FF:11506-119G3: Difference between revisions

Revision as of 21:15, 9 July 2012

Name:	Fibroblast - Lymphatic, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lymph node
dev stage	NA
sex	NA
age	NA
cell type	fibroblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	lot:5347
catalog number	SC2535
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.193
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.14
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0823
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.461
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.175
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.281
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.281
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.233
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0791
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0518
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00718
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.365
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.281
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.234
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.667
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.281
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.281
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11322

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0144
MA0003.1	MA0003.1	0.158
MA0004.1	MA0004.1	0.965
MA0006.1	MA0006.1	0.394
MA0007.1	MA0007.1	0.0387
MA0009.1	MA0009.1	0.807
MA0014.1	MA0014.1	0.606
MA0017.1	MA0017.1	0.159
MA0018.2	MA0018.2	2.93601e-4
MA0019.1	MA0019.1	0.921
MA0024.1	MA0024.1	0.00605
MA0025.1	MA0025.1	0.295
MA0027.1	MA0027.1	0.827
MA0028.1	MA0028.1	0.0271
MA0029.1	MA0029.1	0.372
MA0030.1	MA0030.1	0.555
MA0031.1	MA0031.1	0.469
MA0035.2	MA0035.2	0.0305
MA0038.1	MA0038.1	0.18
MA0039.2	MA0039.2	0.604
MA0040.1	MA0040.1	0.183
MA0041.1	MA0041.1	0.302
MA0042.1	MA0042.1	0.539
MA0043.1	MA0043.1	0.00354
MA0046.1	MA0046.1	0.221
MA0047.2	MA0047.2	0.251
MA0048.1	MA0048.1	0.887
MA0050.1	MA0050.1	0.00144
MA0051.1	MA0051.1	0.172
MA0052.1	MA0052.1	0.181
MA0055.1	MA0055.1	0.622
MA0057.1	MA0057.1	0.236
MA0058.1	MA0058.1	0.74
MA0059.1	MA0059.1	0.675
MA0060.1	MA0060.1	0.441
MA0061.1	MA0061.1	0.238
MA0062.2	MA0062.2	6.61063e-5
MA0065.2	MA0065.2	0.183
MA0066.1	MA0066.1	0.145
MA0067.1	MA0067.1	0.00519
MA0068.1	MA0068.1	0.622
MA0069.1	MA0069.1	0.727
MA0070.1	MA0070.1	0.107
MA0071.1	MA0071.1	0.129
MA0072.1	MA0072.1	0.964
MA0073.1	MA0073.1	0.893
MA0074.1	MA0074.1	0.294
MA0076.1	MA0076.1	0.00104
MA0077.1	MA0077.1	0.605
MA0078.1	MA0078.1	0.221
MA0079.2	MA0079.2	0.958
MA0080.2	MA0080.2	0.15
MA0081.1	MA0081.1	0.174
MA0083.1	MA0083.1	6.49776e-6
MA0084.1	MA0084.1	0.513
MA0087.1	MA0087.1	0.828
MA0088.1	MA0088.1	0.332
MA0090.1	MA0090.1	0.00352
MA0091.1	MA0091.1	0.0347
