FF:13097-140D1: Difference between revisions

Revision as of 18:30, 29 June 2012

Name:	MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	breast
dev stage	NA
sex	female
age	NA
cell type	mammary gland epithelial cell
cell line	MCF7
company	NA
collaboration	Mariko Okada Hatakeyama (RIKEN RCAI)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	Repurified by minelute

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0445
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.249
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.097
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0874
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	1.286
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.465
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.64
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.253
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.105
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.952
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.253
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0.695
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.253
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.619
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12475

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0474
MA0003.1	MA0003.1	0.69
MA0004.1	MA0004.1	0.0698
MA0006.1	MA0006.1	0.669
MA0007.1	MA0007.1	0.754
MA0009.1	MA0009.1	0.835
MA0014.1	MA0014.1	0.145
MA0017.1	MA0017.1	0.0624
MA0018.2	MA0018.2	0.636
MA0019.1	MA0019.1	0.208
MA0024.1	MA0024.1	0.00181
MA0025.1	MA0025.1	0.17
MA0027.1	MA0027.1	0.881
MA0028.1	MA0028.1	7.93636e-4
MA0029.1	MA0029.1	0.143
MA0030.1	MA0030.1	0.142
MA0031.1	MA0031.1	0.518
MA0035.2	MA0035.2	0.353
MA0038.1	MA0038.1	0.00119
MA0039.2	MA0039.2	0.00115
MA0040.1	MA0040.1	0.978
MA0041.1	MA0041.1	0.502
MA0042.1	MA0042.1	0.948
MA0043.1	MA0043.1	0.176
MA0046.1	MA0046.1	0.0892
MA0047.2	MA0047.2	0.0466
MA0048.1	MA0048.1	0.432
MA0050.1	MA0050.1	3.35482e-5
MA0051.1	MA0051.1	0.0115
MA0052.1	MA0052.1	0.498
MA0055.1	MA0055.1	0.0196
MA0057.1	MA0057.1	0.689
MA0058.1	MA0058.1	0.0328
MA0059.1	MA0059.1	0.772
MA0060.1	MA0060.1	3.422e-27
MA0061.1	MA0061.1	0.00108
MA0062.2	MA0062.2	6.46199e-6
MA0065.2	MA0065.2	0.407
MA0066.1	MA0066.1	0.803
MA0067.1	MA0067.1	0.173
MA0068.1	MA0068.1	0.86
MA0069.1	MA0069.1	0.477
MA0070.1	MA0070.1	0.0274
MA0071.1	MA0071.1	0.826
MA0072.1	MA0072.1	0.591
MA0073.1	MA0073.1	0.84
MA0074.1	MA0074.1	0.705
MA0076.1	MA0076.1	1.50936e-4
MA0077.1	MA0077.1	0.576
MA0078.1	MA0078.1	0.33
MA0079.2	MA0079.2	0.281
MA0080.2	MA0080.2	9.2531e-8
MA0081.1	MA0081.1	0.475
