FFCP PHASE1:Hg19::chr12:66218923..66218934,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.35e-30!180;CL:0002321!1.38e-26!248;CL:0000220!2.91e-26!246;CL:0000680!1.83e-24!57;CL:0000056!1.83e-24!57;CL:0000355!1.83e-24!57;CL:0000183!1.54e-22!59;CL:0000187!2.37e-22!54;CL:0000393!9.53e-21!60;CL:0000211!9.53e-21!60;CL:0000192!1.27e-20!42;CL:0000514!1.27e-20!42;CL:0000012!3.29e-20!682;CL:0000222!1.28e-19!119;CL:0000548!3.06e-19!679;CL:0000004!3.06e-19!679;CL:0000255!3.06e-19!679;CL:0000359!5.35e-19!32;CL:0002371!1.78e-18!591;CL:0000144!1.75e-17!625;CL:0000003!2.47e-12!722;CL:0000057!3.28e-09!75;CL:0002539!2.24e-08!10;CL:0002494!4.32e-08!16 | |ontology_enrichment_celltype=CL:0000055!3.35e-30!180;CL:0002321!1.38e-26!248;CL:0000220!2.91e-26!246;CL:0000680!1.83e-24!57;CL:0000056!1.83e-24!57;CL:0000355!1.83e-24!57;CL:0000183!1.54e-22!59;CL:0000187!2.37e-22!54;CL:0000393!9.53e-21!60;CL:0000211!9.53e-21!60;CL:0000192!1.27e-20!42;CL:0000514!1.27e-20!42;CL:0000012!3.29e-20!682;CL:0000222!1.28e-19!119;CL:0000548!3.06e-19!679;CL:0000004!3.06e-19!679;CL:0000255!3.06e-19!679;CL:0000359!5.35e-19!32;CL:0002371!1.78e-18!591;CL:0000144!1.75e-17!625;CL:0000003!2.47e-12!722;CL:0000057!3.28e-09!75;CL:0002539!2.24e-08!10;CL:0002494!4.32e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-26;32!CL:0000192;3.80e-21;43!CL:0000187;2.13e-14;55!CL:0002539;7.56e-12;10!CL:0000393;6.61e-11;61!CL:0000211;6.61e-11;61!CL:0002494;1.40e-08;16 | |ontology_enrichment_celltype_v019=CL:0000359;1.49e-26;32!CL:0000192;3.80e-21;43!CL:0000187;2.13e-14;55!CL:0002539;7.56e-12;10!CL:0000393;6.61e-11;61!CL:0000211;6.61e-11;61!CL:0002494;1.40e-08;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.80e-30,58;CL:0000056,5.80e-30,58;CL:0000355,5.80e-30,58;CL:0000192,1.70e-29,43;CL:0000514,1.70e-29,43;CL:0000359,8.68e-29,32;CL:0000187,6.66e-27,55;CL:0000393,9.92e-23,61;CL:0000211,9.92e-23,61;CL:0000222,7.86e-15,121;CL:0002321,2.65e-14,250;CL:0002539,5.17e-12,10;CL:0002494,1.06e-08,16;CL:0000048,8.61e-08,427;CL:0000034,1.00e-07,441;CL:0000723,1.39e-07,433;CL:0002540,6.04e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;3.80e-21;43!CL:0000355;6.12e-16;58 | |ontology_enrichment_development_v019=CL:0000514;3.80e-21;43!CL:0000355;6.12e-16;58 | ||
|ontology_enrichment_disease=DOID:2394!7.03e-07!14 | |ontology_enrichment_disease=DOID:2394!7.03e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.42e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;2.42e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.43e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.19e-25!83;UBERON:0002329!2.19e-25!83;UBERON:0003077!2.19e-25!83;UBERON:0003059!2.19e-25!83;UBERON:0007282!2.19e-25!83;UBERON:0009618!2.19e-25!83;UBERON:0007285!2.19e-25