MA0092.1	MA0092.1	0.145
MA0093.1	MA0093.1	0.93
MA0099.2	MA0099.2	1.6523e-9
MA0100.1	MA0100.1	0.66
MA0101.1	MA0101.1	0.489
MA0102.2	MA0102.2	0.0144
MA0103.1	MA0103.1	0.523
MA0104.2	MA0104.2	0.934
MA0105.1	MA0105.1	0.163
MA0106.1	MA0106.1	0.0514
MA0107.1	MA0107.1	0.277
MA0108.2	MA0108.2	0.00293
MA0111.1	MA0111.1	0.641
MA0112.2	MA0112.2	0.00116
MA0113.1	MA0113.1	0.00524
MA0114.1	MA0114.1	0.305
MA0115.1	MA0115.1	0.281
MA0116.1	MA0116.1	0.162
MA0117.1	MA0117.1	0.452
MA0119.1	MA0119.1	0.0346
MA0122.1	MA0122.1	0.886
MA0124.1	MA0124.1	0.407
MA0125.1	MA0125.1	0.494
MA0131.1	MA0131.1	0.248
MA0135.1	MA0135.1	0.216
MA0136.1	MA0136.1	0.0686
MA0137.2	MA0137.2	0.183
MA0138.2	MA0138.2	0.366
MA0139.1	MA0139.1	0.791
MA0140.1	MA0140.1	0.0246
MA0141.1	MA0141.1	0.0775
MA0142.1	MA0142.1	0.851
MA0143.1	MA0143.1	0.642
MA0144.1	MA0144.1	0.8
MA0145.1	MA0145.1	0.136
MA0146.1	MA0146.1	0.137
MA0147.1	MA0147.1	0.721
MA0148.1	MA0148.1	0.275
MA0149.1	MA0149.1	0.798
MA0150.1	MA0150.1	0.203
MA0152.1	MA0152.1	0.435
MA0153.1	MA0153.1	0.184
MA0154.1	MA0154.1	0.0308
MA0155.1	MA0155.1	0.134
MA0156.1	MA0156.1	0.0313
MA0157.1	MA0157.1	0.637
MA0159.1	MA0159.1	0.652
MA0160.1	MA0160.1	0.151
MA0162.1	MA0162.1	0.203
MA0163.1	MA0163.1	0.0612
MA0164.1	MA0164.1	0.516
MA0258.1	MA0258.1	0.0143
MA0259.1	MA0259.1	0.76

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11322

Novel motif	Logo	P-value
1	1	0.679
10	10	0.803
100	100	0.861
101	101	0.996
102	102	0.678
103	103	0.118
104	104	0.539
105	105	0.0186
106	106	0.115
107	107	0.0849
108	108	0.604
109	109	0.134
11	11	0.0426
110	110	0.142
111	111	0.408
112	112	0.44
113	113	0.632
114	114	0.159
115	115	0.434
116	116	0.31
117	117	0.966
118	118	0.828
119	119	0.237
12	12	0.416
120	120	0.674
121	121	0.479
122	122	0.268
123	123	0.07
124	124	0.457
125	125	0.422
126	126	0.99
127	127	0.623
128	128	0.249
129	129	0.267
13	13	0.654
130	130	0.0427
131	131	0.463
132	132	0.648
133	133	0.61
134	134	0.0415
135	135	0.155
136	136	0.283
137	137	0.514
138	138	0.396
139	139	0.775
14	14	0.967
140	140	0.673
141	141	0.564
142	142	0.877
143	143	0.00667
144	144	0.937
145	145	0.286
146	146	0.0738
147	147	0.196
148	148	0.393
149	149	0.0507
15	15	0.27
150	150	0.402
151	151	0.424
152	152	0.146
153	153	0.931
154	154	0.478
155	155	0.463
156	156	0.448
157	157	0.0362
158	158	0.369
159	159	0.953
16	16	0.146
160	160	0.0148
161	161	0.512
162	162	0.407
163	163	0.776
164	164	0.962
165	165	0.185
166	166	0.327
167	167	0.207
168	168	0.548
169	169	0.0245
17	17	0.117
18	18	0.0315
19	19	0.0953
2	2	0.176
20	20	0.238
21	21	0.628
22	22	0.109
23	23	0.0937
24	24	0.224
25	25	0.665
26	26	0.141
27	27	0.194
28	28	0.375
29	29	0.85
3	3	0.638
30	30	0.175
31	31	0.482
32	32	7.2753e-5
33	33	0.555
34	34	0.0775
35	35	0.991
36	36	0.976
37	37	0.372
38	38	0.243
39	39	0.208
4	4	0.266
40	40	0.0888
41	41	0.698
42	42	0.658
43	43	0.18
44	44	0.555
45	45	0.265