MA0083.1	MA0083.1	0.331
MA0084.1	MA0084.1	0.432
MA0087.1	MA0087.1	0.758
MA0088.1	MA0088.1	0.731
MA0090.1	MA0090.1	0.895
MA0091.1	MA0091.1	0.091
MA0092.1	MA0092.1	0.599
MA0093.1	MA0093.1	0.0646
MA0099.2	MA0099.2	0.0249
MA0100.1	MA0100.1	0.369
MA0101.1	MA0101.1	0.0621
MA0102.2	MA0102.2	0.00566
MA0103.1	MA0103.1	2.24802e-6
MA0104.2	MA0104.2	0.423
MA0105.1	MA0105.1	5.75809e-6
MA0106.1	MA0106.1	0.412
MA0107.1	MA0107.1	0.00516
MA0108.2	MA0108.2	0.00523
MA0111.1	MA0111.1	0.387
MA0112.2	MA0112.2	0.555
MA0113.1	MA0113.1	0.493
MA0114.1	MA0114.1	0.507
MA0115.1	MA0115.1	0.917
MA0116.1	MA0116.1	0.00112
MA0117.1	MA0117.1	0.253
MA0119.1	MA0119.1	0.0646
MA0122.1	MA0122.1	0.176
MA0124.1	MA0124.1	0.223
MA0125.1	MA0125.1	0.0123
MA0131.1	MA0131.1	0.126
MA0135.1	MA0135.1	0.0949
MA0136.1	MA0136.1	0.00776
MA0137.2	MA0137.2	0.0997
MA0138.2	MA0138.2	0.801
MA0139.1	MA0139.1	0.666
MA0140.1	MA0140.1	0.404
MA0141.1	MA0141.1	0.533
MA0142.1	MA0142.1	0.82
MA0143.1	MA0143.1	0.0917
MA0144.1	MA0144.1	0.037
MA0145.1	MA0145.1	0.796
MA0146.1	MA0146.1	0.0601
MA0147.1	MA0147.1	0.609
MA0148.1	MA0148.1	0.181
MA0149.1	MA0149.1	0.363
MA0150.1	MA0150.1	0.017
MA0152.1	MA0152.1	0.529
MA0153.1	MA0153.1	0.36
MA0154.1	MA0154.1	0.0462
MA0155.1	MA0155.1	0.522
MA0156.1	MA0156.1	0.0775
MA0157.1	MA0157.1	0.991
MA0159.1	MA0159.1	0.459
MA0160.1	MA0160.1	0.843
MA0162.1	MA0162.1	0.689
MA0163.1	MA0163.1	0.00396
MA0164.1	MA0164.1	0.843
MA0258.1	MA0258.1	0.814
MA0259.1	MA0259.1	0.112

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12475

Novel motif	Logo	P-value
1	1	0.172
10	10	0.619
100	100	0.571
101	101	0.139
102	102	0.334
103	103	0.165
104	104	0.872
105	105	0.154
106	106	0.0264
107	107	0.0823
108	108	0.665
109	109	0.092
11	11	0.505
110	110	0.976
111	111	0.0279
112	112	0.24
113	113	0.0848
114	114	0.0131
115	115	0.246
116	116	0.547
117	117	0.387
118	118	0.319
119	119	0.313
12	12	0.788
120	120	0.864
121	121	0.805
122	122	0.453
123	123	0.101
124	124	0.12
125	125	0.291
126	126	0.779
127	127	0.802
128	128	0.0696
129	129	0.505
13	13	0.572
130	130	0.00194
131	131	0.21
132	132	0.814
133	133	0.0092
134	134	0.154
135	135	0.299
136	136	0.00155
137	137	0.0975
138	138	0.133
139	139	0.0596
14	14	1
140	140	0.299
141	141	0.789
142	142	0.267
143	143	0.0359
144	144	0.345
145	145	0.273
146	146	0.488
147	147	0.746
148	148	4.61885e-4
149	149	0.215
15	15	0.404
150	150	0.978
151	151	0.157
152	152	0.778
153	153	0.0883
154	154	0.394
155	155	0.0492
156	156	0.768
157	157	0.423
158	158	0.268
159	159	0.655
16	16	0.491
160	160	0.441
161	161	0.639
162	162	0.893
163	163	0.667
164	164	0.449
165	165	0.37
166	166	0.157
167	167	0.891
168	168	0.235
