FFCP PHASE1:Hg19::chr12:47432458..47432475,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!2.25e-12!42;CL:0000860!3.42e-11!45;CL:0000839!7.39e-11!70;CL:0000557!1.30e-10!71;CL:0000766!2.24e-10!76;CL:1000507!4.94e-10!12;CL:1000494!4.94e-10!12;CL:0002194!4.41e-08!63;CL:0000576!4.41e-08!63;CL:0000040!4.41e-08!63;CL:0000559!4.41e-08!63;CL:1000497!7.42e-08!18;CL:0002518!7.42e-08!18;CL:0002009!1.13e-07!65;CL:0000763!1.58e-07!112;CL:0000049!1.58e-07!112;CL:0002274!1.93e-07!5;CL:0000457!1.93e-07!5;CL:0002191!1.93e-07!5;CL:0000097!1.93e-07!5;CL:0000831!1.93e-07!5;CL:0002028!1.93e-07!5;CL:0002541!4.14e-07!3;CL:1000449!4.27e-07!16 | |ontology_enrichment_celltype=CL:0002057!2.25e-12!42;CL:0000860!3.42e-11!45;CL:0000839!7.39e-11!70;CL:0000557!1.30e-10!71;CL:0000766!2.24e-10!76;CL:1000507!4.94e-10!12;CL:1000494!4.94e-10!12;CL:0002194!4.41e-08!63;CL:0000576!4.41e-08!63;CL:0000040!4.41e-08!63;CL:0000559!4.41e-08!63;CL:1000497!7.42e-08!18;CL:0002518!7.42e-08!18;CL:0002009!1.13e-07!65;CL:0000763!1.58e-07!112;CL:0000049!1.58e-07!112;CL:0002274!1.93e-07!5;CL:0000457!1.93e-07!5;CL:0002191!1.93e-07!5;CL:0000097!1.93e-07!5;CL:0000831!1.93e-07!5;CL:0002028!1.93e-07!5;CL:0002541!4.14e-07!3;CL:1000449!4.27e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000507;6.33e-17;10!CL:1000494;6.33e-17;10!CL:1000497;6.17e-14;17!CL:0002518;6.17e-14;17!CL:0000097;3.28e-13;5!CL:0000860;5.88e-13;33!CL:0002057;5.88e-13;33!CL:1000449;3.20e-11;15!CL:0002541;4.28e-10;3!CL:0000473;3.39e-09;39!CL:0000234;3.39e-09;39!CL:0000163;1.53e-07;9 | |ontology_enrichment_celltype_v019=CL:1000507;6.33e-17;10!CL:1000494;6.33e-17;10!CL:1000497;6.17e-14;17!CL:0002518;6.17e-14;17!CL:0000097;3.28e-13;5!CL:0000860;5.88e-13;33!CL:0002057;5.88e-13;33!CL:1000449;3.20e-11;15!CL:0002541;4.28e-10;3!CL:0000473;3.39e-09;39!CL:0000234;3.39e-09;39!CL:0000163;1.53e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.74e-17,10;CL:1000494,5.74e-17,10;CL:1000497,5.38e-14,17;CL:0002518,5.38e-14,17;CL:0000097,3.28e-13,5;CL:0002028,3.28e-13,5;CL:0000839,3.66e-12,66;CL:0000557,5.96e-12,67;CL:0000860,2.35e-11,42;CL:0002057,2.35e-11,42;CL:1000449,3.00e-11,15;CL:0000766,5.57e-11,72;CL:0002541,4.79e-10,3;CL:0000473,9.24e-10,48;CL:0000234,9.24e-10,48;CL:0000763,6.60e-08,108;CL:0000049,6.60e-08,108;CL:0000163,1.53e-07,9;CL:0002194,1.57e-07,59;CL:0000576,1.57e-07,59;CL:0000040,1.57e-07,59;CL:0000559,1.57e-07,59;CL:0002009,3.03e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.14e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.31e-13!44;UBERON:0001008!3.55e-13!45;UBERON:0009773!4.94e-10!12;UBERON:0001231!4.94e-10!12;UBERON:0004810!4.94e-10!12;UBERON:0000489!4.98e-10!32;UBERON:0000058!7.85e-09!26;UBERON:0002371!1.10e-08!80;UBERON:0006555!2.25e-08!17;UBERON:0005103!2.25e-08!17;UBERON:0000083!2.25e-08!17;UBERON:0009201!2.25e-08!17;UBERON:0004819!2.25e-08!17;UBERON:0006553!2.25e-08!17;UBERON:0003074!2.25e-08!17;UBERON:0003060!2.25e-08!17;UBERON:0002113!3.82e-08!27;UBERON:0003918!3.82e-08!27;UBERON:0005095!3.82e-08!27;UBERON:0007