46	46	0.117
47	47	0.442
48	48	0.185
49	49	0.198
5	5	0.623
50	50	0.244
51	51	0.454
52	52	0.52
53	53	0.986
54	54	0.542
55	55	0.416
56	56	0.306
57	57	0.321
58	58	0.985
59	59	0.0253
6	6	0.758
60	60	0.323
61	61	0.441
62	62	0.897
63	63	0.15
64	64	0.177
65	65	0.0473
66	66	0.308
67	67	0.901
68	68	0.0108
69	69	0.269
7	7	0.741
70	70	0.445
71	71	0.179
72	72	0.753
73	73	0.178
74	74	0.461
75	75	0.714
76	76	0.241
77	77	0.032
78	78	0.92
79	79	0.395
8	8	0.0693
80	80	0.0923
81	81	0.601
82	82	0.496
83	83	0.579
84	84	0.38
85	85	0.338
86	86	0.824
87	87	0.467
88	88	0.214
89	89	0.159
9	9	0.0807
90	90	0.202
91	91	0.0516
92	92	0.208
93	93	0.398
94	94	0.159
95	95	0.98
96	96	0.376
97	97	0.248
98	98	0.235
99	99	0.0298

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11322

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000065 human fibroblast of lymphatic vessel sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002554 (fibroblast of lymphatic vessel)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000065 (human fibroblast of lymphatic vessel sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!2.06!113.77!HOXC5;;chr11:46299199..46299233,+!p1@CREB3L1!1.77!284.88!CREB3L1;;chr5:92918919..92918942,+!p1@NR2F1!1.76!243.01!NR2F1;;chr12:54402745..54402788,+!p1@HOXC8!1.69!48.24!HOXC8;;chr16:86544113..86544145,+!p1@FOXF1!1.64!52.79!FOXF1;;chr6:134210243..134210257,+!p1@TCF21!1.60!39.14!TCF21;;chr9:77112244..77112262,+!p1@RORB!1.56!39.14!RORB;;chr11:46299539..46299620,+!p2@CREB3L1!1.53!54.61!CREB3L1;;chr18:19749541..19749557,+!p1@GATA6!1.52!97.39!GATA6;;chr20:42543441..42543497,+!p1@TOX2!1.48!125.60!TOX2;;chr12:54378923..54378966,+!p1@HOXC10!1.48!29.13!HOXC10;;chr4:174451370..174451387,-!p1@HAND2!1.45!27.30!HAND2;;chr6:34204921..34204939,+!p3@HMGA1!1.40!690.81!HMGA1;;chr17:46682321..46682362,-!p1@HOXB6!1.38!22.75!HOXB6;;chr15:96874012..96874042,+!p2@NR2F2!1.37!193.86!NR2F2;;chr17:41622765..41622821,-!p2@ETV4!1.37!33.68!ETV4;;chr8:49833948..49833973,-!p2@SNAI2!1.36!134.70!SNAI2;;chr19:46801639..46801699,+!p1@HIF3A!1.36!21.84!HIF3A;;chr20:42543506..42543549,+!p2@TOX2!1.35!50.06!TOX2;;chr12:54380404..54380433,+!p3@HOXC10!1.34!20.93!HOXC10;;chr4:174450089..174450153,-!p2@HAND2!1.34!20.93!HAND2;;chr18:19749386..19749404,+!p2@GATA6!1.33!29.13!GATA6;;chr19:45261550..45261641,+!p6@BCL3!1.31!31.86!BCL3;;chr5:137801160..137801176,+!p1@EGR1!1.28!1738.41!EGR1;;chr12:54380036..54380091,+!p4@HOXC10!1.26!17.29!HOXC10;;chr12:54393880..54393962,+!p1@HOXC9!1.26!17.29!HOXC9;;chr15:96873984..96873999,+!p3@NR2F2!1.24!119.23!NR2F2;;chr5:92918768..92918783,+!p8@NR2F1!1.24!16.38!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!1.22!17.29!