169	169	0.967
17	17	0.829
18	18	0.0868
19	19	0.236
2	2	0.44
20	20	0.28
21	21	0.248
22	22	0.637
23	23	0.00184
24	24	0.946
25	25	0.937
26	26	0.317
27	27	0.571
28	28	0.845
29	29	0.842
3	3	0.112
30	30	0.436
31	31	0.471
32	32	0.152
33	33	0.523
34	34	0.242
35	35	0.103
36	36	0.281
37	37	0.16
38	38	0.994
39	39	0.516
4	4	0.621
40	40	0.243
41	41	0.174
42	42	0.194
43	43	0.104
44	44	0.266
45	45	0.903
46	46	0.139
47	47	0.883
48	48	0.977
49	49	0.146
5	5	0.126
50	50	0.479
51	51	0.539
52	52	0.313
53	53	0.132
54	54	0.377
55	55	0.439
56	56	0.41
57	57	0.347
58	58	0.297
59	59	0.317
6	6	0.531
60	60	0.0373
61	61	0.721
62	62	0.068
63	63	0.239
64	64	0.784
65	65	0.268
66	66	0.0307
67	67	0.514
68	68	0.961
69	69	0.639
7	7	0.655
70	70	0.0424
71	71	0.361
72	72	0.578
73	73	0.791
74	74	0.0659
75	75	0.99
76	76	0.979
77	77	0.411
78	78	0.944
79	79	0.263
8	8	0.415
80	80	0.0469
81	81	0.134
82	82	0.286
83	83	0.367
84	84	0.818
85	85	0.0701
86	86	0.464
87	87	0.00296
88	88	0.667
89	89	0.0853
9	9	0.151
90	90	7.07333e-5
91	91	0.0964
92	92	0.0211
93	93	0.188
94	94	0.121
95	95	0.02
96	96	0.0849
97	97	0.964
98	98	0.28
99	99	0.937

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12475

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000426 human MCF7 breast cancer cell line 0min after EGF1 treatment sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
5093 (thoracic cancer)
305 (carcinoma)
299 (adenocarcinoma)
1612 (breast cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000310 (breast)
0002100 (trunk)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0009569 (subdivision of trunk)
0001443 (chest)
0000915 (thoracic segment of trunk)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr10:8096631..8096660,+!p1@GATA3!2.81!768.08!GATA3;;chr14:38064429..38064486,-!p1@FOXA1!2.62!420.39!FOXA1;;chr6:34524093..34524135,-!p1@SPDEF!2.34!215.73!SPDEF;;chr20:55204351..55204377,+!p1@TFAP2C!2.15!177.01!TFAP2C;;chr1:201979743..201979762,+!p1@ELF3!1.92!81.39!ELF3;;chr10:8096772..8096787,+!p2@GATA3!1.84!80.60!GATA3;;chr22:29196433..29196445,-!p4@XBP1!1.74!59.27!XBP1;;chr17:59477233..59477263,+!p1@TBX2!1.70!146.98!TBX2;;chr8:102504651..102504683,+!p1@GRHL2!1.70!48.99!GRHL2;;chr5:2751762..2751784,-!p1@IRX2!1.68!47.41!IRX2;;chr10:8097321..8097348,+!p4@GATA3!1.68!46.62!GATA3;;chr10:8095593..8095625,+!p3@GATA3!1.63!48.20!GATA3;;chr17:59477197..59477212,+!p2@TBX2!1.56!60.06!TBX2;;chr22:29196492..29196503,-!p3@XBP1!1.53!49.78!XBP1;;chr6:152128810..152128827,+!p2@ESR1!1.52!32.40!ESR1;;chr15:96869511..96869525,+!p16@NR2F2!1.50!33.98!NR2F2;;chr8:99956662..99956684,+!p1@OSR2!1.49!45.04!OSR2;;chr6:126070769