FF:11334-117F2: Difference between revisions

Revision as of 15:05, 15 May 2017

Name:	Small Airway Epithelial Cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs11975
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	58 years old adult
sex	male
age	58
cell type	pneumocyte
cell line	NA
company	Lonza
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004717

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11975		CAGE		DRX008465		DRR009337

Accession ID Hg19

Library id		BAM		CTSS
CNhs11975		DRZ000762		DRZ002147

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0666
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.233
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.404
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.141
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0436
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0604
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0.141
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.24
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.333
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.325
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	1.059
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.15
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.749
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.312
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.41
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.404
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.589
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11975

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0143
MA0003.1	MA0003.1	0.75
MA0004.1	MA0004.1	0.185
MA0006.1	MA0006.1	0.0134
MA0007.1	MA0007.1	0.409
MA0009.1	MA0009.1	0.184
MA0014.1	MA0014.1	0.499
MA0017.1	MA0017.1	0.531
MA0018.2	MA0018.2	0.0312
MA0019.1	MA0019.1	0.913
MA0024.1	MA0024.1	3.61734e-5
MA0025.1	MA0025.1	0.601
MA0027.1	MA0027.1	0.555
MA0028.1	MA0028.1	0.0747
MA0029.1	MA0029.1	0.0524
MA0030.1	MA0030.1	0.855
MA0031.1	MA0031.1	0.636
MA0035.2	MA0035.2	0.512
MA0038.1	MA0038.1	4.50989e-4
MA0039.2	MA0039.2	0.0596
MA0040.1	MA0040.1	0.377
MA0041.1	MA0041.1	0.535
MA0042.1	MA0042.1	0.232
MA0043.1	MA0043.1	0.456
MA0046.1	MA0046.1	0.888
MA0047.2	MA0047.2	0.204
MA0048.1	MA0048.1	0.594
MA0050.1	MA0050.1	4.50827e-9
MA0051.1	MA0051.1	1.64954e-6
MA0052.1	MA0052.1	0.00152
MA0055.1	MA0055.1	0.0465
MA0057.1	MA0057.1	0.155
MA0058.1	MA0058.1	0.0214
MA0059.1	MA0059.1	0.661
MA0060.1	MA0060.1	2.43706e-6
MA0061.1	MA0061.1	0.0322
MA0062.2	MA0062.2	0.67
MA0065.2	MA0065.2	0.746
MA0066.1	MA0066.1	0.774
MA0067.1	MA0067.1	0.057
MA0068.1	MA0068.1	0.093
MA0069.1	MA0069.1	0.214
MA0070.1	MA0070.1	0.242
MA0071.1	MA0071.1	0.199
MA0072.1	MA0072.1	0.36
MA0073.1	MA0073.1	0.843
MA0074.1	MA0074.1	0.771
MA0076.1	MA0076.1	0.473
MA0077.1	MA0077.1	0.377
MA0078.1	MA0078.1	0.907
MA0079.2	MA0079.2	0.0921
MA0080.2	MA0080.2	2.89197e-5
MA0081.1	MA0081.1	0.0146
MA0083.1	MA0083.1	0.0895
MA0084.1	MA0084.1	0.182
MA0087.1	MA0087.1	0.76
MA0088.1	MA0088.1	0.129
MA0090.1	MA0090.1	0.00226
MA0091.1	MA0091.1	0.21
MA0092.1	MA0092.1	0.35
MA0093.1	MA0093.1	0.113
MA0099.2	MA0099.2	0.0651
MA0100.1	MA0100.1	0.0252
MA0101.1	MA0101.1	0.128
MA0102.2	MA0102.2	0.941
MA0103.1	MA0103.1	1.10443e-7
MA0104.2	MA0104.2	0.0481
MA0105.1	MA0105.1	0.0027
MA0106.1	MA0106.1	1.281e-10
MA0107.1	MA0107.1	0.0878
MA0108.2	MA0108.2	0.709
MA0111.1	MA0111.1	0.753
MA0112.2	MA0112.2	0.334
MA0113.1	MA0113.1	0.971
MA0114.1	MA0114.1	0.286
MA0115.1	MA0115.1	0.975
MA0116.1	MA0116.1	0.0339
MA0117.1	MA0117.1	0.193
MA0119.1	MA0119.1	0.824
MA0122.1	MA0122.1	0.312
MA0124.1	MA0124.1	0.28
MA0125.1	MA0125.1	0.143
MA0131.1	MA0131.1	0.98
MA0135.1	MA0135.1	0.725
MA0136.1	MA0136.1	0.00267
MA0137.2	MA0137.2	0.00348
MA0138.2	MA0138.2	0.995
MA0139.1	MA0139.1	0.478
MA0140.1	MA0140.1	0.415
MA0141.1	MA0141.1	0.743
MA0142.1	MA0142.1	0.369
MA0143.1	MA0143.1	0.917
MA0144.1	MA0144.1	0.444
MA0145.1	MA0145.1	0.0402
MA0146.1	MA0146.1	0.368
MA0147.1	MA0147.1	0.0802
MA0148.1	MA0148.1	0.144
MA0149.1	MA0149.1	0.178
MA0150.1	MA0150.1	0.172
MA0152.1	MA0152.1	0.321
MA0153.1	MA0153.1	0.43
MA0154.1	MA0154.1	0.155
MA0155.1	MA0155.1	0.433
MA0156.1	MA0156.1	0.126
MA0157.1	MA0157.1	0.185
MA0159.1	MA0159.1	0.766
MA0160.1	MA0160.1	0.599
MA0162.1	MA0162.1	0.468
MA0163.1	MA0163.1	0.00723
MA0164.1	MA0164.1	0.992
MA0258.1	MA0258.1	0.186
MA0259.1	MA0259.1	0.999

