FFCP PHASE1:Mm9::chr8:72758300..72758358,-: Difference between revisions
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|id=chr8:72758300..72758358,- | |id=chr8:72758300..72758358,- | ||
|ontology_enrichment_celltype=CL:0000055!2.75e-25!50;CL:0000221!4.81e-23!44;CL:0000133!4.81e-23!44;CL:0002319!8.88e-23!43;CL:0000393!4.56e-19!39;CL:0000211!4.56e-19!39;CL:0000540!5.98e-17!33;CL:0000047!5.98e-17!33;CL:0000031!5.98e-17!33;CL:0000404!5.98e-17!33;CL:0002321!8.71e-17!70;CL:0000220!8.71e-17!70;CL:0000117!6.75e-12!23;CL:0000337!6.75e-12!23;CL:0000548!1.38e-09!115;CL:0000004!1.38e-09!115;CL:0000255!1.38e-09!115;CL:0000723!9.76e-09!91;CL:0000048!9.76e-09!91;CL:0002371!1.17e-08!118;CL:0000144!2.00e-07!121;CL:0000012!2.00e-07!121 | |ontology_enrichment_celltype=CL:0000055!2.75e-25!50;CL:0000221!4.81e-23!44;CL:0000133!4.81e-23!44;CL:0002319!8.88e-23!43;CL:0000393!4.56e-19!39;CL:0000211!4.56e-19!39;CL:0000540!5.98e-17!33;CL:0000047!5.98e-17!33;CL:0000031!5.98e-17!33;CL:0000404!5.98e-17!33;CL:0002321!8.71e-17!70;CL:0000220!8.71e-17!70;CL:0000117!6.75e-12!23;CL:0000337!6.75e-12!23;CL:0000548!1.38e-09!115;CL:0000004!1.38e-09!115;CL:0000255!1.38e-09!115;CL:0000723!9.76e-09!91;CL:0000048!9.76e-09!91;CL:0002371!1.17e-08!118;CL:0000144!2.00e-07!121;CL:0000012!2.00e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.81e-23,44;CL:0000133,4.81e-23,44;CL:0002319,8.88e-23,43;CL:0000393,4.56e-19,39;CL:0000211,4.56e-19,39;CL:0000540,5.98e-17,33;CL:0000047,5.98e-17,33;CL:0000031,5.98e-17,33;CL:0000404,5.98e-17,33;CL:0002321,8.62e-17,70;CL:0000117,6.75e-12,23;CL:0000337,6.75e-12,23;CL:0000723,9.82e-09,91;CL:0000048,9.82e-09,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.70e-16!75;UBERON:0001016!3.70e-16!75;UBERON:0001017!2.47e-15!73;UBERON:0005743!2.47e-15!73;UBERON:0004121!1.34e-10!102;UBERON:0000924!1.34e-10!102;UBERON:0006601!1.34e-10!102;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0000010!3.77e-07!11;UBERON:0001049!9.29e-07!52;UBERON:0005068!9.29e-07!52;UBERON:0006241!9.29e-07!52;UBERON:0007135!9.29e-07!52 | |ontology_enrichment_uberon=UBERON:0000073!3.70e-16!75;UBERON:0001016!3.70e-16!75;UBERON:0001017!2.47e-15!73;UBERON:0005743!2.47e-15!73;UBERON:0004121!1.34e-10!102;UBERON:0000924!1.34e-10!102;UBERON:0006601!1.34e-10!102;UBERON:0002346!1.74e-07!71;UBERON:0003075!1.74e-07!71;UBERON:0007284!1.74e-07!71;UBERON:0000010!3.77e-07!11;UBERON:0001049!9.29e-07!52;UBERON:0005068!9.29e-07!52;UBERON:0006241!9.29e-07!52;UBERON:0007135!9.29e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.70e-16,75;UBERON:0001017,2.47e-15,73;UBERON:0004121,1.86e-11,95;UBERON:0000924,1.86e-11,95;UBERON:0006601,1.86e-11,95;UBERON:0002346,2.11e-08,64;UBERON:0003075,2.11e-08,64;UBERON:0007284,2.11e-08,64;UBERON:0010314,3.48e-08,92;UBERON:0000073,6.89e-08,54;UBERON:0000010,3.77e-07,11;UBERON:0001049,9.29e-07,52;UBERON:0005068,9.29e-07,52;UBERON:0006241,9.29e-07,52;UBERON:0007135,9.29e-07,52 | |||
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| ||
|short_description=p1@Armc6 | |short_description=p1@Armc6 | ||
}} | }} |
Revision as of 15:40, 13 November 2012
Short description: | p1@Armc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Armc6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000135931, NM_133972, uc009lzi.1, uc009lzj.1_5end |
EntrezGene: | Armc6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.81e-23 | 44 |
neurectodermal cell | 4.81e-23 | 44 |
neural cell | 8.88e-23 | 43 |
electrically responsive cell | 4.56e-19 | 39 |
electrically active cell | 4.56e-19 | 39 |
neuron | 5.98e-17 | 33 |
neuronal stem cell | 5.98e-17 | 33 |
neuroblast | 5.98e-17 | 33 |
electrically signaling cell | 5.98e-17 | 33 |
embryonic cell | 8.62e-17 | 70 |
CNS neuron (sensu Vertebrata) | 6.75e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.75e-12 | 23 |
somatic stem cell | 9.82e-09 | 91 |
multi fate stem cell | 9.82e-09 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.70e-16 | 75 |
central nervous system | 2.47e-15 | 73 |
ectoderm-derived structure | 1.86e-11 | 95 |
ectoderm | 1.86e-11 | 95 |
presumptive ectoderm | 1.86e-11 | 95 |
neurectoderm | 2.11e-08 | 64 |
neural plate | 2.11e-08 | 64 |
presumptive neural plate | 2.11e-08 | 64 |
structure with developmental contribution from neural crest | 3.48e-08 | 92 |
regional part of nervous system | 6.89e-08 | 54 |
peripheral nervous system | 3.77e-07 | 11 |
neural tube | 9.29e-07 | 52 |
neural rod | 9.29e-07 | 52 |
future spinal cord | 9.29e-07 | 52 |
neural keel | 9.29e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.