..126070801,+!p1@HEY2!1.43!30.03!HEY2;;chr14:37131058..37131139,+!p1@PAX9!1.41!24.50!PAX9;;chr9:129376201..129376225,+!p1@LMX1B!1.41!24.50!LMX1B;;chr10:8100691..8100732,+!p5@GATA3!1.38!22.92!GATA3;;chr22:29196547..29196563,-!p2@XBP1!1.37!794.16!XBP1;;chr12:53625966..53626012,-!p2@RARG!1.34!53.73!RARG;;chr20:50159198..50159299,-!p1@NFATC2!1.28!26.08!NFATC2;;chr11:65554528..65554546,+!p1@OVOL1!1.28!18.17!OVOL1;;chr16:29818199..29818216,+!p11@MAZ!1.26!27.66!MAZ;;chr14:38064307..38064323,-!p3@FOXA1!1.26!17.38!FOXA1;;chr3:147111198..147111225,+!p4@ZIC1!1.26!17.38!ZIC1;;chr9:129376233..129376251,+!p2@LMX1B!1.26!17.38!LMX1B;;chr14:38064590..38064606,-!p2@FOXA1!1.25!16.59!FOXA1;;chr19:45579725..45579743,-!p1@ZNF296!1.24!71.91!ZNF296;;chr14:75988771..75988826,+!p1@BATF!1.23!21.34!BATF;;chr6:135502501..135502546,+!p1@MYB!1.23!18.96!MYB;;chr7:156803329..156803362,-!p1@MNX1!1.23!15.80!MNX1;;chr8:102504979..102505010,+!p2@GRHL2!1.18!14.22!GRHL2;;chr10:8097295..8097320,+!p6@GATA3!1.18!14.22!GATA3;;chr20:46130619..46130664,+!p1@NCOA3!1.17!365.07!NCOA3;;chr14:105267423..105267443,+!p2@ZBTB42!1.16!13.43!ZBTB42;;chr5:2751785..2751808,-!p2@IRX2!1.16!13.43!IRX2;;chr8:102504690..102504704,+!p3@GRHL2!1.16!13.43!GRHL2;;chr5:174151553..174151610,+!p1@MSX2!1.14!21.34!MSX2;;chr10:135122906..135122921,+!p4@ZNF511!1.13!12.64!ZNF511;;chr11:65554563..65554576,+!p2@OVOL1!1.13!12.64!OVOL1;;chr14:38064495..38064506,-!p4@FOXA1!1.13!12.64!FOXA1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.13!12.64!ZBED1;;chr17:59477403..59477414,+!p4@TBX2!1.13!12.64!TBX2;;chr18:3449330..3449344,+!p10@TGIF1!1.11!15.80!TGIF1;;chr3:128206762..128206781,-!p2@GATA2!1.10!71.91!GATA2;;chr20:42295745..42295765,+!p1@MYBL2!1.09!186.49!MYBL2;;chr17:61920023..61920110,-!p1@SMARCD2!1.08!155.67!SMARCD2;;chr16:29818160..29818188,+!p6@MAZ!1.08!51.36!MAZ;;chr14:38065203..38065215,-!p9@FOXA1!1.08!11.06!FOXA1;;chr1:201979703..201979721,+!p2@ELF3!1.08!11.06!ELF3;;chr1:149858461..149858479,+!p1@BOLA1!1.05!3977.89!BOLA1;;chr20:52210553..52210568,-!p7@ZNF217!1.05!10.27!ZNF217;;chr11:129245526..129245553,+!p1@BARX2!1.05!10.27!BARX2;;chr17:59477275..59477286,+!p3@TBX2!1.04!13.43!TBX2;;chr16:54964740..54964789,+!p1@IRX5!1.03!14.22!IRX5;;chr10:48355030..48355090,+!p1@ZNF488!1.03!12.64!ZNF488;;chr1:935398..935465,-!p2@HES4!1.02!19.76!HES4;;chr17:17726907..17726958,-!p2@SREBF1!1.01!58.48!SREBF1;;chr17:61919985..61920012,-!p3@SMARCD2!1.00!22.13!SMARCD2;;chr1:209979467..209979494,-!p1@IRF6!1.00!10.27!IRF6;;chr14:95236440..95236465,-!p1@GSC!0.99!8.69!GSC;;chr6:135502472..135502489,+!p3@MYB!0.99!8.69!MYB;;chr12:54332608..54332