FFCP PHASE1:Mm9::chr17:34324647..34324694,+: Difference between revisions
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{{FFCP|EntrezGene=21354|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=0bp_to_ENSMUST00000166287,ENSMUST00000166853_5end|description=CAGE_peak_2_at_Tap1_5end|id=chr17:34324647..34324694,+|ontology_enrichment_celltype=CL:0002320!9.69e-15!46;CL:0000134!9.69e-15!46;CL:0000219!2.44e-14!54;CL:0000063!2.56e-13!66;CL:0000988!3.36e-12!32;CL:0002032!3.36e-12!32;CL:0000037!3.36e-12!32;CL:0000566!3.36e-12!32;CL:0000837!3.36e-12!32;CL:0002031!7.35e-11!25;CL:0000738!1.64e-08!17;CL:0002087!1.64e-08!17;CL:0000838!2.37e-08!12;CL:0000084!1.04e-07!11;CL:0000827!1.04e-07!11;CL:0000542!2.91e-07!13;CL:0000051!2.91e-07!13|ontology_enrichment_celltype_v019_2=CL:0002320,3.06e-15,46;CL:0000134,3.06e-15,46;CL:0000219,8.07e-15,54;CL:0000988,1.26e-12,32;CL:0002032,1.26e-12,32;CL:0000037,1.26e-12,32;CL:0000837,1.26e-12,32;CL:0002031,2.05e-11,25;CL:0000838,1.44e-08,12;CL:0000738,1.48e-08,17;CL:0002087,1.48e-08,17;CL:0000084,6.61e-08,11;CL:0000827,6.61e-08,11;CL:0000542,2.89e-07,13;CL:0000051,2.89e-07,13;CL:0000791,8.34e-07,9;CL:0000789,8.34e-07,9;CL:0002420,8.34e-07,9;CL:0002419,8.34e-07,9;CL:0000790,8.34e-07,9;CL:0000049,9.83e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.37e-20!70;UBERON:0002193!3.07e-19!48;UBERON:0002390!6.23e-18!45;UBERON:0003061!6.23e-18!45;UBERON:0002384!9.69e-15!46;UBERON:0000490!1.22e-12!66;UBERON:0005057!8.56e-12!51;UBERON:0004119!2.90e-11!130;UBERON:0000925!2.90e-11!130;UBERON:0006595!2.90e-11!130;UBERON:0001007!4.63e-11!128;UBERON:0001555!4.63e-11!128;UBERON:0007026!4.63e-11!128;UBERON:0003929!5.61e-11!55;UBERON:0004177!9.71e-11!29;UBERON:0004921!1.68e-10!126;UBERON:0004185!1.68e-10!126;UBERON:0005911!5.97e-10!69;UBERON:0003408!3.13e-09!24;UBERON:0003081!3.70e-09!88;UBERON:0002204!5.66e-09!32;UBERON:0002370!6.36e-09!23;UBERON:0000974!6.36e-09!23;UBERON:0004807!6.36e-09!23;UBERON:0005058!6.36e-09!23;UBERON:0003351!6.36e-09!23;UBERON:0009113!6.36e-09!23;UBERON:0003295!6.36e-09!23;UBERON:0009722!6.36e-09!23;UBERON:0005562!6.36e-09!23;UBERON:0007690!6.36e-09!23;UBERON:0006562!9.51e-09!24;UBERON:0001557!9.51e-09!24;UBERON:0001042!9.51e-09!24;UBERON:0008814!9.51e-09!24;UBERON:0009145!9.51e-09!24;UBERON:0002371!4.47e-08!16;UBERON:0000072!9.57e-08!27;UBERON:0003104!1.77e-07!131;UBERON:0009142!1.77e-07!131;UBERON:0000077!2.32e-07!97;UBERON:0001474!3.21e-07!22;UBERON:0004765!3.21e-07!22;UBERON:0001434!3.21e-07!22;UBERON:0002530!6.53e-07!65;UBERON:0001041!6.91e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.46e-20,48;UBERON:0002405,2.46e-20,48;UBERON:0002390,5.56e-19,45;UBERON:0003061,5.56e-19,45;UBERON:0002384,3.06e-15,46;UBERON:0004119,2.17e-13,118;UBERON:0000925,2.17e-13,118;UBERON:0006595,2.17e-13,118;UBERON:0001007,3.50e-13,116;UBERON:0001555,3.50e-13,116;UBERON:0007026,3.50e-13,116;UBERON:0000490,3.77e-13,66;UBERON:0004921,1.45e-12,114;UBERON:0004177,1.62e-11,29;UBERON:0005057,1.62e-11,29;UBERON:0003929,1.96e-11,55;UBERON:0000077,2.26e-11,35;UBERON:0005911,1.78e-10,69;UBERON:0003408,5.79e-10,24;UBERON:0002370,1.21e-09,23;UBERON:0000974,1.21e-09,23;UBERON:0004807,1.21e-09,23;UBERON:0005058,1.21e-09,23;UBERON:0003351,1.21e-09,23;UBERON:0009113,1.21e-09,23;UBERON:0003295,1.21e-09,23;UBERON:0009722,1.21e-09,23;UBERON:0005562,1.21e-09,23;UBERON:0007690,1.21e-09,23;UBERON:0006562,1.89e-09,24;UBERON:0001557,1.89e