!83;UBERON:0000486!4.66e-25!82;UBERON:0004290!1.52e-23!70;UBERON:0001134!3.76e-21!61;UBERON:0002036!3.76e-21!61;UBERON:0003082!3.76e-21!61;UBERON:0002049!4.52e-20!79;UBERON:0007798!4.52e-20!79;UBERON:0002385!1.12e-19!63;UBERON:0001015!1.12e-19!63;UBERON:0000383!1.12e-19!63;UBERON:0001637!6.51e-19!42;UBERON:0003509!6.51e-19!42;UBERON:0004572!6.51e-19!42;UBERON:0005256!4.09e-17!143;UBERON:0001981!1.00e-16!60;UBERON:0007500!1.00e-16!60;UBERON:0004537!1.00e-16!60;UBERON:0006965!1.00e-16!60;UBERON:0000055!1.06e-16!69;UBERON:0000490!1.41e-16!138;UBERON:0004872!2.11e-16!84;UBERON:0004535!6.14e-16!110;UBERON:0004573!3.74e-15!33;UBERON:0004571!3.74e-15!33;UBERON:0001009!1.02e-14!113;UBERON:0003914!1.78e-14!118;UBERON:0002100!1.39e-11!216;UBERON:0000119!3.02e-11!312;UBERON:0000483!1.20e-10!309;UBERON:0003104!2.69e-10!238;UBERON:0009142!2.69e-10!238;UBERON:0000947!1.50e-09!21;UBERON:0010191!1.50e-09!21;UBERON:0000481!1.09e-08!347;UBERON:0000475!1.20e-08!365;UBERON:0004237!2.24e-08!10;UBERON:0004695!2.24e-08!10;UBERON:0002111!2.24e-08!10;UBERON:0004178!2.24e-08!10;UBERON:0000468!9.72e-08!659;UBERON:0003102!2.74e-07!95;UBERON:0000926!3.23e-07!448;UBERON:0004120!3.23e-07!448;UBERON:0006603!3.23e-07!448;UBERON:0000922!4.80e-07!612;UBERON:0000467!4.96e-07!625;UBERON:0000480!6.66e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!2.19e-25!83;UBERON:0002329!2.19e-25!83;UBERON:0003077!2.19e-25!83;UBERON:0003059!2.19e-25!83;UBERON:0007282!2.19e-25!83;UBERON:0009618!2.19e-25!83;UBERON:0007285!2.19e-25!83;UBERON:0000486!4.66e-25!82;UBERON:0004290!1.52e-23!70;UBERON:0001134!3.76e-21!61;UBERON:0002036!3.76e-21!61;UBERON:0003082!3.76e-21!61;UBERON:0002049!4.52e-20!79;UBERON:0007798!4.52e-20!79;UBERON:0002385!1.12e-19!63;UBERON:0001015!1.12e-19!63;UBERON:0000383!1.12e-19!63;UBERON:0001637!6.51e-19!42;UBERON:0003509!6.51e-19!42;UBERON:0004572!6.51e-19!42;UBERON:0005256!4.09e-17!143;UBERON:0001981!1.00e-16!60;UBERON:0007500!1.00e-16!60;UBERON:0004537!1.00e-16!60;UBERON:0006965!1.00e-16!60;UBERON:0000055!1.06e-16!69;UBERON:0000490!1.41e-16!138;UBERON:0004872!2.11e-16!84;UBERON:0004535!6.14e-16!110;UBERON:0004573!3.74e-15!33;UBERON:0004571!3.74e-15!33;UBERON:0001009!1.02e-14!113;UBERON:0003914!1.78e-14!118;UBERON:0002100!1.39e-11!216;UBERON:0000119!3.02e-11!312;UBERON:0000483!1.20e-10!309;UBERON:0003104!2.69e-10!238;UBERON:0009142!2.69e-10!238;UBERON:0000947!1.50e-09!21;UBERON:0010191!1.50e-09!21;UBERON:0000481!1.09e-08!347;UBERON:0000475!1.20e-08!365;UBERON:0004237!2.24e-08!10;UBERON:0004695!2.24e-08!10;UBERON:0002111!2.24e-08!10;UBERON:0004178!2.24e-08!10;UBERON:0000468!9.72e-08!659;UBERON:0003102!2.74e-07!95;UBERON:0000926!3.23e-07!448;UBERON:0004120!3.23e-07!448;UBERON:0006603!3.23e-07!448;UBERON:0000922