636,+!p1@HOXC13!0.99!8.69!HOXC13;;chr22:29196030..29196075,-!p5@XBP1!0.98!11.06!XBP1;;chr7:149470641..149470694,-!p1@ZNF467!0.97!38.72!ZNF467;;chr19:33793430..33793447,-!p1@CEBPA!0.97!36.35!CEBPA;;chr5:174151612..174151633,+!p2@MSX2!0.95!7.90!MSX2;;chr6:152128782..152128803,+!p5@ESR1!0.95!7.90!ESR1;;chr6:34524049..34524089,-!p2@SPDEF!0.95!7.90!SPDEF;;chr3:147111231..147111281,+!p3@ZIC1!0.95!7.90!ZIC1;;chr17:7388010..7388017,-!p5@ZBTB4!0.94!13.43!ZBTB4;;chr8:37553292..37553317,+!p1@ZNF703!0.93!186.49!ZNF703;;chr5:176738887..176738934,-!p1@MXD3!0.93!52.15!MXD3;;chr1:23857698..23857733,-!p1@E2F2!0.93!14.22!E2F2;;chr2:239148671..239148686,-!p1@HES6!0.92!27.66!HES6;;chr8:116681409..116681431,-!p2@TRPS1!0.92!20.55!TRPS1;;chr12:80084737..80084763,-!p3@PAWR!0.91!27.66!PAWR;;chr16:54964899..54964914,+!p2@IRX5!0.91!7.11!IRX5;;chr17:48045917..48045977,+!p1@DLX4!0.91!7.11!DLX4;;chr17:7197911..7197964,-!p1@YBX2!0.91!7.11!YBX2;;chr6:20402102..20402152,+!p1@E2F3!0.90!30.03!E2F3;;chr2:157199008..157199023,-!p3@NR4A2!0.90!15.01!NR4A2;;chr1:41827095..41827155,+!p1@FOXO6!0.90!9.48!FOXO6;;chr20:46130602..46130613,+!p3@NCOA3!0.89!20.55!NCOA3;;chr1:149871171..149871192,+!p4@BOLA1!0.89!15.80!BOLA1;;chr15:67418047..67418093,+!p4@SMAD3!0.89!8.69!SMAD3;;chr14:69262789..69262822,-!p2@ZFP36L1!0.87!17.38!ZFP36L1;;chr20:52210338..52210352,-!p4@ZNF217!0.87!7.90!ZNF217;;chr15:67418119..67418162,+!p5@SMAD3!0.87!7.11!SMAD3;;chr1:154975258..154975330,+!p1@ZBTB7B!0.86!24.50!ZBTB7B;;chr1:10856639..10856662,-!p2@CASZ1!0.86!6.32!CASZ1;;chr11:101000445..101000465,-!p5@PGR!0.86!6.32!PGR;;chr11:101000537..101000553,-!p1@PGR!0.86!6.32!PGR;;chr9:110252035..110252057,-!p1@KLF4!0.85!102.73!KLF4;;chr6:10412600..10412637,-!p1@TFAP2A!0.84!10.27!TFAP2A;;chr20:52185447..52185462,-!p2@ZNF217!0.83!9.48!ZNF217;;chr2:10091815..10091864,+!p1@GRHL1!0.83!7.90!GRHL1;;chr19:49140609..49140643,-!p1@DBP!0.82!33.98!DBP;;chr8:22550982..22550999,-!p1@EGR3!0.82!16.59!EGR3;;chr6:41040923..41040952,+!p2@NFYA!0.82!15.80!NFYA;;chr17:61919812..61919833,-!p6@SMARCD2!0.82!7.11!SMARCD2;;chr15:67418177..67418204,+!p9@SMAD3!0.82!5.53!SMAD3;;chr1:153940716..153940739,+!p4@CREB3L4!0.82!5.53!CREB3L4;;chr10:8097228..8097239,+!p13@GATA3!0.82!5.53!GATA3;;chr10:8100452..8100463,+!p20@GATA3!0.82!5.53!GATA3;;chr3:181429704..181429722,+!p1@SOX2!0.82!5.53!SOX2;;chr6:152011654..152011682,+!p1@ESR1!0.82!5.53!ESR1;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.82!5.53!EN2;;chr8:144512897..144512903,-!p1@MAFA!0.82!5.53!MAFA;;chr20:62601243..62601291,-!p1@ZNF512B!0.81!57.68!ZNF512B;;chr8:37553261..37553282,+!p2@ZNF703!0.80!44.25!ZNF703