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11975

Novel motif	Logo	P-value
1	1	0.418
10	10	0.0818
100	100	0.599
101	101	0.0213
102	102	0.324
103	103	0.301
104	104	0.858
105	105	0.77
106	106	0.0412
107	107	0.0947
108	108	0.0786
109	109	0.0966
11	11	0.906
110	110	0.961
111	111	0.441
112	112	0.724
113	113	0.999
114	114	0.761
115	115	0.305
116	116	0.634
117	117	0.973
118	118	0.607
119	119	0.774
12	12	0.596
120	120	0.077
121	121	0.685
122	122	0.537
123	123	0.671
124	124	0.0105
125	125	0.741
126	126	0.862
127	127	0.584
128	128	0.817
129	129	0.59
13	13	0.721
130	130	0.172
131	131	0.896
132	132	0.273
133	133	5.19342e-4
134	134	0.092
135	135	0.72
136	136	8.81196e-4
137	137	0.003
138	138	0.732
139	139	0.665
14	14	0.757
140	140	0.248
141	141	0.442
142	142	0.379
143	143	0.166
144	144	0.0797
145	145	0.549
146	146	0.191
147	147	0.101
148	148	0.0598
149	149	0.822
15	15	0.214
150	150	0.222
151	151	0.284
152	152	8.28033e-4
153	153	0.505
154	154	0.973
155	155	0.654
156	156	0.897
157	157	0.253
158	158	0.0714
159	159	0.772
16	16	0.0665
160	160	0.1
161	161	0.524
162	162	0.692
163	163	0.567
164	164	0.428
165	165	0.891
166	166	0.688
167	167	0.366
168	168	0.614
169	169	0.465
17	17	0.46
18	18	0.293
19	19	0.459
2	2	0.369
20	20	0.552
21	21	0.897
22	22	0.948
23	23	0.425
24	24	0.201
25	25	0.31
26	26	0.84
27	27	0.786
28	28	0.86
29	29	0.721
3	3	0.541
30	30	0.174
31	31	0.984
32	32	0.788
33	33	0.489
34	34	0.523
35	35	0.0152
36	36	0.0433
37	37	0.633
38	38	0.944
39	39	0.505
4	4	0.689
40	40	0.885
41	41	0.153
42	42	0.459
43	43	0.324
44	44	0.64
45	45	0.211
46	46	0.773
47	47	0.784
48	48	0.793
49	49	0.0104
5	5	0.364
50	50	0.708
51	51	0.621
52	52	0.148
53	53	0.0403
54	54	0.888
55	55	0.609
56	56	0.795
57	57	0.775
58	58	0.349
59	59	0.421
6	6	0.0696
60	60	0.286
61	61	0.972
62	62	0.185
63	63	0.595
64	64	0.721
65	65	0.964
66	66	0.715
67	67	0.66
68	68	0.439
69	69	0.678
7	7	0.651
70	70	0.04
71	71	0.132
72	72	0.634
73	73	6.23061e-4
74	74	0.00891
75	75	0.807
76	76	0.313
77	77	0.409
78	78	0.108
79	79	0.246
8	8	0.927
80	80	0.121
81	81	0.114
82	82	0.232
83	83	0.264
84	84	0.445
85	85	0.538
86	86	0.868
87	87	0.0108
88	88	0.661
89	89	0.297
9	9	0.226
90	90	0.309
91	91	0.447
92	92	0.457
93	93	0.373
94	94	0.296
95	95	0.109
96	96	0.248
97	97	0.713
98	98	0.194
99	99	0.107

