FFCP PHASE1:Hg19::chr10:106113320..106113338,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000435434_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_ENST00000435434_5end|id=chr10:106113320..106113338,-|ontology_enrichment_celltype=CL:0000766!8.07e-20!76;CL:0002057!2.83e-19!42;CL:0000839!7.05e-17!70;CL:0000860!9.30e-17!45;CL:0000557!1.22e-16!71;CL:0000763!4.00e-15!112;CL:0000049!4.00e-15!112;CL:0002009!5.32e-15!65;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000738!2.46e-11!140;CL:0002031!2.49e-10!124;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000037!2.69e-09!172;CL:0000566!2.69e-09!172;CL:0000988!1.11e-07!182;CL:0002087!1.74e-07!119|ontology_enrichment_celltype_v019=CL:0000860;8.49e-36;33!CL:0002057;8.49e-36;33!CL:0000473;1.32e-26;39!CL:0000234;1.32e-26;39!CL:0000576;1.96e-19;48!CL:0000766;5.60e-17;69!CL:0000094;3.25e-15;8!CL:0000081;1.02e-10;11!CL:0000775;6.07e-09;3!CL:0000763;1.07e-07;100|ontology_enrichment_celltype_v019_2=CL:0000766,5.81e-38,72;CL:0000860,2.32e-37,42;CL:0002057,2.32e-37,42;CL:0000473,2.95e-34,48;CL:0000234,2.95e-34,48;CL:0000557,1.38e-29,67;CL:0002009,7.42e-29,61;CL:0000763,6.58e-28,108;CL:0000049,6.58e-28,108;CL:0000839,7.41e-28,66;CL:0002194,1.04e-25,59;CL:0000576,1.04e-25,59;CL:0000040,1.04e-25,59;CL:0000559,1.04e-25,59;CL:0000738,5.31e-20,136;CL:0002032,3.86e-17,161;CL:0000837,3.86e-17,161;CL:0000037,6.02e-16,168;CL:0002031,6.82e-16,120;CL:0000094,3.62e-15,8;CL:0000988,1.48e-14,177;CL:0002087,1.91e-11,115;CL:0000081,1.10e-10,11;CL:0000775,6.03e-09,3|ontology_enrichment_development_v019=CL:0002057;8.97e-28;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.26e-18!102;UBERON:0003061!4.26e-18!102;UBERON:0002193!1.91e-17!112;UBERON:0002371!8.63e-17!80;UBERON:0004765!1.76e-14!101;UBERON:0001434!1.76e-14!101;UBERON:0001474!5.96e-14!86;UBERON:0002204!1.17e-13!167;UBERON:0002405!2.95e-11!115;UBERON:0007023!1.14e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-31,98;UBERON:0003061,2.20e-31,98;UBERON:0002371,7.78e-31,76;UBERON:0002193,4.76e-29,108;UBERON:0001474,7.45e-28,82;UBERON:0002405,5.36e-25,93;UBERON:0004765,1.68e-24,90;UBERON:0001434,4.52e-21,100;UBERON:0003081,7.05e-15,203;UBERON:0002204,5.51e-12,167;UBERON:0000926,1.91e-07,315;UBERON:0004120,1.91e-07,315;UBERON:0006603,1.91e-07,315;UBERON:0002780,2.61e-07,41;UBERON:0001890,2.61e-07,41;UBERON:0003080,2.61e-07,41;UBERON:0006240,2.61e-07,41;UBERON:0001869,3.81e-07,32|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.982935746006035,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,1.53531759238885,1.08371286321253,0,0,0,0.154934401160603,0,0,1.10799081706375,1.60435557976113,3.03815219002193,0,0,0,1.01778767145695,0.755751887377619,0.485168122375632,3.0215774797739,3.28934310417461,6.50383378879718,3.45230870786581,2.81776777182011,3.31075121844019,14.1345729102014,14.2006630388442,16.251178391321,2.63539275359647,0.818718450173537,3.37085226667627,8.57034898638527,8.98601275813062,12.1474053901818,0.659702600373432,0.398927315243264,0.426224750532694,28.7307146242298,19.8584828641899,21.7987787148451,3.51748131359441,2.08593167368081,5.86409880703815,20.5835830895345,23.2014910672166,32.5956259064111,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0.651083453856419,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.0843174571537,0,0.579386075843295,1.5905718941022,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0.97364218096405,0.522389211897802,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,35.5807127077371,38.7780264148325,0,0,0,0.397227542439656,0,0.709336764396714,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0.597794722207204,0.117434498643765,0,0,1.22492502752936,0.245668634623536,0.309977343527296,0,0,1.82032272387605,0.718618141816238,0.336672227908132,0.250237039743928,0.831192346452549,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.977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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000435434_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ENST00000435434_5end | |||
|id=chr10:106113320..106113338,- | |||