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!1.21!40.96!OSR1;;chr19:50432453..50432468,+!p1@ATF5!1.20!809.13!ATF5;;chr17:46675420..46675465,-!p3@HOXB6!1.20!17.29!HOXB6;;chr2:121493425..121493474,+!p1@GLI2!1.19!31.86!GLI2;;chr2:176994408..176994492,+!p1@HOXD8!1.19!14.56!HOXD8;;chr15:67430351..67430366,+!p10@SMAD3!1.19!14.56!SMAD3;;chr17:41622925..41622976,-!p3@ETV4!1.18!20.93!ETV4;;chr15:96874145..96874166,+!p7@NR2F2!1.17!26.39!NR2F2;;chr7:27205136..27205164,-!p1@HOXA9!1.17!13.65!HOXA9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.14!12.74!HOXC5;;chr15:96873921..96873946,+!p1@NR2F2!1.13!344.95!NR2F2;;chr15:96874244..96874259,+!p5@NR2F2!1.13!30.04!NR2F2;;chr5:92919068..92919082,+!p5@NR2F1!1.12!14.56!NR2F1;;chr12:54379029..54379057,+!p2@HOXC10!1.11!11.83!HOXC10;;chr2:119604456..119604501,-!p2@EN1!1.11!11.83!EN1;;chr8:49833978..49833996,-!p1@SNAI2!1.10!240.28!SNAI2;;chr8:22550982..22550999,-!p1@EGR3!1.10!32.77!EGR3;;chr11:65686802..65686818,+!p6@DRAP1!1.08!19.11!DRAP1;;chr10:101292684..101292706,+!p1@NKX2-3!1.08!10.92!NKX2-3;;chr11:65686732..65686756,+!p2@DRAP1!1.07!45.51!DRAP1;;chr19:45260775..45260838,+!p5@BCL3!1.06!13.65!BCL3;;chr1:8483878..8483907,-!p4@RERE!1.05!40.05!RERE;;chr6:34204672..34204692,+!p1@HMGA1!1.04!1122.23!HMGA1;;chr5:92918894..92918912,+!p2@NR2F1!1.04!32.77!NR2F1;;chr15:37390850..37390909,-!p3@MEIS2!1.04!20.02!MEIS2;;chr8:25902876..25902936,-!p1@EBF2!1.04!10.01!EBF2;;chr12:54410948..54410992,+!p3@HOXC5!1.04!10.01!HOXC5;;chr11:65667846..65667868,-!p1@FOSL1!1.03!258.49!FOSL1;;chr17:46622070..46622109,-!p1@HOXB2!1.03!21.84!HOXB2;;chr15:96874927..96874938,+!p8@NR2F2!1.03!20.93!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!1.03!13.65!HOXB7;;chr17:41623009..41623053,-!p4@ETV4!1.02!15.47!ETV4;;chr17:1959369..1959388,+!p2@HIC1!1.01!24.57!HIC1;;chr5:92919100..92919135,+!p3@NR2F1!1.00!10.92!NR2F1;;chr7:27196267..27196311,-!p1@HOXA7!1.00!9.10!HOXA7;;chr11:46299443..46299459,+!p4@CREB3L1!1.00!9.10!CREB3L1;;chr12:54378984..54378996,+!p7@HOXC10!1.00!9.10!HOXC10;;chr12:54402729..54402743,+!p3@HOXC8!1.00!9.10!HOXC8;;chr12:54422217..54422239,+!p3@HOXC6!1.00!9.10!HOXC6;;chr11:61520075..61520136,+!p1@C11orf9!0.99!19.11!C11orf9;;chr17:41622834..41622883,-!p6@ETV4!0.96!10.01!ETV4;;chr17:41622731..41622764,-!p5@ETV4!0.96!8.19!ETV4;;chr12:54380112..54380126,+!p5@HOXC10!0.96!8.19!HOXC10;;chr12:54402790..54402805,+!p2@HOXC8!0.96!8.19!HOXC8;;chr15:96873861..96873872,+!p9@NR2F2!0.94!16.38!NR2F2;;chr10:8096631..8096660,+!p1@GATA3!0.93!9.10!GATA3;;chr12:54394309..54394336,+!p2@HOXC9!0.92!7.28!HOXC9;;chr17:46675558..46675577,-!p2@HOXB6!0.92!7.28!HOXB6;;chr17:46690839..46690884,-!p1@HOXB8!0.92!7.28!HOXB8;;chr17:46703687..46703740,-!p1@HOXB9!0.92!7.28!HOXB9;;chr12:115121962..115121987,-!p1@TBX3!0.91!62.80!TBX3;;chr7:42276787..42276815,-!p1@GLI3!0.90!19.11!GLI3;;chr17:46622205..46622218,-!p3@HOXB2!0.90!8.19!HOXB2;;chr21:47063625..47063658,+!p1@PCBP3!0.89!30.95!PCBP3;;chr9:130954041..130954121,-!p2@CIZ1!0.89!30.95!CIZ1;;chr12:124873357..124873401,-!p1@NCOR2!