CL:0000215,7.75e-10,58;CL:0000057,2.52e-09,76;CL:1000413,2.43e-07,9;CL:0002539,4.45e-07,10;CL:0002494,5.96e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;1.31e-13;18!CL:0000514;8.03e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.77e-29!79;UBERON:0007798!4.77e-29!79;UBERON:0004872!1.07e-28!84;UBERON:0001981!8.30e-27!60;UBERON:0007500!8.30e-27!60;UBERON:0004537!8.30e-27!60;UBERON:0006965!8.30e-27!60;UBERON:0000055!8.83e-27!69;UBERON:0003914!1.56e-25!118;UBERON:0000477!1.47e-23!286;UBERON:0004111!7.04e-23!241;UBERON:0000119!1.27e-22!312;UBERON:0000483!3.05e-22!309;UBERON:0001637!1.87e-21!42;UBERON:0003509!1.87e-21!42;UBERON:0004572!1.87e-21!42;UBERON:0000025!3.24e-21!194;UBERON:0004535!1.01e-20!110;UBERON:0001009!3.63e-20!113;UBERON:0004573!2.58e-17!33;UBERON:0004571!2.58e-17!33;UBERON:0000475!5.35e-16!365;UBERON:0000467!1.22e-15!625;UBERON:0000480!2.41e-15!626;UBERON:0000468!2.57e-15!659;UBERON:0000490!3.24e-15!138;UBERON:0000481!4.01e-15!347;UBERON:0002385!9.62e-13!63;UBERON:0001015!9.62e-13!63;UBERON:0000383!9.62e-13!63;UBERON:0002100!1.30e-12!216;UBERON:0000922!2.35e-12!612;UBERON:0001134!2.96e-12!61;UBERON:0002036!2.96e-12!61;UBERON:0003082!2.96e-12!61;UBERON:0001986!3.42e-12!18;UBERON:0004638!3.42e-12!18;UBERON:0004852!3.42e-12!18;UBERON:0002050!3.84e-12!605;UBERON:0005423!3.84e-12!605;UBERON:0000923!5.06e-12!604;UBERON:0005291!5.06e-12!604;UBERON:0006598!5.06e-12!604;UBERON:0002532!5.06e-12!604;UBERON:0004290!5.31e-12!70;UBERON:0000487!1.13e-11!22;UBERON:0005256!1.37e-11!143;UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0000947!2.24e-11!21;UBERON:0010191!2.24e-11!21;UBERON:0006914!2.66e-10!25;UBERON:0000486!4.87e-10!82;UBERON:0003104!1.75e-09!238;UBERON:0009142!1.75e-09!238;UBERON:0000948!5.89e-08!24;UBERON:0005498!5.89e-08!24;UBERON:0004140!5.89e-08!24;UBERON:0009881!5.89e-08!24;UBERON:0004141!5.89e-08!24;UBERON:0003084!5.89e-08!24;UBERON:0007005!5.89e-08!24;UBERON:0004139!5.89e-08!24;UBERON:0004291!5.89e-08!24;UBERON:0003103!3.64e-07!69;UBERON:0007100!3.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.13e-17;33!UBERON:0004571;1.13e-17;33!UBERON:0001637;1.99e-17;42!UBERON:0003509;1.99e-17;42!UBERON:0004572;1.99e-17;42!UBERON:0007500;2.07e-15;56!UBERON:0001981;2.07e-15;56!UBERON:0004537;2.07e-15;56!UBERON:0000055;7.43e-14;65!UBERON:0004638;1.31e-13;18!UBERON:0001986;1.31e-13;18!UBERON:0004852;1.31e-13;18!UBERON:0000487;7.13e-13;22!UBERON:0003914;7.76e-13;74!UBERON:0002049;1.10e-12;75!UBERON:0007798;1.10e-12;75!UBERON:0000947;1.60e-12;21!UBERON:0010191;1.60e-12;21!UBERON:0006914;9.95e-11;25!UBERON:0000025;3.20e-08;93!UBERON:0004535;4.52e-08;109!UBERON:0000490;1.73e-07;33!UBERON:0003915;2.27e-07;9!UBERON:0004700;2.27e-07;9!UBERON:0001917;2.27e-07;9!UBERON:0000948;2.66e-07;22!UBERON:0004237;4.67e-07;10!UBERON:0004695;4.67e-07;10!UBERON:0002111;4.67e-07;10!UBERON:0004178;4.67e-07;10!UBERON:0001009;5.23e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.08e-31,78;UBERON:0007798,1.08e-31,78;UBERON:0004872,4.96e-31,83;UBERON:0007500,7.03e-30,59;UBERON:0001981,7.03e-30,59;UBERON:0004537,7.03e-30,59;UBERON:0006965,7.03e-30,59;UBERON:0000055,7.78e-30,68;UBERON:0003914,4.61e-26,117;UBERON:0004535,4.22e-25,109;UBERON:0001637,5.43e-24,42;UBERON:0003509,5.43e-24,42;UBERON:0004572,5.43e-24,42;UBERON:0001009,7.92e-24,112;UBERON:0004573,2.55e-19,33;UBERON:0004571,2.55e-19,33;UBERON:0000025,1.55e-17,192;UBERON:0004111,3.38e-17,240;UBERON:0000119,3.91e-16,309;UBERON:0000483,8.80e-16,306;UBERON:0007503,4.15e-14,78;UBERON:0000490,9.12e-14,148;UBERON:0004638,1.52e-13,18;UBERON:0001986,1.52e-13,18;UBERON:0004852,1.52e-13,18;UBERON:0000