FFCP PHASE1:Hg19::chr11:35201889..35201914,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000525209_5end | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_2_at_CD44_5end | |||
|id=chr11:35201889..35201914,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.30e-18!42;CL:0000860!1.92e-17!45;CL:0000557!1.47e-16!71;CL:0000766!1.89e-16!76;CL:0002009!1.12e-15!65;CL:0000839!2.48e-15!70;CL:0002371!3.02e-15!591;CL:0002194!3.28e-15!63;CL:0000576!3.28e-15!63;CL:0000040!3.28e-15!63;CL:0000559!3.28e-15!63;CL:0000048!4.21e-13!430;CL:0000723!5.85e-13!436;CL:0000144!3.88e-12!625;CL:0000034!3.62e-11!444;CL:0000055!1.75e-10!180;CL:0000003!4.12e-10!722;CL:0002320!4.88e-10!365;CL:0000134!1.10e-09!358;CL:0000548!2.41e-09!679;CL:0000004!2.41e-09!679;CL:0000255!2.41e-09!679;CL:0000012!7.58e-09!682;CL:0000219!1.18e-08!390;CL:0000057!3.65e-07!75;CL:0002031!8.63e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-18;33!CL:0002057;1.13e-18;33!CL:0000473;2.08e-16;39!CL:0000234;2.08e-16;39!CL:0000576;1.80e-09;48!CL:0000766;1.93e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.33e-19,48;CL:0000234,1.33e-19,48;CL:0000860,1.63e-18,42;CL:0002057,1.63e-18,42;CL:0000557,4.37e-17,67;CL:0000766,7.82e-17,72;CL:0002009,3.97e-16,61;CL:0000839,8.60e-16,66;CL:0002194,1.17e-15,59;CL:0000576,1.17e-15,59;CL:0000040,1.17e-15,59;CL:0000559,1.17e-15,59;CL:0000048,7.78e-14,427;CL:0000723,1.37e-13,433;CL:0000034,1.27e-11,441;CL:0002320,1.32e-10,361;CL:0000134,3.02e-10,354;CL:0000219,5.03e-09,386;CL:0000057,2.34e-07,76;CL:0002031,4.02e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.95e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.62e-18!167;UBERON:0002371!9.67e-16!80;UBERON:0004765!2.18e-13!101;UBERON:0001434!2.18e-13!101;UBERON:0001474!5.59e-13!86;UBERON:0002390!6.04e-12!102;UBERON:0003061!6.04e-12!102;UBERON:0002193!9.80e-10!112;UBERON:0002384!5.92e-09!375;UBERON:0003102!1.46e-08!95;UBERON:0003081!5.82e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.74e-19,167;UBERON:0002371,3.73e-16,76;UBERON:0004765,2.67e-14,90;UBERON:0001434,5.48e-14,100;UBERON:0001474,2.64e-13,82;UBERON:0002390,4.06e-12,98;UBERON:0003061,4.06e-12,98;UBERON:0002405,9.33e-11,93;UBERON:0002193,9.27e-10,108;UBERON:0002384,1.52e-09,371;UBERON:0000926,3.53e-09,315;UBERON:0004120,3.53e-09,315;UBERON:0006603,3.53e-09,315;UBERON:0003102,4.74e-09,99;UBERON:0003081,7.38e-08,203;UBERON:0002199,8.87e-07,46;UBERON:0002416,8.87e-07,46 | |||
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| |||
|short_description=p2@CD44 | |||
}} |
Revision as of 17:37, 10 September 2013
Short description: | p2@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 0bp_to_ENST00000525209_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.33e-19 | 48 |
phagocyte | 1.33e-19 | 48 |
classical monocyte | 1.63e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-18 | 42 |
granulocyte monocyte progenitor cell | 4.37e-17 | 67 |
myeloid leukocyte | 7.82e-17 | 72 |
macrophage dendritic cell progenitor | 3.97e-16 | 61 |
myeloid lineage restricted progenitor cell | 8.60e-16 | 66 |
monopoietic cell | 1.17e-15 | 59 |
monocyte | 1.17e-15 | 59 |
monoblast | 1.17e-15 | 59 |
promonocyte | 1.17e-15 | 59 |
multi fate stem cell | 7.78e-14 | 427 |
somatic stem cell | 1.37e-13 | 433 |
stem cell | 1.27e-11 | 441 |
connective tissue cell | 1.32e-10 | 361 |
mesenchymal cell | 3.02e-10 | 354 |
motile cell | 5.03e-09 | 386 |
fibroblast | 2.34e-07 | 76 |
hematopoietic lineage restricted progenitor cell | 4.02e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.74e-19 | 167 |
bone marrow | 3.73e-16 | 76 |
skeletal element | 2.67e-14 | 90 |
skeletal system | 5.48e-14 | 100 |
bone element | 2.64e-13 | 82 |
hematopoietic system | 4.06e-12 | 98 |
blood island | 4.06e-12 | 98 |
immune system | 9.33e-11 | 93 |
hemolymphoid system | 9.27e-10 | 108 |
connective tissue | 1.52e-09 | 371 |
mesoderm | 3.53e-09 | 315 |
mesoderm-derived structure | 3.53e-09 | 315 |
presumptive mesoderm | 3.53e-09 | 315 |
surface structure | 4.74e-09 | 99 |
lateral plate mesoderm | 7.38e-08 | 203 |
integument | 8.87e-07 | 46 |
integumental system | 8.87e-07 | 46 |
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