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11975

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000166 human small airway epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002368 (respiratory epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000166 (human small airway epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000223 (endodermal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.24!171.63!EHF;;chr17:7493405..7493419,-!p1@SOX15!2.06!115.12!SOX15;;chr1:209979467..209979494,-!p1@IRF6!2.04!121.85!IRF6;;chr3:189507432..189507459,+!p1@TP63!2.04!109.16!TP63;;chr1:6479968..6479986,-!p1@HES2!1.94!86.10!HES2;;chr15:83953397..83953425,-!p1@BNC1!1.93!95.13!BNC1;;chr1:209979411..209979433,-!p2@IRF6!1.74!54.58!IRF6;;chr17:7492684..7492778,-!p2@SOX15!1.71!102.63!SOX15;;chr6:10412600..10412637,-!p1@TFAP2A!1.65!70.53!TFAP2A;;chr5:2751762..2751784,-!p1@IRX2!1.59!37.48!IRX2;;chr12:54785074..54785122,-!p2@ZNF385A!1.58!55.93!ZNF385A;;chr6:10415276..10415341,-!p2@TFAP2A!1.56!42.47!TFAP2A;;chr6:34524093..34524135,-!p1@SPDEF!1.42!25.37!SPDEF;;chr12:54785054..54785072,-!p4@ZNF385A!1.41!27.87!ZNF385A;;chr13:73633131..73633149,+!p1@KLF5!1.37!229.47!KLF5;;chr6:34524025..34524045,-!p3@SPDEF!1.35!21.14!SPDEF;;chr5:2751785..2751808,-!p2@IRX2!1.33!20.56!IRX2;;chr8:10588010..10588030,-!p1@SOX7!1.32!19.80!SOX7;;chr6:34524049..34524089,-!p2@SPDEF!1.29!18.45!SPDEF;;chr8:49833948..49833973,-!p2@SNAI2!1.28!111.66!SNAI2;;chr3:111314186..111314204,-!p1@ZBED2!1.24!16.53!ZBED2;;chr11:34645791..34645836,+!p3@EHF!1.22!15.57!EHF;;chr19:45908292..45908374,-!p1@PPP1R13L!1.21!134.15!PPP1R13L;;chr2:46524897..46524911,+!p2@EPAS1!1.20!41.13!EPAS1;;chr14:37051798..37051831,-!p1@NKX2-8!1.20!14.99!NKX2-8;;chr8:49833978..49833996,-!p1@SNAI2!1.19!294.82!SNAI2;;chr5:134369905..134369972,-!p1@PITX1!1.17!21.33!PITX1;;chr8:102504651..102504683,+!p1@GRHL2!1.12!12.30!GRHL2;;chr15:83953373..83953386,-!p2@BNC1!1.12!12.30!BNC1;;chr12:66218836..66218888,+!p1@HMGA2!1.09!104.94!HMGA2;;chr6:10415484..10415508,-!p3@TFAP2A!1.09!11.34!TFAP2A;;chr12:66218255..66218304,+!p3@HMGA2!1.07!29.02!HMGA2;;chr14:62162285..62162296,+!p3@HIF1A!1.05!53.24!HIF1A;;chr16:86612320..86612394,+!p1@FOXL1!1.01!9.23!FOXL1;;chr6:10412576..10412599,-!p5@TFAP2A!1.00!9.03!TFAP2A;;chr14:37131058..37131139,+!p1@PAX9!0.99!8.84!PAX9;;chr22:19748231..19748317,+!p1@TBX1!0.99!8.84!TBX1;;chr3:189507523..189507535,+!p5@TP63!0.98!8.65!TP63;;chr14:38064429..38064486,-!p1@FOXA1!0.96!8.07!FOXA1;;chr11:34642656..34642667,+!p2@EHF!0.95!7.88!EHF;;chr6:10413188..10413249,-!p7@TFAP2A!0.95!7.88!TFAP2A;;chr2:122042770..122042785,-!p1@TFCP2L1!0.94!7.69!TFCP2L1;;chr2:208030647..208030689,-!p1@KLF7!0.92!63.42!KLF7;;chr12:66218598..66218645,+!p2@HMGA2!0.89!32.48!HMGA2;;chr20:55204351..55204377,+!p1@TFAP2C!0.89!8.65!TFAP2C;;chr14:62162258..62162269,+!p2@HIF1A!0.88!66.11!HIF1A;;chr5:134369879..134369898,-!p2@PITX1!0.88!6.53!PITX1;;chr19:42636586..