0.88!80.09!NCOR2;;chr19:3366625..3366629,+!p4@NFIC!0.88!10.01!NFIC;;chr5:92918860..92918871,+!p10@NR2F1!0.88!7.28!NR2F1;;chr5:92918956..92918969,+!p4@NR2F1!0.88!7.28!NR2F1;;chr19:3366570..3366619,+!p1@NFIC!0.87!215.71!NFIC;;chr11:65687362..65687436,+!p3@DRAP1!0.87!30.95!DRAP1;;chr17:46621937..46621966,-!p2@HOXB2!0.87!18.20!HOXB2;;chr12:54379136..54379150,+!p4@HOXC5!0.87!6.37!HOXC5;;chr1:40105299..40105326,-!p1@HEYL!0.87!6.37!HEYL;;chr2:177001290..177001315,+!p1@HOXD3!0.87!6.37!HOXD3;;chr6:34204642..34204664,+!p2@HMGA1!0.86!898.33!HMGA1;;chr1:204042233..204042249,+!p1@SOX13!0.86!41.87!SOX13;;chr12:2986206..2986258,-!p2@FOXM1!0.86!40.05!FOXM1;;chr15:37391588..37391604,-!p11@MEIS2!0.86!8.19!MEIS2;;chr19:3359591..3359667,+!p2@NFIC!0.85!73.72!NFIC;;chr11:47279504..47279563,+!p1@NR1H3!0.85!14.56!NR1H3;;chr17:41623075..41623101,-!p9@ETV4!0.85!7.28!ETV4;;chr12:53614115..53614154,-!p1@RARG!0.84!33.68!RARG;;chr22:42229246..42229270,+!p2@SREBF2!0.83!78.27!SREBF2;;chr10:114710244..114710257,+!p3@TCF7L2!0.83!16.38!TCF7L2;;chr3:126076264..126076305,-!p2@KLF15!0.83!8.19!KLF15;;chr19:13106214..13106382,+!p1@NFIX!0.82!139.25!NFIX;;chr15:96874063..96874074,+!p10@NR2F2!0.82!10.92!NR2F2;;chr2:239756739..239756755,+!p2@TWIST2!0.82!10.01!TWIST2;;chr6:45390002..45390023,+!p6@RUNX2!0.82!10.01!RUNX2;;chr1:8484294..8484307,-!p16@RERE!0.82!9.10!RERE;;chr8:128748308..128748324,+!p2@MYC!0.81!164.74!MYC;;chr7:100076723..100076737,-!p3@TSC22D4!0.81!9.10!TSC22D4;;chr2:176987441..176987454,+!p1@HOXD9!0.81!5.46!HOXD9;;chr17:46132044..46132080,+!p4@NFE2L1!0.81!5.46!NFE2L1;;chr17:46671504..46671541,-!p2@HOXB5!0.81!5.46!HOXB5;;chr17:46675469..46675481,-!p4@HOXB6!0.81!5.46!HOXB6;;chr18:19749353..19749367,+!p4@GATA6!0.81!5.46!GATA6;;chr10:131762504..131762555,-!p1@EBF3!0.81!5.46!EBF3;;chr12:54394059..54394088,+!p3@HOXC9!0.81!5.46!HOXC9;;chr14:29234581..29234601,+!p2@FOXG1!0.81!5.46!FOXG1;;chr8:37553261..37553282,+!p2@ZNF703!0.80!43.69!ZNF703;;chr17:1958388..1958404,+!p1@HIC1!0.79!35.50!HIC1;;chr17:41623692..41623715,-!p1@ETV4!0.79!23.66!ETV4;;chr15:96869114..96869160,+!p11@NR2F2!0.79!7.28!NR2F2;;chr14:75894714..75894733,+!p1@JDP2!0.78!156.55!JDP2;;chr3:185826855..185826911,-!p1@ETV5!0.78!151.09!ETV5;;chr1:8585945..8586056,-!p3@RERE!0.78!18.20!RERE;;chr6:45390025..45390076,+!p2@RUNX2!0.78!12.74!RUNX2;;chr15:96874216..96874236,+!p13@NR2F2!0.78!8.19!NR2F2;;chr12:54447599..54447630,+!p3@HOXC4!0.78!6.37!HOXC4;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.77!53.70!GLIS2;;chr15:96876966..96877017,+!p12@NR2F2!0.77!7.28!NR2F2;;chr17:7387524..7387597,-!p1@ZBTB4!0.76!50.06!ZBTB4;;chr9:35732647..35732678,+!p2@CREB3!0.75!28.22!CREB3;;chr1:8484142..8484232,-!p10@RERE!0.75!13.65!RERE;;chr8:72756063..72756125,-!p1@MSC!0.75!10.01!MSC;;chr21:36260773..36260804,-!p7@RUNX1!0.75!6.37!RUNX1;;chr5:92920456..92920488,+!p9@NR2F1!0.75!5.46