FFCP PHASE1:Hg19::chr11:2291814..2291825,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=430|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=739|TSSclassifier=W|UniProt=Q99929|association_with_transcript=356bp_to_ENST00000331289,NM_005170,uc001lvu.2_5end|coexpression_cluster_id=C50|description=CAGE_peak_2_at_ASCL2_5end|id=chr11:2291814..2291825,-|ontology_enrichment_celltype=CL:0002057!2.41e-16!42;CL:0000860!7.47e-15!45;CL:0002087!2.73e-11!119;CL:0000738!3.96e-11!140;CL:0000839!4.58e-11!70;CL:0000557!8.05e-11!71;CL:0000766!1.03e-10!76;CL:0002031!2.57e-10!124;CL:0002194!8.69e-10!63;CL:0000576!8.69e-10!63;CL:0000040!8.69e-10!63;CL:0000559!8.69e-10!63;CL:0002393!1.17e-09!9;CL:0002397!1.17e-09!9;CL:0002009!2.56e-09!65;CL:0000625!3.67e-08!11;CL:0002541!5.77e-08!3;CL:0000037!7.24e-08!172;CL:0000566!7.24e-08!172;CL:0000623!1.78e-07!3;CL:0000825!1.78e-07!3;CL:0000988!6.22e-07!182;CL:0002032!8.87e-07!165;CL:0000837!8.87e-07!165|ontology_enrichment_celltype_v019=CL:0002541;2.18e-18;3!CL:0002178;1.04e-08;3!CL:0000623;1.66e-08;3!CL:0002563;8.75e-07;4|ontology_enrichment_celltype_v019_2=CL:0002541,2.31e-18,3;CL:0002178,1.02e-08,3;CL:0000623,1.73e-08,3;CL:0000825,1.73e-08,3;CL:0002563,8.75e-07,4|ontology_enrichment_development_v019=UBERON:0003124;3.17e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;5.36e-07;1!DOID:3149;5.36e-07;1!DOID:3119;7.75e-07;14|ontology_enrichment_disease_v019_2=DOID:3151,4.51e-07,1;DOID:3149,4.51e-07,1;DOID:3119,7.69e-07,14;DOID:178,8.98e-07,1;DOID:326,8.98e-07,1;DOID:3978,8.98e-07,1;DOID:3394,8.98e-07,1;DOID:5844,8.98e-07,1|ontology_enrichment_uberon=UBERON:0002390!4.34e-11!102;UBERON:0003061!4.34e-11!102;UBERON:0002193!3.48e-10!112;UBERON:0002371!6.67e-09!80;UBERON:0005409!2.67e-08!35;UBERON:0003124!4.03e-08!7;UBERON:0000476!5.77e-08!3;UBERON:0000920!5.77e-08!3;UBERON:0001474!7.32e-08!86;UBERON:0005631!5.70e-07!14;UBERON:0000158!5.70e-07!14;UBERON:0000160!5.77e-07!27|ontology_enrichment_uberon_v019=UBERON:0003124;2.18e-18;3!UBERON:0000920;2.18e-18;3!UBERON:0005409;3.14e-18;22!UBERON:0000160;2.90e-14;17!UBERON:0004921;1.23e-10;33!UBERON:0002108;1.96e-10;4!UBERON:0005631;1.15e-09;10!UBERON:0000158;1.15e-09;10!UBERON:0001000;5.36e-07;1!UBERON:0005352;5.36e-07;1!UBERON:0001242;8.75e-07;4!UBERON:0001262;8.75e-07;4!UBERON:0004786;8.75e-07;4!UBERON:0004808;8.75e-07;4!UBERON:0001277;8.75e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.31e-18,3;UBERON:0005409,5.47e-16,25;UBERON:0000160,2.67e-14,17;UBERON:0003124,1.06e-13,7;UBERON:0005631,2.26e-10,14;UBERON:0000158,2.26e-10,14;UBERON:0002108,2.38e-10,4;UBERON:0001000,4.25e-07,1;UBERON:0005352,4.25e-07,1;UBERON:0001242,8.75e-07,4;UBERON:0001262,8.75e-07,4;UBERON:0004786,8.75e-07,4;UBERON:0004808,8.75e-07,4;UBERON:0001277,8.75e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,1.31940520074686,0.797854630486527,1.27867425159808,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0.419317291016752,0.112328631146495,0.300353785683013,0,0.285012743741249,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,1.90090408889675,0.451725357233318,0.895906278080929,0,0,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1758554157682,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,2.15627574859517,2.43851768931522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0528205558952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0.952927101831156,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2796470232122,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,8.06184793133683,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,2.08342208868187,0,0,0.796554137998498,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,2.37020365273626,0,0,1.38338342632836,6.46255039750359,0.217294743844016,74.9652725370011,2.38153742844842,51.7043732738076,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,0.995261931078505,1.6806937255634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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=739 | |||
|TSSclassifier=W | |||
|UniProt=Q99929 | |||