487,5.83e-13,22;UBERON:0000947,1.26e-12,21;UBERON:0010191,1.26e-12,21;UBERON:0002385,3.70e-12,64;UBERON:0001015,3.70e-12,64;UBERON:0000383,3.70e-12,64;UBERON:0002329,8.17e-12,71;UBERON:0003059,8.17e-12,71;UBERON:0007282,8.17e-12,71;UBERON:0004290,8.17e-12,71;UBERON:0009618,8.17e-12,71;UBERON:0001134,1.26e-11,62;UBERON:0002036,1.26e-11,62;UBERON:0003082,1.26e-11,62;UBERON:0007524,1.85e-11,73;UBERON:0003077,2.34e-11,72;UBERON:0007285,2.34e-11,72;UBERON:0006914,8.41e-11,25;UBERON:0005256,6.94e-10,122;UBERON:0002100,3.86e-09,199;UBERON:0000486,8.78e-09,83;UBERON:0003104,1.54e-08,160;UBERON:0009142,1.54e-08,160;UBERON:0000948,2.00e-08,24;UBERON:0005498,2.00e-08,24;UBERON:0004140,2.00e-08,24;UBERON:0009881,2.00e-08,24;UBERON:0004141,2.00e-08,24;UBERON:0003084,2.00e-08,24;UBERON:0007005,2.00e-08,24;UBERON:0004139,2.00e-08,24;UBERON:0004291,2.00e-08,24;UBERON:0000922,5.26e-08,592;UBERON:0000926,1.84e-07,315;UBERON:0004120,1.84e-07,315;UBERON:0006603,1.84e-07,315;UBERON:0003915,2.43e-07,9;UBERON:0004700,2.43e-07,9;UBERON:0001917,2.43e-07,9;UBERON:0000923,3.83e-07,560;UBERON:0010316,3.83e-07,560;UBERON:0005291,3.83e-07,560;UBERON:0006598,3.83e-07,560;UBERON:0010317,3.83e-07,560;UBERON:0002532,3.83e-07,560;UBERON:0004237,4.45e-07,10;UBERON:0004695,4.45e-07,10;UBERON:0002111,4.45e-07,10;UBERON:0004178,4.45e-07,10;UBERON:0007100,5.82e-07,27;UBERON:0005423,5.95e-07,581;UBERON:0002050,7.92e-07,564 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,3.00219895059391,1.78784437770915,0.872338524100369,0,3.15859936713415,2.61185628199839,2.21160542851358,2.09340350391728,0.655324116390517,0.527533956456907,0.990130823680373,2.65117900582333,4.70627602516243,7.23233433628772,5.11217063271161,6.34312638427659,2.33930010345897,3.26401105990805,3.76145665773705,3.43483184557268,3.96935832711364,2.88748071068046,0.152826811495903,0,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.66221330396589,1.0843174571537,7.01873074890245,4.34539556882471,27.0397221997374,13.6257763684738,1.70162670895322,2.88248216701333,2.3715392137144,1.5062593682237,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0,0,0,5.76410981363445,6.02164216574287,8.33137203858226,8.47961912886015,7.97048928798821,12.6554299292431,4.59788926380983,2.84258435086262,3.5576626268671,9.70689777017544,6.0424397566372,9.88353737434066,7.56592378399325,8.82391392830085,18.6332648012805,7.23327799101046,9.6547630229253,10.9233136068823,10.7321646226118,8.54339093611316,10.9921046358244,0,0,0.436094052142534,0.993943903390637,4.81195944325403,1.72131935057184,7.45775213946916,6.02936249737207,3.92474320099615,7.47242970107935,2.96001058100592,2.17847724779836,6.7355336034844,7.5192475432191,6.50836938873205,13.25204626304,1.87457145467037,4.99456122928513,1.71141546463335,3.43731965269142,2.23125547423153,1.78060238804945,1.68540968042698,1.63323337003915,3.80786383666481,2.89312187292143,3.56400857184616,3.21447008062124,0.910161361938026,0,2.18836948140286,2.37725187756732,3.3247693858102,2.19488810440419,0.612975591598039,4.20666564938471,3.51639767796065,1.4351170855109,0.85422955527427,1.27159140695737,1.80054657650641,1.75189299705346,2.57640540045629,0.558350568994769,1.5189869901714,1.07180705677318,2.01947019395292,0.368199594569197,1.77810662500693,2.84007674013291,1.81353776809752,1.01736355386293,0.57978255948989,0.545492241181669,0.860413786167011,0.243947412259191,0.132529768321485,0.929551542956147,1.0366105501537,1.26160425437814,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0.709840800239063,0.505754070234305,0.964044119533928,0.55146986366197,1.52515610864684,0.237270619111097