-09,24;UBERON:0001042,1.89e-09,24;UBERON:0008814,1.89e-09,24;UBERON:0009145,1.89e-09,24;UBERON:0002204,3.29e-09,32;UBERON:0003081,4.38e-09,87;UBERON:0001041,8.29e-09,80;UBERON:0000072,2.33e-08,27;UBERON:0002371,2.77e-08,16;UBERON:0001474,2.12e-07,22;UBERON:0004765,2.12e-07,22;UBERON:0001434,2.12e-07,22;UBERON:0001004,3.52e-07,42;UBERON:0002530,3.54e-07,65;UBERON:0000065,6.89e-07,41;UBERON:0000926,9.36e-07,120;UBERON:0004120,9.36e-07,120;UBERON:0006603,9.36e-07,120|phase1_expression=1.60148847104794,8.72438519098403,6.3699893514535,7.25914107136392,9.01612313903425,2.35030980676646,3.03696432774183,83.5427902666998,16.3314917695933,29.4921303165712,10.7867319982068,11.2478744183424,72.0755073010376,81.0387130424106,18.9872564234928,15.9955461237963,12.5921138063066,70.6635250402452,64.7180126619087,59.8389409035223,3.23164502574065,16.0851340945434,25.8587791247546,7.51964387129011,8.02932483735095,6.31655160526522,5.1691439539089,7.11055067863434,5.51067916423484,9.07308467135751,8.86922042621219,4.44521471421742,1.23012957516914,0,5.48818077527422,2.49351968037739,3.47087905646027,19.2524550138978,10.9386948233332,12.5645698553712,17.6469446409304,25.9557284284209,18.4493934151838,8.43508680436368,7.09638518536602,5.87349606917381,18.7773922643529,1.09012578190223,3.07560655828261,4.47188767870852,5.03951117851305,2.87505128729943,52.5159556960715,55.1275227928622,54.1111016619367,2.05807548828758,4.29800159908135,4.12537673821954,0.202316460859598,0.528990979272033,0,12.5372476865579,16.0073063300005,9.44894703145469,15.8218618010716,14.209602298922,8.68840320503374,9.22123932771731,0,0.270011876663381,0,0.5713019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1.73615949883027,0.499621155875892,3.97683734357194,3.86767897286937,1.3390183244819,3.75005412503176,3.2461496986859|short_description=p2@Tap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21354 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000166287,ENSMUST00000166853_5end | |||
|cluster_id=chr17:34324647..34324694,+ | |||
|description=CAGE_peak_2_at_Tap1_5end | |||
|id=chr17:34324647..34324694,+ | |||
|ontology_enrichment_celltype=CL:0002320!9.69e-15!46;CL:0000134!9.69e-15!46;CL:0000219!2.44e-14!54;CL:0000063!2.56e-13!66;CL:0000988!3.36e-12!32;CL:0002032!3.36e-12!32;CL:0000037!3.36e-12!32;CL:0000566!3.36e-12!32;CL:0000837!3.36e-12!32;CL:0002031!7.35e-11!25;CL:0000738!1.64e-08!17;CL:0002087!1.64e-08!17;CL:0000838!2.37e-08!12;CL:0000084!1.04e-07!11;CL:0000827!1.04e-07!11;CL:0000542!2.91e-07!13;CL:0000051!2.91e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.06e-15,46;CL:0000134,3.06e-15,46;CL:0000219,8.07e-15,54;CL:0000988,1.26e-12,32;CL:0002032,1.26e-12,32;CL:0000037,1.26e-12,32;CL:0000837,1.26e-12,32;CL:0002031,2.05e-11,25;CL:0000838,1.44e-08,12;CL:0000738,1.48e-08,17;CL:0002087,1.48e-08,17;CL:0000084,6.61e-08,11;CL:0000827,6.61e-08,11;CL:0000542,2.89e-07,13;CL:0000051,2.89e-07,13;CL:0000791,8.34e-07,9;CL:0000789,8.34e-07,9;CL:0002420,8.34e-07,9;CL:0002419,8.34e-07,9;CL:0000790,8.34e-07,9;CL:0000049,9.83e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.37e-20!70;UBERON:0002193!3.07e-19!48;UBERON:0002390!6.23e-18!45;UBERON:0003061!6.23e-18!45;UBERON:0002384!9.69e-15!46;UBERON:0000490!1.22e-12!66;UBERON:0005057!8.56e-12!51;UBERON:0004119!2.90e-11!130;UBERON:0000925!2.90e-11!130;UBERON:0006595!2.90e-11!130;UBERON:0001007!4.63e-11!128;UBERON:0001555!4.63e-11!