42636607,-!p1@POU2F2!0.87!18.45!POU2F2;;chr19:9811347..9811351,-!p1@ZNF812!0.87!6.34!ZNF812;;chr17:80797886..80797906,-!p1@ZNF750!0.87!6.34!ZNF750;;chr3:189507460..189507471,+!p3@TP63!0.87!6.34!TP63;;chr6:15246200..15246214,+!p2@JARID2!0.86!18.07!JARID2;;chr2:60778035..60778060,-!p4@BCL11A!0.85!7.30!BCL11A;;chr13:73636252..73636307,+!p2@KLF5!0.84!6.92!KLF5;;chr1:209979449..209979460,-!p3@IRF6!0.84!5.96!IRF6;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.96!KDM5D;;chr1:935467..935484,-!p1@HES4!0.83!27.48!HES4;;chr19:33865009..33865090,+!p3@CEBPG!0.83!7.88!CEBPG;;chr2:70142232..70142251,+!p1@MXD1!0.82!34.02!MXD1;;chr6:1312325..1312340,+!p1@FOXQ1!0.82!9.42!FOXQ1;;chr20:22564895..22564910,-!p1@FOXA2!0.82!5.57!FOXA2;;chr18:19749541..19749557,+!p1@GATA6!0.81!18.26!GATA6;;chr1:935398..935465,-!p2@HES4!0.81!11.72!HES4;;chr11:128392273..128392308,-!p2@ETS1!0.80!24.22!ETS1;;chr16:79634624..79634642,-!p1@MAF!0.79!21.72!MAF;;chr4:57547454..57547469,-!p1@HOPX!0.78!5.00!HOPX;;chr2:10091815..10091864,+!p1@GRHL1!0.76!6.53!GRHL1;;chr1:201979703..201979721,+!p2@ELF3!0.76!4.80!ELF3;;chr12:48298765..48298783,-!p2@VDR!0.75!10.38!VDR;;chr17:41622925..41622976,-!p3@ETV4!0.74!7.11!ETV4;;chr6:126102292..126102329,+!p3@NCOA7!0.73!15.76!NCOA7;;chr6:126240380..126240430,+!p2@NCOA7!0.73!12.30!NCOA7;;chr1:209979375..209979386,-!p4@IRF6!0.73!4.42!IRF6;;chr12:77459306..77459365,-!p1@E2F7!0.72!59.77!E2F7;;chr1:158979792..158979814,+!p2@IFI16!0.72!45.93!IFI16;;chr19:45579725..45579743,-!p1@ZNF296!0.72!21.33!ZNF296;;chr2:46524878..46524891,+!p3@EPAS1!0.72!7.88!EPAS1;;chr1:37945588..37945604,+!p3@ZC3H12A!0.72!4.23!ZC3H12A;;chr20:22565185..22565223,-!p3@FOXA2!0.72!4.23!FOXA2;;chr17:7492504..7492520,-!p3@SOX15!0.72!4.23!SOX15;;chr21:40177845..40177863,+!p1@ETS2!0.71!279.25!ETS2;;chrX:48900782..48900793,-!p3@TFE3!0.70!8.07!TFE3;;chr3:169381420..169381535,-!p1@MECOM!0.70!4.80!MECOM;;chr8:102504690..102504704,+!p3@GRHL2!0.70!4.04!GRHL2;;chr20:22565370..22565388,-!p2@FOXA2!0.69!3.84!FOXA2;;chr12:66218904..66218913,+!p11@HMGA2!0.69!3.84!HMGA2;;chr18:19749517..19749531,+!p3@GATA6!0.67!7.11!GATA6;;chr6:10415263..10415274,-!p8@TFAP2A!0.67!3.65!TFAP2A;;chr12:80084737..80084763,-!p3@PAWR!0.66!15.18!PAWR;;chr12:66218212..66218244,+!p5@HMGA2!0.66!5.57!HMGA2;;chr16:67881588..67881612,-!p2@CENPT!0.66!5.19!CENPT;;chr6:10412392..10412409,-!p4@TFAP2A!0.66!4.23!TFAP2A;;chr9:110252035..110252057,-!p1@KLF4!0.65!64.96!KLF4;;chr3:5021268..5021282,+!p4@BHLHE40!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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000223;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000065
 |ffid_belonging_in_development=CL:0000223
 |fonse_cell_line=

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FF:11334-117F2: Difference between revisions

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Revision as of 15:05, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0