;;chr15:96876966..96877017,+!p12@NR2F2!0.80!7.90!NR2F2;;chr2:66662249..66662267,+!p2@MEIS1!0.79!21.34!MEIS1;;chr8:125985531..125985571,+!p1@ZNF572!0.79!11.06!ZNF572;;chr20:52210368..52210384,-!p1@ZNF217!0.79!10.27!ZNF217;;chr20:46130727..46130734,+!p4@NCOA3!0.79!7.11!NCOA3;;chr1:151254738..151254787,+!p1@ZNF687!0.77!49.78!ZNF687;;chr20:46130672..46130686,+!p2@NCOA3!0.77!23.71!NCOA3;;chr8:145159447..145159458,+!p4@MAF1!0.77!12.64!MAF1;;chr19:48774586..48774670,+!p1@ZNF114!0.77!6.32!ZNF114;;chr22:31742303..31742350,-!p1@PATZ1!0.76!56.89!PATZ1;;chr9:99180617..99180658,-!p1@ZNF367!0.76!11.06!ZNF367;;chr1:10856665..10856683,-!p4@CASZ1!0.76!4.74!CASZ1;;chr6:152126790..152126828,+!p3@ESR1!0.76!4.74!ESR1;;chr6:34524025..34524045,-!p3@SPDEF!0.76!4.74!SPDEF;;chr17:80797886..80797906,-!p1@ZNF750!0.76!4.74!ZNF750;;chr1:8939265..8939367,-!p5@ENO1!0.75!10.27!ENO1;;chr20:50808667..50808729,-!p3@ZFP64!0.75!9.48!ZFP64;;chr6:15246217..15246228,+!p3@JARID2!0.75!8.69!JARID2;;chr8:67525443..67525459,-!p2@MYBL1!0.75!7.11!MYBL1;;chr11:47236584..47236679,+!p1@DDB2!0.74!55.31!DDB2;;chr19:12035937..12035969,+!p3@ZNF700,p4@ZNF763!0.74!6.32!ZNF700;;chr11:120107344..120107351,+!p1@POU2F3!0.74!5.53!POU2F3;;chr20:39317868..39317884,-!p1@MAFB!0.73!58.48!MAFB;;chr17:38465441..38465481,+!p6@RARA!0.73!5.53!RARA;;chr15:96873984..96873999,+!p3@NR2F2!0.72!34.77!NR2F2;;chr20:32274179..32274213,-!p1@E2F1!0.72!31.61!E2F1;;chr1:149871114..149871134,+!p3@BOLA1!0.72!18.96!BOLA1;;chr19:49140595..49140607,-!p3@DBP!0.72!6.32!DBP;;chr19:58874112..58874125,-!p1@ZNF497,p5@A1BG!0.72!6.32!ZNF497;;chr19:19303047..19303079,+!p3@RFXANK!0.71!10.27!RFXANK;;chr15:96874927..96874938,+!p8@NR2F2!0.71!9.48!NR2F2;;chr17:61920116..61920131,-!p5@SMARCD2!0.71!8.69!SMARCD2;;chr19:12551785..12551823,-!p1@ZNF443!0.71!7.11!ZNF443;;chr19:12551849..12551868,-!p4@ZNF443!0.71!4.74!ZNF443;;chr1:204042233..204042249,+!p1@SOX13!0.70!28.45!SOX13;;chr1:153940354..153940395,+!p1@CREB3L4!0.70!18.17!CREB3L4;;chr11:65479462..65479517,+!p2@KAT5!0.70!18.17!KAT5;;chr1:153939955..153940009,+!p2@CREB3L4!0.70!10.27!CREB3L4;;chr16:29818132..29818144,+!p12@MAZ!0.70!8.69!MAZ;;chr14:61116168..61116180,-!p2@SIX1!0.70!4.74!SIX1;;chr12:2986275..2986363,-!p1@FOXM1!0.69!44.25!FOXM1;;chr3:24536253..24536328,-!p1@THRB!0.69!7.90!THRB;;chr16:30546275..30546297,-!p2@ZNF747!0.69!5.53!ZNF747;;chr14:95236551..95236576,-!p2@GSC!0.69!3.95!GSC;;chr15:67418099..67418118,+!p16@SMAD3!0.69!3.95!SMAD3;;chr17:38487563..38487578,+!p10@RARA!0.69!3.95!RARA;;chr17:48072574..48072597,-!p1@DLX3!0.69!3.95!DLX3;;chr19:3574330..3574393,+!p2@HMG20B!0.69!3.95!HMG20B;;chr1:10856