687!3.82e-08!27;UBERON:0003064!5.16e-08!37;UBERON:0000080!8.53e-08!18;UBERON:0002120!8.53e-08!18;UBERON:0004875!8.53e-08!18;UBERON:0005721!8.53e-08!18;UBERON:0005754!8.53e-08!18;UBERON:0007297!8.53e-08!18;UBERON:0003887!1.11e-07!21;UBERON:0001474!1.22e-07!86;UBERON:0000476!4.14e-07!3;UBERON:0000920!4.14e-07!3;UBERON:0004211!4.27e-07!16;UBERON:0001285!4.27e-07!16;UBERON:0007684!4.27e-07!16;UBERON:0003220!4.27e-07!16;UBERON:0004208!4.27e-07!16;UBERON:0002405!5.33e-07!115;UBERON:0004876!8.13e-07!20 | |ontology_enrichment_uberon=UBERON:0006554!1.31e-13!44;UBERON:0001008!3.55e-13!45;UBERON:0009773!4.94e-10!12;UBERON:0001231!4.94e-10!12;UBERON:0004810!4.94e-10!12;UBERON:0000489!4.98e-10!32;UBERON:0000058!7.85e-09!26;UBERON:0002371!1.10e-08!80;UBERON:0006555!2.25e-08!17;UBERON:0005103!2.25e-08!17;UBERON:0000083!2.25e-08!17;UBERON:0009201!2.25e-08!17;UBERON:0004819!2.25e-08!17;UBERON:0006553!2.25e-08!17;UBERON:0003074!2.25e-08!17;UBERON:0003060!2.25e-08!17;UBERON:0002113!3.82e-08!27;UBERON:0003918!3.82e-08!27;UBERON:0005095!3.82e-08!27;UBERON:0007687!3.82e-08!27;UBERON:0003064!5.16e-08!37;UBERON:0000080!8.53e-08!18;UBERON:0002120!8.53e-08!18;UBERON:0004875!8.53e-08!18;UBERON:0005721!8.53e-08!18;UBERON:0005754!8.53e-08!18;UBERON:0007297!8.53e-08!18;UBERON:0003887!1.11e-07!21;UBERON:0001474!1.22e-07!86;UBERON:0000476!4.14e-07!3;UBERON:0000920!4.14e-07!3;UBERON:0004211!4.27e-07!16;UBERON:0001285!4.27e-07!16;UBERON:0007684!4.27e-07!16;UBERON:0003220!4.27e-07!16;UBERON:0004208!4.27e-07!16;UBERON:0002405!5.33e-07!115;UBERON:0004876!8.13e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.33e-17;10!UBERON:0009773;6.33e-17;10!UBERON:0001231;6.33e-17;10!UBERON:0004810;6.33e-17;10!UBERON:0006555;3.20e-11;15!UBERON:0004819;3.20e-11;15!UBERON:0001285;3.20e-11;15!UBERON:0007684;3.20e-11;15!UBERON:0006554;2.56e-10;30!UBERON:0001008;2.56e-10;30!UBERON:0003124;4.28e-10;3!UBERON:0000920;4.28e-10;3!UBERON:0002113;1.03e-09;24!UBERON:0011143;1.03e-09;24!UBERON:0000489;6.05e-08;29!UBERON:0001301;8.12e-08;1!UBERON:0004913;8.12e-08;1!UBERON:0003703;8.12e-08;1!UBERON:0001174;8.12e-08;1!UBERON:0004914;8.12e-08;1!UBERON:0002394;2.07e-07;4!UBERON:0003928;2.07e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004211;6.33e-17;10!UBERON:0009773;6.33e-17;10!UBERON:0001231;6.33e-17;10!UBERON:0004810;6.33e-17;10!UBERON:0006555;3.20e-11;15!UBERON:0004819;3.20e-11;15!UBERON:0001285;3.20e-11;15!UBERON:0007684;3.20e-11;15!UBERON:0006554;2.56e-10;30!UBERON:0001008;2.56e-10;30!UBERON:0003124;4.28e-10;3!UBERON:0000920;4.28e-10;3!UBERON:0002113;1.03e-09;24!UBERON:0011143;1.03e-09;24!UBERON:0000489;6.05e-08;29!UBERON:0001301;8.12e-08;1!UBERON:0004913;8.12e-08;1!UBERON:0003703;8.12e-08;1!UBERON:0001174;8.12e-08;1!UBERON:0004914;8.12e-08;1!UBERON:0002394;2.07e-07;4!UBERON:0003928;2.07e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.74e-17,10;UBERON:0006555,9.87e-15,16;UBERON:0004819,9.87e-15,16;UBERON:0002113,6.07e-12,26;UBERON:0003918,6.07e-12,26;UBERON:0011143,6.07e-12,26;UBERON:0005095,6.07