|association_with_transcript=356bp_to_ENST00000331289,NM_005170,uc001lvu.2_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_ASCL2_5end | |||
|id=chr11:2291814..2291825,- | |||
|ontology_enrichment_celltype=CL:0002057!2.41e-16!42;CL:0000860!7.47e-15!45;CL:0002087!2.73e-11!119;CL:0000738!3.96e-11!140;CL:0000839!4.58e-11!70;CL:0000557!8.05e-11!71;CL:0000766!1.03e-10!76;CL:0002031!2.57e-10!124;CL:0002194!8.69e-10!63;CL:0000576!8.69e-10!63;CL:0000040!8.69e-10!63;CL:0000559!8.69e-10!63;CL:0002393!1.17e-09!9;CL:0002397!1.17e-09!9;CL:0002009!2.56e-09!65;CL:0000625!3.67e-08!11;CL:0002541!5.77e-08!3;CL:0000037!7.24e-08!172;CL:0000566!7.24e-08!172;CL:0000623!1.78e-07!3;CL:0000825!1.78e-07!3;CL:0000988!6.22e-07!182;CL:0002032!8.87e-07!165;CL:0000837!8.87e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.18e-18;3!CL:0002178;1.04e-08;3!CL:0000623;1.66e-08;3!CL:0002563;8.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.31e-18,3;CL:0002178,1.02e-08,3;CL:0000623,1.73e-08,3;CL:0000825,1.73e-08,3;CL:0002563,8.75e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.17e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.36e-07;1!DOID:3149;5.36e-07;1!DOID:3119;7.75e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.51e-07,1;DOID:3149,4.51e-07,1;DOID:3119,7.69e-07,14;DOID:178,8.98e-07,1;DOID:326,8.98e-07,1;DOID:3978,8.98e-07,1;DOID:3394,8.98e-07,1;DOID:5844,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.34e-11!102;UBERON:0003061!4.34e-11!102;UBERON:0002193!3.48e-10!112;UBERON:0002371!6.67e-09!80;UBERON:0005409!2.67e-08!35;UBERON:0003124!4.03e-08!7;UBERON:0000476!5.77e-08!3;UBERON:0000920!5.77e-08!3;UBERON:0001474!7.32e-08!86;UBERON:0005631!5.70e-07!14;UBERON:0000158!5.70e-07!14;UBERON:0000160!5.77e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.18e-18;3!UBERON:0000920;2.18e-18;3!UBERON:0005409;3.14e-18;22!UBERON:0000160;2.90e-14;17!UBERON:0004921;1.23e-10;33!UBERON:0002108;1.96e-10;4!UBERON:0005631;1.15e-09;10!UBERON:0000158;1.15e-09;10!UBERON:0001000;5.36e-07;1!UBERON:0005352;5.36e-07;1!UBERON:0001242;8.75e-07;4!UBERON:0001262;8.75e-07;4!UBERON:0004786;8.75e-07;4!UBERON:0004808;8.75e-07;4!UBERON:0001277;8.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.31e-18,3;UBERON:0005409,5.47e-16,25;UBERON:0000160,2.67e-14,17;UBERON:0003124,1.06e-13,7;UBERON:0005631,2.26e-10,14;UBERON:0000158,2.26e-10,14;UBERON:0002108,2.38e-10,4;UBERON:0001000,4.25e-07,1;UBERON:0005352,4.25e-07,1;UBERON:0001242,8.75e-07,4;UBERON:0001262,8.75e-07,4;UBERON:0004786,8.75e-07,4;UBERON:0004808,8.75e-07,4;UBERON:0001277,8.75e-07,4 | |||
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|short_description=p2@ASCL2 | |||
}} |
Revision as of 17:15, 10 September 2013
Short description: | p2@ASCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ASCL2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 356bp_to_ENST00000331289, NM_005170, uc001lvu.2_5end |
EntrezGene: | ASCL2 |
HGNC: | 739 |
UniProt: | Q99929 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.31e-18 | 3 |
epithelial cell of stomach | 1.02e-08 | 3 |
natural killer cell | 1.73e-08 | 3 |
pro-NK cell | 1.73e-08 | 3 |
intestinal epithelial cell | 8.75e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.31e-18 | 3 |
gastrointestinal system | 5.47e-16 | 25 |
intestine | 2.67e-14 | 17 |
chorion | 1.06e-13 | 7 |
extraembryonic membrane | 2.26e-10 | 14 |
membranous layer | 2.26e-10 | 14 |
small intestine | 2.38e-10 | 4 |
vas deferens | 4.25e-07 | 1 |
spermatic cord | 4.25e-07 | 1 |
intestinal mucosa | 8.75e-07 | 4 |
wall of intestine | 8.75e-07 | 4 |
gastrointestinal system mucosa | 8.75e-07 | 4 |
gastrointestinal system epithelium | 8.75e-07 | 4 |
intestinal epithelium | 8.75e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.51e-07 | 1 |
keratoacanthoma | 4.51e-07 | 1 |
gastrointestinal system cancer | 7.69e-07 | 14 |
vascular disease | 8.98e-07 | 1 |
ischemia | 8.98e-07 | 1 |
extrinsic cardiomyopathy | 8.98e-07 | 1 |
myocardial ischemia | 8.98e-07 | 1 |
myocardial infarction | 8.98e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.