694..10856715,-!p3@CASZ1!0.69!3.95!CASZ1;;chr1:3569072..3569093,+!p1@TP73!0.69!3.95!TP73;;chr1:40367668..40367684,-!p2@MYCL1!0.69!3.95!MYCL1;;chr1:6479968..6479986,-!p1@HES2!0.69!3.95!HES2;;chr21:38071430..38071456,+!p1@SIM2!0.69!3.95!SIM2;;chr9:126774018..126774055,+!p1@LHX2!0.69!3.95!LHX2;;chr6:10413188..10413249,-!p7@TFAP2A!0.69!3.95!TFAP2A;;chr6:126070748..126070768,+!p2@HEY2!0.69!3.95!HEY2;;chr7:73038839..73038862,-!p1@MLXIPL!0.69!3.95!MLXIPL;;chr3:128207349..128207386,-!p3@GATA2!0.69!3.95!GATA2;;chr10:8097357..8097368,+!p15@GATA3!0.69!3.95!GATA3;;chr14:38064198..38064200,-!p11@FOXA1!0.69!3.95!FOXA1;;chr14:38064536..38064550,-!p7@FOXA1!0.69!3.95!FOXA1;;chr14:64971893..64971928,-!p8@ZBTB25!0.69!3.95!ZBTB25;;chr1:202777535..202777556,-!p1@KDM5B!0.68!146.98!KDM5B;;chr12:54772960..54773015,-!p3@ZNF385A!0.67!20.55!ZNF385A;;chr18:3448422..3448439,+!p11@TGIF1!0.66!5.53!TGIF1;;chr19:12512015..12512044,-!p2@ZNF799!0.66!5.53!ZNF799;;chr16:54320617..54320643,-!p3@IRX3!0.66!4.74!IRX3;;chr19:50431973..50431998,+!p5@ATF5!0.66!4.74!ATF5;;chr20:52185283..52185294,-!p5@ZNF217!0.66!4.74!ZNF217;;chr19:18392236..18392248,-!p2@JUND!0.64!26.08!JUND;;chr19:11849700..11849803,-!p1@ZNF823!0.64!18.96!ZNF823;;chr20:49547593..49547611,-!p3@ADNP!0.64!12.64!ADNP;;chr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0.25!39.51!GATAD1;;chr19:56632592..56632670,-!p1@ZNF787!0.25!35.56!ZNF787;;chr6:32095968..32096032,-!p1@ATF6B!0.25!13.43!ATF6B;;chr17:80477643..80477678,+!p2@FOXK2!0.25!9.48!FOXK2;;chr2:95831389..95831432,-!p1@ZNF514!0.25!6.32!ZNF514;;chr2:242576641..242576731,-!p2@THAP4!0.25!5.53!THAP4;;chr19:20011744..20011770,+!p1@ZNF93!0.25!5.53!ZNF93;;chr10:94449703..94449718,+!p1@HHEX!0.25!5.53!HHEX;;chr5:43121711..43121753,+!p2@ZNF131!0.25!3.95!ZNF131;;chr12:133656995..133657049,+!p2@ZNF140!0.25!3.16!ZNF140;;chr10:114710218..114710229,+!p4@TCF7L2!0.25!2.37!TCF7L2;;chr19:19779589..19779616,+!p2@ZNF101!0.25!2.37!ZNF101;;chr19:11616645..11616663,-!p1@ZNF653!0.25!1.58!ZNF653;;chr9:88969226..88969237,-!p4@ZCCHC6!0.25!1.58!ZCCHC6;;chr19:53039233..53039247,+!p2@ZNF808!0.25!1.58!ZNF808;;chr14:21566882..21566898,-!p3@ZNF219!0.25!1.58!ZNF219;;chr10:102505493..102505546,+!p2@PAX2!0.25!0.79!PAX2;;chr10:104001259..104001274,-!p1@PITX3!0.25!0.79!PITX3;;chr10:124768217..124768228,-!p2@IKZF5!0.25!0.79!IKZF5;;chr10:21823079..21823086,+!p20@MLLT10!0.25!0.79!MLLT10;;chr10:63661053..63661079,+!p14@ARID5B!0.25!0.79!ARID5B;;chr10:98591637..98591643,+!p8@LCOR!0.25!0.79!LCOR;;chr10:98591737..98591748,+!p12@LCOR!0.25!0.79!LCOR;;chr11:100999679..100999686,-!p11@PGR!0.25!0.79!PGR;;chr11:129245736..