FFCP PHASE1:Hg19::chr4:103747011..103747024,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000350435_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_20_at_UBE2D3_5end | |||
|id=chr4:103747011..103747024,- | |||
|ontology_enrichment_celltype=CL:0000766!4.72e-31!76;CL:0000738!1.29e-30!140;CL:0002057!8.38e-28!42;CL:0000839!9.62e-27!70;CL:0002009!2.11e-26!65;CL:0000557!6.99e-26!71;CL:0000037!2.89e-25!172;CL:0000566!2.89e-25!172;CL:0002194!3.46e-25!63;CL:0000576!3.46e-25!63;CL:0000040!3.46e-25!63;CL:0000559!3.46e-25!63;CL:0000763!7.16e-25!112;CL:0000049!7.16e-25!112;CL:0002031!2.31e-24!124;CL:0000988!2.91e-24!182;CL:0000860!4.09e-24!45;CL:0002032!7.10e-24!165;CL:0000837!7.10e-24!165;CL:0000134!6.91e-23!358;CL:0002087!2.62e-22!119;CL:0002320!6.15e-22!365;CL:0000048!5.74e-20!430;CL:0000723!1.26e-18!436;CL:0000034!9.49e-18!444;CL:0000219!4.63e-17!390;CL:0002371!1.23e-09!591;CL:0000003!1.86e-08!722;CL:0000144!7.90e-08!625;CL:0000094!4.27e-07!8;CL:0000063!9.88e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.98e-42;33!CL:0002057;4.98e-42;33!CL:0000576;5.25e-33;48!CL:0000473;2.16e-32;39!CL:0000234;2.16e-32;39!CL:0000766;1.67e-26;69!CL:0000094;3.54e-13;8!CL:0000738;3.63e-11;136!CL:0000763;1.09e-10;100!CL:0000990;1.60e-09;8!CL:0000081;5.11e-09;11!CL:0002087;5.59e-09;104!CL:0002393;2.57e-08;6!CL:0002397;2.57e-08;6!CL:0000453;5.57e-08;5!CL:0000451;1.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.72e-61,72;CL:0000860,1.76e-57,42;CL:0002057,1.76e-57,42;CL:0000473,2.75e-53,48;CL:0000234,2.75e-53,48;CL:0002009,1.57e-52,61;CL:0000839,1.37e-51,66;CL:0000557,1.39e-50,67;CL:0002194,6.17e-50,59;CL:0000576,6.17e-50,59;CL:0000040,6.17e-50,59;CL:0000559,6.17e-50,59;CL:0000763,1.69e-45,108;CL:0000049,1.69e-45,108;CL:0000738,1.89e-41,136;CL:0000037,1.59e-31,168;CL:0000988,8.26e-31,177;CL:0002031,8.63e-31,120;CL:0002032,1.44e-30,161;CL:0000837,1.44e-30,161;CL:0002087,1.72e-28,115;CL:0000134,1.19e-19,354;CL:0002320,1.03e-18,361;CL:0000048,2.38e-16,427;CL:0000723,1.05e-15,433;CL:0000219,1.94e-15,386;CL:0000034,2.07e-15,441;CL:0000094,2.60e-13,8;CL:0002393,4.79e-12,9;CL:0002397,4.79e-12,9;CL:0000990,8.60e-10,8;CL:0000081,4.13e-09,11;CL:0000453,4.26e-08,5;CL:0000451,1.09e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.58e-41;42!CL:0000049;1.40e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.42e-30!102;UBERON:0003061!1.42e-30!102;UBERON:0002193!1.24e-27!112;UBERON:0002371!4.51e-21!80;UBERON:0002384!9.88e-21!375;UBERON:0001474!1.23e-18!86;UBERON:0004765!6.09e-16!101;UBERON:0001434!6.09e-16!101;UBERON:0003081!5.86e-13!216;UBERON:0002405!1.16e-12!115;UBERON:0002204!8.73e-12!167;UBERON:0000178!3.34e-10!15;UBERON:0000179!3.34e-10!15;UBERON:0000463!3.34e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.23e-18;15!UBERON:0000179;7.23e-18;15!UBERON:0000463;7.23e-18;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-53,98;UBERON:0003061,1.52e-53,98;UBERON:0002193,2.93e-48,108;UBERON:0002371,1.66e-42,76;UBERON:0001474,4.09e-38,82;UBERON:0004765,1.23e-34,90;UBERON:0002405,4.72e-33,93;UBERON:0001434,8.11e-31,100;UBERON:0003081,1.76e-24,203;UBERON:0002204,4.73e-20,167;UBERON:0000178,4.16e-18,15;UBERON:0000179,4.16e-18,15;UBERON:0000463,4.16e-18,15;UBERON:0002384,1.94e-17,371;UBERON:0000926,1.06e-12,315;UBERON:0004120,1.06e-12,315;UBERON:0006603,1.06e-12,315 | |||
|phase1_expression=4.54195948176392,1.07050261945492,1.9733616573436,5.00366491765652,0.446961094427288,2.61701557230111,0,0,0,0.491467873003018,0,0.218441372130172,0,0.247532705920093,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,9.04737836752479,3.0706351847777,1.70297735647684,0.919421224478927,0,0,0,0.142169232487422,0.293600439334847,1.10799081706375,1.80490002723128,2.17010870715852,1.56740831967947,0.971680998056939,0.77272670290256,4.50734540216651,5.66813915533214,2.42584061187816,6.0431549595478,2.46700732813095,3.40677007984614,4.89077066947656,5.63553554364021,6.14853797710322,3.10271112662957,3.87290810150296,4.06279459783025,5.08254316765033,4.36649840092553,5.8428105955722,4.59125838556354,7.06043859567406,5.11469700639233,4.94776950280074,3.59034583718937,4.68847225585964,4.93355705668593,4.53908179752912,6.22822248995575,4.77372463987812,2.60741459210