|ontology_enrichment_celltype=CL:0000766!8.07e-20!76;CL:0002057!2.83e-19!42;CL:0000839!7.05e-17!70;CL:0000860!9.30e-17!45;CL:0000557!1.22e-16!71;CL:0000763!4.00e-15!112;CL:0000049!4.00e-15!112;CL:0002009!5.32e-15!65;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000738!2.46e-11!140;CL:0002031!2.49e-10!124;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000037!2.69e-09!172;CL:0000566!2.69e-09!172;CL:0000988!1.11e-07!182;CL:0002087!1.74e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.49e-36;33!CL:0002057;8.49e-36;33!CL:0000473;1.32e-26;39!CL:0000234;1.32e-26;39!CL:0000576;1.96e-19;48!CL:0000766;5.60e-17;69!CL:0000094;3.25e-15;8!CL:0000081;1.02e-10;11!CL:0000775;6.07e-09;3!CL:0000763;1.07e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.81e-38,72;CL:0000860,2.32e-37,42;CL:0002057,2.32e-37,42;CL:0000473,2.95e-34,48;CL:0000234,2.95e-34,48;CL:0000557,1.38e-29,67;CL:0002009,7.42e-29,61;CL:0000763,6.58e-28,108;CL:0000049,6.58e-28,108;CL:0000839,7.41e-28,66;CL:0002194,1.04e-25,59;CL:0000576,1.04e-25,59;CL:0000040,1.04e-25,59;CL:0000559,1.04e-25,59;CL:0000738,5.31e-20,136;CL:0002032,3.86e-17,161;CL:0000837,3.86e-17,161;CL:0000037,6.02e-16,168;CL:0002031,6.82e-16,120;CL:0000094,3.62e-15,8;CL:0000988,1.48e-14,177;CL:0002087,1.91e-11,115;CL:0000081,1.10e-10,11;CL:0000775,6.03e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.97e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.26e-18!102;UBERON:0003061!4.26e-18!102;UBERON:0002193!1.91e-17!112;UBERON:0002371!8.63e-17!80;UBERON:0004765!1.76e-14!101;UBERON:0001434!1.76e-14!101;UBERON:0001474!5.96e-14!86;UBERON:0002204!1.17e-13!167;UBERON:0002405!2.95e-11!115;UBERON:0007023!1.14e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-31,98;UBERON:0003061,2.20e-31,98;UBERON:0002371,7.78e-31,76;UBERON:0002193,4.76e-29,108;UBERON:0001474,7.45e-28,82;UBERON:0002405,5.36e-25,93;UBERON:0004765,1.68e-24,90;UBERON:0001434,4.52e-21,100;UBERON:0003081,7.05e-15,203;UBERON:0002204,5.51e-12,167;UBERON:0000926,1.91e-07,315;UBERON:0004120,1.91e-07,315;UBERON:0006603,1.91e-07,315;UBERON:0002780,2.61e-07,41;UBERON:0001890,2.61e-07,41;UBERON:0003080,2.61e-07,41;UBERON:0006240,2.61e-07,41;UBERON:0001869,3.81e-07,32 | |||
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| |||
|short_description=p1@ENST00000435434 | |||
}} |
Revision as of 11:36, 10 September 2013
Short description: | p1@ENST00000435434 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000435434_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000435434_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.81e-38 | 72 |
classical monocyte | 2.32e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-37 | 42 |
defensive cell | 2.95e-34 | 48 |
phagocyte | 2.95e-34 | 48 |
granulocyte monocyte progenitor cell | 1.38e-29 | 67 |
macrophage dendritic cell progenitor | 7.42e-29 | 61 |
myeloid cell | 6.58e-28 | 108 |
common myeloid progenitor | 6.58e-28 | 108 |
myeloid lineage restricted progenitor cell | 7.41e-28 | 66 |
monopoietic cell | 1.04e-25 | 59 |
monocyte | 1.04e-25 | 59 |
monoblast | 1.04e-25 | 59 |
promonocyte | 1.04e-25 | 59 |
leukocyte | 5.31e-20 | 136 |
hematopoietic oligopotent progenitor cell | 3.86e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-17 | 161 |
hematopoietic stem cell | 6.02e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 6.82e-16 | 120 |
granulocyte | 3.62e-15 | 8 |
hematopoietic cell | 1.48e-14 | 177 |
nongranular leukocyte | 1.91e-11 | 115 |
blood cell | 1.10e-10 | 11 |
neutrophil | 6.03e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-31 | 98 |
blood island | 2.20e-31 | 98 |
bone marrow | 7.78e-31 | 76 |
hemolymphoid system | 4.76e-29 | 108 |
bone element | 7.45e-28 | 82 |
immune system | 5.36e-25 | 93 |
skeletal element | 1.68e-24 | 90 |
skeletal system | 4.52e-21 | 100 |
lateral plate mesoderm | 7.05e-15 | 203 |
musculoskeletal system | 5.51e-12 | 167 |
mesoderm | 1.91e-07 | 315 |
mesoderm-derived structure | 1.91e-07 | 315 |
presumptive mesoderm | 1.91e-07 | 315 |
regional part of forebrain | 2.61e-07 | 41 |
forebrain | 2.61e-07 | 41 |
anterior neural tube | 2.61e-07 | 41 |
future forebrain | 2.61e-07 | 41 |
cerebral hemisphere | 3.81e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.