e-12,26;UBERON:0007687,6.07e-12,26;UBERON:0004211,3.00e-11,15;UBERON:0009773,3.00e-11,15;UBERON:0001231,3.00e-11,15;UBERON:0001285,3.00e-11,15;UBERON:0007684,3.00e-11,15;UBERON:0004208,3.00e-11,15;UBERON:0002371,2.70e-10,76;UBERON:0006554,3.30e-10,47;UBERON:0000920,4.79e-10,3;UBERON:0001008,5.77e-10,48;UBERON:0000489,7.01e-10,31;UBERON:0001474,2.16e-09,82;UBERON:0004765,2.24e-08,90;UBERON:0002405,4.87e-08,93;UBERON:0004913,7.10e-08,1;UBERON:0003703,7.10e-08,1;UBERON:0001174,7.10e-08,1;UBERON:0004914,7.10e-08,1;UBERON:0001301,9.94e-08,1;UBERON:0002390,1.59e-07,98;UBERON:0003061,1.59e-07,98;UBERON:0001434,2.48e-07,100 | |||
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| ||
|short_description=p@chr12:47432458..47432475,+ | |short_description=p@chr12:47432458..47432475,+ | ||
}} | }} |
Revision as of 02:47, 21 November 2012
Short description: | p@chr12:47432458..47432475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47432458..47432475, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.74e-17 | 10 |
nephron tubule epithelial cell | 5.74e-17 | 10 |
kidney cell | 5.38e-14 | 17 |
kidney epithelial cell | 5.38e-14 | 17 |
mast cell | 3.28e-13 | 5 |
basophil mast progenitor cell | 3.28e-13 | 5 |
myeloid lineage restricted progenitor cell | 3.66e-12 | 66 |
granulocyte monocyte progenitor cell | 5.96e-12 | 67 |
classical monocyte | 2.35e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-11 | 42 |
epithelial cell of nephron | 3.00e-11 | 15 |
myeloid leukocyte | 5.57e-11 | 72 |
chorionic membrane mesenchymal stem cell | 4.79e-10 | 3 |
defensive cell | 9.24e-10 | 48 |
phagocyte | 9.24e-10 | 48 |
myeloid cell | 6.60e-08 | 108 |
common myeloid progenitor | 6.60e-08 | 108 |
endocrine cell | 1.53e-07 | 9 |
monopoietic cell | 1.57e-07 | 59 |
monocyte | 1.57e-07 | 59 |
monoblast | 1.57e-07 | 59 |
promonocyte | 1.57e-07 | 59 |
macrophage dendritic cell progenitor | 3.03e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.74e-17 | 10 |
excretory tube | 9.87e-15 | 16 |
kidney epithelium | 9.87e-15 | 16 |
kidney | 6.07e-12 | 26 |
kidney mesenchyme | 6.07e-12 | 26 |
upper urinary tract | 6.07e-12 | 26 |
kidney rudiment | 6.07e-12 | 26 |
kidney field | 6.07e-12 | 26 |
nephron epithelium | 3.00e-11 | 15 |
renal tubule | 3.00e-11 | 15 |
nephron tubule | 3.00e-11 | 15 |
nephron | 3.00e-11 | 15 |
uriniferous tubule | 3.00e-11 | 15 |
nephrogenic mesenchyme | 3.00e-11 | 15 |
bone marrow | 2.70e-10 | 76 |
urinary system structure | 3.30e-10 | 47 |
egg chorion | 4.79e-10 | 3 |
renal system | 5.77e-10 | 48 |
cavitated compound organ | 7.01e-10 | 31 |
bone element | 2.16e-09 | 82 |
skeletal element | 2.24e-08 | 90 |
immune system | 4.87e-08 | 93 |
hepatopancreatic ampulla | 7.10e-08 | 1 |
extrahepatic bile duct | 7.10e-08 | 1 |
common bile duct | 7.10e-08 | 1 |
duodenal papilla | 7.10e-08 | 1 |
epididymis | 9.94e-08 | 1 |
hematopoietic system | 1.59e-07 | 98 |
blood island | 1.59e-07 | 98 |
skeletal system | 2.48e-07 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.