128;UBERON:0007026!4.63e-11!128;UBERON:0003929!5.61e-11!55;UBERON:0004177!9.71e-11!29;UBERON:0004921!1.68e-10!126;UBERON:0004185!1.68e-10!126;UBERON:0005911!5.97e-10!69;UBERON:0003408!3.13e-09!24;UBERON:0003081!3.70e-09!88;UBERON:0002204!5.66e-09!32;UBERON:0002370!6.36e-09!23;UBERON:0000974!6.36e-09!23;UBERON:0004807!6.36e-09!23;UBERON:0005058!6.36e-09!23;UBERON:0003351!6.36e-09!23;UBERON:0009113!6.36e-09!23;UBERON:0003295!6.36e-09!23;UBERON:0009722!6.36e-09!23;UBERON:0005562!6.36e-09!23;UBERON:0007690!6.36e-09!23;UBERON:0006562!9.51e-09!24;UBERON:0001557!9.51e-09!24;UBERON:0001042!9.51e-09!24;UBERON:0008814!9.51e-09!24;UBERON:0009145!9.51e-09!24;UBERON:0002371!4.47e-08!16;UBERON:0000072!9.57e-08!27;UBERON:0003104!1.77e-07!131;UBERON:0009142!1.77e-07!131;UBERON:0000077!2.32e-07!97;UBERON:0001474!3.21e-07!22;UBERON:0004765!3.21e-07!22;UBERON:0001434!3.21e-07!22;UBERON:0002530!6.53e-07!65;UBERON:0001041!6.91e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.46e-20,48;UBERON:0002405,2.46e-20,48;UBERON:0002390,5.56e-19,45;UBERON:0003061,5.56e-19,45;UBERON:0002384,3.06e-15,46;UBERON:0004119,2.17e-13,118;UBERON:0000925,2.17e-13,118;UBERON:0006595,2.17e-13,118;UBERON:0001007,3.50e-13,116;UBERON:0001555,3.50e-13,116;UBERON:0007026,3.50e-13,116;UBERON:0000490,3.77e-13,66;UBERON:0004921,1.45e-12,114;UBERON:0004177,1.62e-11,29;UBERON:0005057,1.62e-11,29;UBERON:0003929,1.96e-11,55;UBERON:0000077,2.26e-11,35;UBERON:0005911,1.78e-10,69;UBERON:0003408,5.79e-10,24;UBERON:0002370,1.21e-09,23;UBERON:0000974,1.21e-09,23;UBERON:0004807,1.21e-09,23;UBERON:0005058,1.21e-09,23;UBERON:0003351,1.21e-09,23;UBERON:0009113,1.21e-09,23;UBERON:0003295,1.21e-09,23;UBERON:0009722,1.21e-09,23;UBERON:0005562,1.21e-09,23;UBERON:0007690,1.21e-09,23;UBERON:0006562,1.89e-09,24;UBERON:0001557,1.89e-09,24;UBERON:0001042,1.89e-09,24;UBERON:0008814,1.89e-09,24;UBERON:0009145,1.89e-09,24;UBERON:0002204,3.29e-09,32;UBERON:0003081,4.38e-09,87;UBERON:0001041,8.29e-09,80;UBERON:0000072,2.33e-08,27;UBERON:0002371,2.77e-08,16;UBERON:0001474,2.12e-07,22;UBERON:0004765,2.12e-07,22;UBERON:0001434,2.12e-07,22;UBERON:0001004,3.52e-07,42;UBERON:0002530,3.54e-07,65;UBERON:0000065,6.89e-07,41;UBERON:0000926,9.36e-07,120;UBERON:0004120,9.36e-07,120;UBERON:0006603,9.36e-07,120 | |||
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| |||
|short_description=p2@Tap1 | |||
}} |
Revision as of 16:46, 4 August 2015
Short description: | p2@Tap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000166287, ENSMUST00000166853_5end |
EntrezGene: | 21354 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.06e-15 | 46 |
mesenchymal cell | 3.06e-15 | 46 |
motile cell | 8.07e-15 | 54 |
hematopoietic cell | 1.26e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.26e-12 | 32 |
hematopoietic stem cell | 1.26e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.26e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 2.05e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.44e-08 | 12 |
leukocyte | 1.48e-08 | 17 |
nongranular leukocyte | 1.48e-08 | 17 |
T cell | 6.61e-08 | 11 |
pro-T cell | 6.61e-08 | 11 |
lymphocyte | 2.89e-07 | 13 |
common lymphoid progenitor | 2.89e-07 | 13 |
mature alpha-beta T cell | 8.34e-07 | 9 |
alpha-beta T cell | 8.34e-07 | 9 |
immature T cell | 8.34e-07 | 9 |
mature T cell | 8.34e-07 | 9 |
immature alpha-beta T cell | 8.34e-07 | 9 |
common myeloid progenitor | 9.83e-07 | 19 |