FFCP PHASE1:Mm9::chr16:48872791..48872801,+: Difference between revisions
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{{FFCP|EntrezGene=245195|HGNC=|MCL_coexpression_id=3|UniProt=Q8K426|association_with_transcript=70bp_to_ENSMUST00000065666,NM_181596,uc007zjw.2_5end|description=CAGE_peak_4_at_Retnlg_5end|id=chr16:48872791..48872801,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.92e-10,9|ontology_enrichment_disease=DOID:0060100!9.67e-10!3;DOID:4045!9.67e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,7.14e-30,3;DOID:4045,7.14e-30,3;DOID:0050686,2.51e-15,6|ontology_enrichment_uberon=UBERON:0000981!8.51e-12!4;UBERON:0002495!8.51e-12!4;UBERON:0003608!8.51e-12!4;UBERON:0003826!8.51e-12!4;UBERON:0008202!8.51e-12!4;UBERON:0004375!8.51e-12!4;UBERON:0002428!8.51e-12!4;UBERON:0003464!8.51e-12!4;UBERON:0003606!8.51e-12!4;UBERON:0009749!8.51e-12!4;UBERON:0003860!8.51e-12!4;UBERON:0005856!8.51e-12!4;UBERON:0005866!8.51e-12!4;UBERON:0007828!8.51e-12!4;UBERON:0005254!8.51e-12!4;UBERON:0001271!8.51e-12!4;UBERON:0002091!8.51e-12!4;UBERON:0001464!8.51e-12!4;UBERON:0003285!8.51e-12!4;UBERON:0010129!8.51e-12!4;UBERON:0006234!8.51e-12!4;UBERON:0005418!1.95e-09!5;UBERON:0002472!1.95e-09!5;UBERON:0008784!1.95e-09!5;UBERON:0006058!1.95e-09!5;UBERON:0007823!1.95e-09!5;UBERON:0004709!1.95e-09!5;UBERON:0005420!1.95e-09!5;UBERON:0006057!1.95e-09!5;UBERON:0000978!1.95e-09!5;UBERON:0002103!1.95e-09!5;UBERON:0000376!1.95e-09!5;UBERON:0000154!1.95e-09!5;UBERON:0005730!1.95e-09!5;UBERON:0000075!7.40e-08!6;UBERON:0002529!7.40e-08!6;UBERON:0000914!1.48e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.92e-10,9;UBERON:0002036,1.92e-10,9;UBERON:0002385,1.92e-10,9;UBERON:0000486,1.92e-10,9;UBERON:0007503,1.92e-10,9;UBERON:0001015,1.92e-10,9;UBERON:0002329,1.92e-10,9;UBERON:0003082,1.92e-10,9;UBERON:0003059,1.92e-10,9;UBERON:0007282,1.92e-10,9;UBERON:0004290,1.92e-10,9;UBERON:0009618,1.92e-10,9;UBERON:0000981,2.20e-10,4;UBERON:0003608,2.20e-10,4;UBERON:0003826,2.20e-10,4;UBERON:0008202,2.20e-10,4;UBERON:0004381,2.20e-10,4;UBERON:0007273,2.20e-10,4;UBERON:0010912,2.20e-10,4;UBERON:0002513,2.20e-10,4;UBERON:0004375,2.20e-10,4;UBERON:0010740,2.20e-10,4;UBERON:0010363,2.20e-10,4;UBERON:0003860,2.20e-10,4;UBERON:0002428,2.20e-10,4;UBERON:0010742,2.20e-10,4;UBERON:0002495,2.20e-10,4;UBERON:0003464,2.20e-10,4;UBERON:0003606,2.20e-10,4;UBERON:0005893,2.20e-10,4;UBERON:0009749,2.20e-10,4;UBERON:0010712,2.20e-10,4;UBERON:0010886,2.20e-10,4;UBERON:0005254,2.20e-10,4;UBERON:0010885,2.20e-10,4;UBERON:0010881,2.20e-10,4;UBERON:0010882,2.20e-10,4;UBERON:0007844,2.20e-10,4;UBERON:0001441,2.20e-10,4;UBERON:0011249,2.20e-10,4;UBERON:0002091,2.20e-10,4;UBERON:0003285,2.20e-10,4;UBERON:0004288,2.20e-10,4;UBERON:0010129,2.20e-10,4;UBERON:0006234,2.20e-10,4;UBERON:0000383,1.85e-09,10;UBERON:0007524,1.18e-08,11;UBERON:0003077,1.18e-08,11;UBERON:0007285,1.18e-08,11;UBERON:0005418,1.71e-08,5;UBERON:0002472,1.71e-08,5;UBERON:0008784,1.71e-08,5;UBERON:0006058,1.71e-08,5;UBERON:0004709,1.71e-08,5;UBERON:0002529,1.71e-08,5;UBERON:0010538,1.71e-08,5;UBERON:0005420,1.71e-08,5;UBERON:0010758,1.71e-08,5;UBERON:0000978,1.71e-08,5;UBERON:0002103,1.71e-08,5;UBERON:0000376,1.71e-08,5;UBERON:0000154,1.71e-08,5;UBERON:0010709,1.71e-08,5;UBERON:0005730,1.71e-08,5;UBERON:0002204,1.11e-07,32;UBERON:0000075,3.16e-07,6;UBERON:0005856,3.16e-07,6;UBERON:0005866,3.16e-07,6;UBERON:0005863,3.16e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.0993383309626,67.9761749735706,42.9289470058515,94.7052695729933,137.292142476648,100.98615343048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.323533699894818,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,1.48155621895769,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0.463735671240843|short_description=p4@Retnlg}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:245195 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K426 | |||
|association_with_transcript=70bp_to_ENSMUST00000065666,NM_181596,uc007zjw.2_5end | |||
|cluster_id=chr16:48872791..48872801,+ | |||