129245758,+!p2@BARX2!0.25!0.79!BARX2;;chr11:129245763..129245768,+!p4@BARX2!0.25!0.79!BARX2;;chr11:19262421..19262455,-!p3@E2F8!0.25!0.79!E2F8;;chr11:2291814..2291825,-!p2@ASCL2!0.25!0.79!ASCL2;;chr11:2292201..2292212,-!p3@ASCL2!0.25!0.79!ASCL2;;chr11:34535297..34535317,-!p1@ELF5!0.25!0.79!ELF5;;chr11:34535332..34535347,-!p2@ELF5!0.25!0.79!ELF5;;chr11:65480222..65480241,+!p4@KAT5!0.25!0.79!KAT5;;chr11:65686689..65686700,+!p14@DRAP1!0.25!0.79!DRAP1;;chr12:103351444..103351461,+!p1@ASCL1!0.25!0.79!ASCL1;;chr12:104531768..104531782,-!p7@NFYB!0.25!0.79!NFYB;;chr12:10856697..10856712,-!p12@CSDA!0.25!0.79!CSDA;;chr12:10875481..10875504,-!p14@CSDA!0.25!0.79!CSDA;;chr12:2968536..2968539,-!p3@FOXM1!0.25!0.79!FOXM1;;chr12:3068668..3068689,+!p7@TEAD4!0.25!0.79!TEAD4;;chr12:46123682..46123698,+!p7@ARID2!0.25!0.79!ARID2;;chr12:52448338..52448401,+!p7@NR4A1!0.25!0.79!NR4A1;;chr12:53774025..53774031,+!p10@SP1!0.25!0.79!SP1;;chr12:53994805..53994817,-!p7@ATF7!0.25!0.79!ATF7;;chr12:54378864..54378884,+!p6@HOXC10!0.25!0.79!HOXC10;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.25!0.79!HOXC5;;chr12:54422217..54422239,+!p3@HOXC6!0.25!0.79!HOXC6;;chr12:54694807..54694832,-!p3@NFE2!0.25!0.79!NFE2;;chr12:80083991..80084002,-!p40@PAWR!0.25!0.79!PAWR;;chr13:100634004..100634025,+!p2@ZIC2!0.25!0.79!ZIC2;;chr13:100634031..100634045,+!p1@ZIC2!0.25!0.79!ZIC2;;chr13:100634088..100634099,+!p5@ZIC2!0.25!0.79!ZIC2;;chr13:100638124..100638136,+!p7@ZIC2!0.25!0.79!ZIC2;;chr13:41593392..41593403,-!p7@ELF1!0.25!0.79!ELF1;;chr13:41593493..41593506,-!p8@ELF1!0.25!0.79!ELF1;;chr13:45150455..45150472,-!p8@TSC22D1!0.25!0.79!TSC22D1;;chr14:21567009..21567025,-!p9@ZNF219!0.25!0.79!ZNF219;;chr14:21572366..21572375,-!p16@ZNF219!0.25!0.79!ZNF219;;chr14:33403648..33403710,+!p3@NPAS3!0.25!0.79!NPAS3;;chr14:33403881..33403924,+!p1@NPAS3!0.25!0.79!NPAS3;;chr14:35873069..35873078,-!p13@NFKBIA!0.25!0.79!NFKBIA;;chr14:35874077..35874091,-!p8@NFKBIA!0.25!0.79!NFKBIA;;chr14:37051707..37051716,-!p5@NKX2-8!0.25!0.79!NKX2-8;;chr14:45722418..45722426,-!p6@MIS18BP1!0.25!0.79!MIS18BP1;;chr14:61190754..61190776,-!p6@SIX4!0.25!0.79!SIX4;;chr9:37034469..37034474,-!p1@PAX5!0.25!0.79!PAX5;;chrX:66765139..66765146,+!p5@AR!0.25!0.79!AR;;chrX:66763914..66763933,+!p3@AR!0.25!0.79!AR;;chrX:131547625..131547644,-!p4@MBNL3!0.25!0.79!MBNL3;;chr9:22446814..22446830,+!p4@DMRTA1!0.25!0.79!DMRTA1;;chrX:139587228..139587234,-!p1@SOX3!0.25!0.79!SOX3;;

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FF:13097-140D1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:30, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0