!NR2F1;;chr8:37553292..37553317,+!p1@ZNF703!0.74!118.32!ZNF703;;chr1:221052840..221052875,+!p4@HLX!0.74!5.46!HLX;;chr5:92920719..92920744,+!p17@NR2F1,p31@NR2F2!0.74!4.55!NR2F1;;chr7:15726243..15726293,-!p2@MEOX2!0.74!4.55!MEOX2;;chr7:27205106..27205134,-!p2@HOXA9!0.74!4.55!HOXA9;;chr11:125034605..125034636,+!p2@PKNOX2!0.74!4.55!PKNOX2;;chr11:65668011..65668020,-!p3@FOSL1!0.74!4.55!FOSL1;;chr14:29235961..29236008,+!p1@FOXG1!0.74!4.55!FOXG1;;chr17:46692318..46692362,-!p5@HOXB8!0.74!4.55!HOXB8;;chr6:34204973..34204990,+!p4@HMGA1!0.73!65.53!HMGA1;;chr2:239756671..239756732,+!p1@TWIST2!0.73!15.47!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!0.73!12.74!HMGA2;;chr18:19749517..19749531,+!p3@GATA6!0.73!8.19!GATA6;;chr19:13134457..13134462,+!p5@NFIX!0.73!8.19!NFIX;;chr1:221052776..221052799,+!p1@HLX!0.72!8.19!HLX;;chr1:8483849..8483868,-!p14@RERE!0.72!7.28!RERE;;chr11:113930425..113930471,+!p1@ZBTB16!0.72!6.37!ZBTB16;;chr3:126076242..126076257,-!p1@KLF15!0.72!5.46!KLF15;;chr20:39946361..39946379,-!p2@ZHX3!0.71!13.65!ZHX3;;chr19:19516507..19516539,+!p7@GATAD2A!0.71!13.65!GATAD2A;;chr8:106330656..106330684,+!p1@ZFPM2!0.71!11.83!ZFPM2;;chr6:42419290..42419314,-!p5@TRERF1!0.71!5.46!TRERF1;;chr7:100076744..100076749,-!p8@TSC22D4!0.71!4.55!TSC22D4;;chr6:31126291..31126399,+!p1@TCF19!0.70!42.78!TCF19;;chr17:46622440..46622477,-!p5@HOXB2!0.70!4.55!HOXB2;;chr11:65430586..65430593,-!p5@RELA!0.70!4.55!RELA;;chr3:187463248..187463264,-!p1@BCL6!0.69!94.66!BCL6;;chr12:77459306..77459365,-!p1@E2F7!0.69!55.52!E2F7;;chr3:185826764..185826803,-!p2@ETV5!0.69!16.38!ETV5;;chr17:38498594..38498661,+!p2@RARA!0.69!14.56!RARA;;chr15:83953397..83953425,-!p1@BNC1!0.69!4.55!BNC1;;chr11:47279248..47279264,+!p3@NR1H3!0.69!4.55!NR1H3;;chr8:128748470..128748487,+!p1@MYC!0.68!479.66!MYC;;chrX:47509928..47509990,-!p1@ELK1!0.68!134.70!ELK1;;chr15:37390482..37390572,-!p7@MEIS2!0.68!5.46!MEIS2;;chr15:96869222..96869251,+!p18@NR2F2!0.68!4.55!NR2F2;;chr15:96869255..96869291,+!p6@NR2F2!0.67!7.28!NR2F2;;chr15:80843484..80843499,+!p5@ARNT2!0.67!3.64!ARNT2;;chr16:31076332..31076388,-!p3@ZNF668!0.67!3.64!ZNF668;;chr17:41623716..41623727,-!p12@ETV4!0.67!3.64!ETV4;;chr17:46659728..46659749,-!p3@HOXB3!0.67!3.64!HOXB3;;chr17:46667628..46667642,-!p2@HOXB3!0.67!3.64!HOXB3;;chr17:46675586..46675600,-!p6@HOXB6!0.67!3.64!HOXB6;;chr17:46691732..46691766,-!p4@HOXB8!0.67!3.64!HOXB8;;chr17:46692624..46692659,-!p3@HOXB8!0.67!3.64!HOXB8;;chr17:59477403..59477414,+!p4@TBX2!0.67!3.64!TBX2;;chr18:19749504..19749515,+!p5@GATA6!0.67!3.64!GATA6;;chr12:54378864..54378884,+!p6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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11506-119G3: Difference between revisions

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Revision as of 21:15, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0