|description=CAGE_peak_4_at_Retnlg_5end | |||
|id=chr16:48872791..48872801,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.92e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!9.67e-10!3;DOID:4045!9.67e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.14e-30,3;DOID:4045,7.14e-30,3;DOID:0050686,2.51e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0000981!8.51e-12!4;UBERON:0002495!8.51e-12!4;UBERON:0003608!8.51e-12!4;UBERON:0003826!8.51e-12!4;UBERON:0008202!8.51e-12!4;UBERON:0004375!8.51e-12!4;UBERON:0002428!8.51e-12!4;UBERON:0003464!8.51e-12!4;UBERON:0003606!8.51e-12!4;UBERON:0009749!8.51e-12!4;UBERON:0003860!8.51e-12!4;UBERON:0005856!8.51e-12!4;UBERON:0005866!8.51e-12!4;UBERON:0007828!8.51e-12!4;UBERON:0005254!8.51e-12!4;UBERON:0001271!8.51e-12!4;UBERON:0002091!8.51e-12!4;UBERON:0001464!8.51e-12!4;UBERON:0003285!8.51e-12!4;UBERON:0010129!8.51e-12!4;UBERON:0006234!8.51e-12!4;UBERON:0005418!1.95e-09!5;UBERON:0002472!1.95e-09!5;UBERON:0008784!1.95e-09!5;UBERON:0006058!1.95e-09!5;UBERON:0007823!1.95e-09!5;UBERON:0004709!1.95e-09!5;UBERON:0005420!1.95e-09!5;UBERON:0006057!1.95e-09!5;UBERON:0000978!1.95e-09!5;UBERON:0002103!1.95e-09!5;UBERON:0000376!1.95e-09!5;UBERON:0000154!1.95e-09!5;UBERON:0005730!1.95e-09!5;UBERON:0000075!7.40e-08!6;UBERON:0002529!7.40e-08!6;UBERON:0000914!1.48e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.92e-10,9;UBERON:0002036,1.92e-10,9;UBERON:0002385,1.92e-10,9;UBERON:0000486,1.92e-10,9;UBERON:0007503,1.92e-10,9;UBERON:0001015,1.92e-10,9;UBERON:0002329,1.92e-10,9;UBERON:0003082,1.92e-10,9;UBERON:0003059,1.92e-10,9;UBERON:0007282,1.92e-10,9;UBERON:0004290,1.92e-10,9;UBERON:0009618,1.92e-10,9;UBERON:0000981,2.20e-10,4;UBERON:0003608,2.20e-10,4;UBERON:0003826,2.20e-10,4;UBERON:0008202,2.20e-10,4;UBERON:0004381,2.20e-10,4;UBERON:0007273,2.20e-10,4;UBERON:0010912,2.20e-10,4;UBERON:0002513,2.20e-10,4;UBERON:0004375,2.20e-10,4;UBERON:0010740,2.20e-10,4;UBERON:0010363,2.20e-10,4;UBERON:0003860,2.20e-10,4;UBERON:0002428,2.20e-10,4;UBERON:0010742,2.20e-10,4;UBERON:0002495,2.20e-10,4;UBERON:0003464,2.20e-10,4;UBERON:0003606,2.20e-10,4;UBERON:0005893,2.20e-10,4;UBERON:0009749,2.20e-10,4;UBERON:0010712,2.20e-10,4;UBERON:0010886,2.20e-10,4;UBERON:0005254,2.20e-10,4;UBERON:0010885,2.20e-10,4;UBERON:0010881,2.20e-10,4;UBERON:0010882,2.20e-10,4;UBERON:0007844,2.20e-10,4;UBERON:0001441,2.20e-10,4;UBERON:0011249,2.20e-10,4;UBERON:0002091,2.20e-10,4;UBERON:0003285,2.20e-10,4;UBERON:0004288,2.20e-10,4;UBERON:0010129,2.20e-10,4;UBERON:0006234,2.20e-10,4;UBERON:0000383,1.85e-09,10;UBERON:0007524,1.18e-08,11;UBERON:0003077,1.18e-08,11;UBERON:0007285,1.18e-08,11;UBERON:0005418,1.71e-08,5;UBERON:0002472,1.71e-08,5;UBERON:0008784,1.71e-08,5;UBERON:0006058,1.71e-08,5;UBERON:0004709,1.71e-08,5;UBERON:0002529,1.71e-08,5;UBERON:0010538,1.71e-08,5;UBERON:0005420,1.71e-08,5;UBERON:0010758,1.71e-08,5;UBERON:0000978,1.71e-08,5;UBERON:0002103,1.71e-08,5;UBERON:0000376,1.71e-08,5;UBERON:0000154,1.71e-08,5;UBERON:0010709,1.71e-08,5;UBERON:0005730,1.71e-08,5;UBERON:0002204,1.11e-07,32;UBERON:0000075,3.16e-07,6;UBERON:0005856,3.16e-07,6;UBERON:0005866,3.16e-07,6;UBERON:0005863,3.16e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.0993383309626,67.9761749735706,42.9289470058515,94.7052695729933,137.292142476648,100.98615343048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.323533699894818,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,1.48155621895769,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0.463735671240843 | |||
|short_description=p4@Retnlg | |||
}} |
Revision as of 21:57, 3 August 2015
Short description: | p4@Retnlg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Retnlg_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 70bp_to_ENSMUST00000065666, NM_181596, uc007zjw.2_5end |
EntrezGene: | 245195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.92e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.14e-30 | 3 |
muscle cancer | 7.14e-30 | 3 |
organ system cancer | 2.51e-15 | 6 |