101,3.9093992046921,4.23779651843358,1.84138817993782,5.06339819905415,3.38008458099107,3.61427309940574,2.93522103711726,3.14520167210186,3.60424542819615,2.73233497385036,2.28010194992999,3.38158351238453,3.28795476776341,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0.983548850569165,1.57204305099666,0.616804496998528,0.334372990781356,0.32592226663359,0,0,1.00269411196656,0.883817722424512,1.10766947291811,0.541607727530031,0.384273959177026,1.1705341280389,0.657751618414705,1.38175008892924,1.15921234294021,0.444859689486181,0.267540828089713,3.1360657141493,1.0197840842781,0.766440987203842,1.37450978193052,1.51811815211702,0.95569624297229,1.30216690771284,0.950452044448374,1.6563263098555,1.27986611154418,1.24930726552346,0.710331756132051,0.821127996921047,0.80642697289893,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,2.3858578411533,0.973269740605272,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,1.29818957461873,2.26368658489047,1.99436940778298,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0.71153252537342,0.33472061276467,0,1.52054421143703,0,0.367663080345869,0,0,0,0,1.53316637465883,0,0,19.7670626154095,31.022421131866,0,0.496971951695318,0.759783069987479,0.264818361626438,0.286836620748814,0,1.68203280042692,0,0.49333509683432,0,0.404132016209064,0.653847612453835,0,0,0,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0,0,0,0.877955241761676,0,0.300476117813194,0.453728732640084,0.538168907066586,1.49490172172997,0.847727604638247,0.300091096084402,1.13357782162283,0.515281080091258,1.67505170698431,0.168776332241266,0.779496041289589,0.252433774244115,1.38074847963449,1.13152239773168,0,1.20902517873168,0.169560592310488,1.15956511897978,1.09098448236334,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,1.85747171212792,1.44375896333917,0.118306800039844,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,1.23108503043699,2.10603838625314,0.445893486866185,0,1.34385702559088,0.567100388969546,0.806026704325635,0,0,17.735876564254,1.05658120815871,0.414656231081544,0.432359860250884,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.336393253036082,0,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,1.15825045334063,0.410952645100767,0.358121926479791,0.336255431980582,0.985153801009636,0,0.641715181398742,0,0,0,0,0,35.2033301255176,38.8909896965232,44.7568754510918,0.12269149171914,0,0.542530047399471,0.207970861530807,0.713715955188647,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.695068915744663,0,0,1.24060815673732,1.50999940573032,1.38745825144478,0.303127571446259,0,0,3.47350930946288,0.767309866440312,0.841980283299221,2.43464383585832,1.02341449813341,1.12597744800525,2.96836132889982,0.616838775210622,0.177561725313127,0.492762936082855,1.03850885836724,1.39452454151951,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,4.38519753291869,2.0914836081992,0,0,0,0.618246069886334,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,0.960950336825531,0.765676274967505,0.10115778085555,1.39453664789186,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0,0.715624433709956,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0,0.202182481573316,0,0,0,1.70599442741899,1.05650146756755,0.136499911407986,0,1.13008116620243,0,1.32687795048244,1.31535265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| |||
|short_description=p20@UBE2D3 | |||
}} |
Revision as of 02:32, 22 January 2014
Short description: | p20@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_UBE2D3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000350435_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-53 | 98 |
blood island | 1.52e-53 | 98 |
hemolymphoid system | 2.93e-48 | 108 |
bone marrow | 1.66e-42 | 76 |
bone element | 4.09e-38 | 82 |
skeletal element | 1.23e-34 | 90 |
immune system | 4.72e-33 | 93 |
skeletal system | 8.11e-31 | 100 |
lateral plate mesoderm | 1.76e-24 | 203 |
musculoskeletal system | 4.73e-20 | 167 |
blood | 4.16e-18 | 15 |
haemolymphatic fluid | 4.16e-18 | 15 |
organism substance | 4.16e-18 | 15 |
connective tissue | 1.94e-17 | 371 |
mesoderm | 1.06e-12 | 315 |
mesoderm-derived structure | 1.06e-12 | 315 |
presumptive mesoderm | 1.06e-12 | 315 |