,0.674156540800822,0.784885860501384,0.38474715694639,2.21446636387394,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.614942192715568,1.20097467208968,0.878002283269004,0,0.904760751704678,0.555530670951178,1.95484983186195,9.35941306751621,1.44331342025273,1.15930404975077,2.7003999674239,4.33099343283221,4.62985512576611,4.75635380586496,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.895585227028483,0.581267877027924,3.4504441124869,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.63497894292169,4.20187268114105,0,0,1.33675740514321,1.8020583470635,5.14487578735041,2.01835951821649,1.74384027533312,1.39342743059805,3.61960804121778,3.57656445851882,1.690605505112,2.12750493267896,1.04007436911366,1.54324424557285,2.83698264046557,2.66422179016099,0.285955987316295,0.542621605391443,0,2.60588947434988,0.355391948742546,0,0.602878754119172,0.871533458600294,1.79951384127703,0,0,0,3.35474797688216,1.14861935834114,5.70547620162874,2.02693829334611,5.54786070886035,2.32779252211864,0,0,0,0,10.9260688415659,10.4111883086097,3.86644406388848,1.67516265334349,3.18969375826582,0,0,0,0.736148950314839,1.00034104211935,1.35632511849868,1.45579603071565,0.356857977594324,0.473107245101804,1.63997980989798,2.40756879782175,4.5481500811197,2.0694614258501,5.31380478828349,2.58116835958384,1.04260337361699,0.587403472388222,3.0882908142977,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0.992431231275107,0.920771839728375,1.12264037773229,0.256278298511402,3.07024349440022,1.76939313257968,1.48418066444991,6.01417805830357,4.97172830876756,4.10635780069046,5.19254429183621,2.78904908303902,0.120859449591622,0.802025881213139,0.0920809889358963,2.98517565227978,2.54927635209404,0.917870904715969,1.80479845162965,1.15523005656622,1.56869953835371,2.92278449306521,1.58327443339314,9.09867072567173,3.57196781080683,6.90930931526846,6.16909010761157,2.16757150035082,2.00675909541941,0.254876273045038,0,1.56712328305525,0,0,0.512900250232778,0.984043937099117,0.325378394664303,1.44257416306811,1.64825036673018,1.07262349896764,1.72279661398852,0,1.6068392984416,3.77015801339276,0.770243085573222,1.22802939780904,1.92971201478343,0.751941714077915,1.16013355131383,1.96021243057032,8.45804338644005,0,0.576570202095319,0.510450849978337,0.2023155617111,5.57814659156743,5.98143458978216,9.0614845120878,4.62050370264133,3.72614221221915,12.179061889051,7.22764454505288,10.8774913923913,0.372158369359667,2.21465597303108,0.38126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| |||
|short_description=p3@WWTR1 | |||
}} |
Revision as of 21:56, 21 January 2014
Short description: | p3@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_uc003exf.2_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.92e-21 | 121 |
endothelial cell | 1.92e-16 | 36 |
endothelial cell of vascular tree | 3.73e-16 | 24 |
blood vessel endothelial cell | 1.52e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-13 | 18 |
vascular associated smooth muscle cell | 4.15e-13 | 32 |
meso-epithelial cell | 6.95e-13 | 45 |
muscle precursor cell | 2.48e-12 | 58 |
myoblast | 2.48e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.48e-12 | 58 |
embryonic cell | 5.38e-12 | 250 |
muscle cell | 1.56e-11 | 55 |
electrically responsive cell | 3.44e-11 | 61 |
electrically active cell | 3.44e-11 | 61 |
smooth muscle cell | 4.84e-11 | 43 |
smooth muscle myoblast | 4.84e-11 | 43 |
lining cell | 7.75e-10 | 58 |
barrier cell | 7.75e-10 | 58 |
fibroblast | 2.52e-09 | 76 |
endothelial cell of artery | 2.43e-07 | 9 |
aortic smooth muscle cell | 4.45e-07 | 10 |
cardiocyte | 5.96e-07 | 16 |