!4.80e-07!612;UBERON:0000467!4.96e-07!625;UBERON:0000480!6.66e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.71e-18;33!UBERON:0004571;3.71e-18;33!UBERON:0001637;9.20e-16;42!UBERON:0003509;9.20e-16;42!UBERON:0004572;9.20e-16;42!UBERON:0004237;7.56e-12;10!UBERON:0004695;7.56e-12;10!UBERON:0002111;7.56e-12;10!UBERON:0004178;7.56e-12;10!UBERON:0000947;2.88e-11;21!UBERON:0010191;2.88e-11;21!UBERON:0007500;5.14e-11;56!UBERON:0001981;5.14e-11;56!UBERON:0004537;5.14e-11;56!UBERON:0002049;2.33e-09;75!UBERON:0007798;2.33e-09;75!UBERON:0001135;2.69e-08;15!UBERON:0000055;5.31e-08;65!UBERON:0002385;6.74e-08;31!UBERON:0001015;6.74e-08;31!UBERON:0000383;6.74e-08;31!UBERON:0004765;1.93e-07;26!UBERON:0003914;4.80e-07;74!UBERON:0000992;8.12e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0004573;3.71e-18;33!UBERON:0004571;3.71e-18;33!UBERON:0001637;9.20e-16;42!UBERON:0003509;9.20e-16;42!UBERON:0004572;9.20e-16;42!UBERON:0004237;7.56e-12;10!UBERON:0004695;7.56e-12;10!UBERON:0002111;7.56e-12;10!UBERON:0004178;7.56e-12;10!UBERON:0000947;2.88e-11;21!UBERON:0010191;2.88e-11;21!UBERON:0007500;5.14e-11;56!UBERON:0001981;5.14e-11;56!UBERON:0004537;5.14e-11;56!UBERON:0002049;2.33e-09;75!UBERON:0007798;2.33e-09;75!UBERON:0001135;2.69e-08;15!UBERON:0000055;5.31e-08;65!UBERON:0002385;6.74e-08;31!UBERON:0001015;6.74e-08;31!UBERON:0000383;6.74e-08;31!UBERON:0004765;1.93e-07;26!UBERON:0003914;4.80e-07;74!UBERON:0000992;8.12e-07;13 | ||
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| ||
|short_description=p14@HMGA2 | |short_description=p14@HMGA2 | ||
}} | }} |
Revision as of 15:12, 18 November 2012
Short description: | p14@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_HMGA2_5end |
Coexpression cluster: | C1682_schwannoma_Fibroblast_hepatoblastoma_Wilms_adrenal_Aortic_meningioma |
Association with transcript: | 20bp_to_ENST00000393577_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | F5H2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.80e-30 | 58 |
myoblast | 5.80e-30 | 58 |
multi-potent skeletal muscle stem cell | 5.80e-30 | 58 |
smooth muscle cell | 1.70e-29 | 43 |
smooth muscle myoblast | 1.70e-29 | 43 |
vascular associated smooth muscle cell | 8.68e-29 | 32 |
muscle cell | 6.66e-27 | 55 |
electrically responsive cell | 9.92e-23 | 61 |
electrically active cell | 9.92e-23 | 61 |
mesodermal cell | 7.86e-15 | 121 |
embryonic cell | 2.65e-14 | 250 |
aortic smooth muscle cell | 5.17e-12 | 10 |
cardiocyte | 1.06e-08 | 16 |
multi fate stem cell | 8.61e-08 | 427 |
stem cell | 1.00e-07 | 441 |
somatic stem cell | 1.39e-07 | 433 |
mesenchymal stem cell of the bone marrow | 6.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.43e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.