FFCP PHASE1:Hg19::chr12:14967095..14967123,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=440087|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=34401|TSSclassifier=S|UniProt=A2RU48|association_with_transcript=0bp_to_ENST00000316048,NM_001013698,uc001rck.1_5end|coexpression_cluster_id=C68|description=CAGE_peak_1_at_C12orf69_5end|id=chr12:14967095..14967123,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.63e-17;19!CL:0002577;4.79e-14;3!CL:0002615;1.30e-13;3!CL:0002579;1.22e-12;3!CL:0000306;1.35e-09;4!CL:0002222;1.35e-09;4!CL:0002224;1.35e-09;4!CL:0002561;1.41e-09;2!CL:0002195;1.05e-08;2!CL:0002571;1.05e-08;2!CL:0002537;1.16e-08;5|ontology_enrichment_celltype_v019_2=CL:0000349,3.75e-17,19;CL:0002577,4.71e-14,3;CL:0002615,1.61e-13,3;CL:0002579,9.05e-13,3;CL:0002561,1.19e-09,2;CL:0000306,1.96e-09,4;CL:0002222,1.96e-09,4;CL:0002224,1.96e-09,4;CL:0002537,1.15e-08,5;CL:0002195,1.63e-08,2;CL:0002571,1.63e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.17e-14!14;UBERON:0000158!3.17e-14!14;UBERON:0000478!2.45e-11!24;UBERON:0004923!1.60e-10!57;UBERON:0003124!2.80e-10!7;UBERON:0003688!7.09e-10!6;UBERON:0002358!7.09e-10!6;UBERON:0003684!7.09e-10!6;UBERON:0001178!7.09e-10!6;UBERON:0002100!1.07e-07!216;UBERON:0001987!2.80e-07!4;UBERON:0004340!2.80e-07!4;UBERON:0004457!3.73e-07!12;UBERON:0000042!3.73e-07!12|ontology_enrichment_uberon_v019=UBERON:0003688;1.74e-24;6!UBERON:0002358;1.74e-24;6!UBERON:0003684;1.74e-24;6!UBERON:0001178;1.74e-24;6!UBERON:0000478;1.16e-19;24!UBERON:0001987;1.63e-17;4!UBERON:0004457;4.06e-16;9!UBERON:0000042;4.06e-16;9!UBERON:0005631;7.94e-11;10!UBERON:0000158;7.94e-11;10!UBERON:0000305;2.89e-10;7!UBERON:0010077;1.35e-09;4!UBERON:0005389;1.35e-09;4!UBERON:0000484;1.35e-09;4!UBERON:0000965;1.35e-09;4!UBERON:0001803;1.35e-09;4!UBERON:0005933;1.41e-09;2!UBERON:0005942;1.41e-09;2!UBERON:0005932;1.41e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.58e-24,6;UBERON:0002358,1.58e-24,6;UBERON:0003684,1.58e-24,6;UBERON:0001178,1.58e-24,6;UBERON:0005631,1.57e-23,14;UBERON:0000158,1.57e-23,14;UBERON:0000478,1.42e-19,24;UBERON:0001987,2.33e-17,4;UBERON:0004340,2.33e-17,4;UBERON:0003124,3.37e-15,7;UBERON:0004923,2.22e-14,66;UBERON:0004457,6.02e-12,12;UBERON:0000042,6.02e-12,12;UBERON:0000305,2.93e-10,7;UBERON:0005933,1.19e-09,2;UBERON:0005942,1.19e-09,2;UBERON:0005932,1.19e-09,2;UBERON:0010077,1.96e-09,4;UBERON:0005389,1.96e-09,4;UBERON:0000484,1.96e-09,4;UBERON:0002546,1.96e-09,4;UBERON:0000965,1.96e-09,4;UBERON:0001803,1.96e-09,4;UBERON:0003073,1.96e-09,4;UBERON:0005426,1.96e-09,4;UBERON:0004871,5.63e-09,8;UBERON:0005795,1.82e-08,22|phase1_expression=1.63510541343501,0.642301571672949,5.3562673556469,3.00219895059391,3.12872766099101,0.872338524100369,0,0,0,0,0,0.873765488520689,2.37390280405608,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.39293562831038,2.51577443545116,0.860509862246441,0,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,3.71494342425583,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,1.04337364477569,3.99189560401794,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0,0,0,0.444485260045183,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,3.36106460970222,0,0,0,0,0,0,0,1.28680194292333,0.542621605391443,0,0,1.06617584622764,0,0.301439377059586,0,0,0,0,0,0,0,0,2.89562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,7.57818928615649,8.32177197552485,9.97887967987945,1.98486246255021,0.306923946576125,0,1.79394808957981,1.53512174720011,3.05622450172854,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0.537101224341368,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.429374660225974,0,0.949138274156178,0,0,0,0,0,1.2591072030832,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,2.2624869112594,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,1.47373561519682,0.35667105148125,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,19.0995587790152,8.90894042497916,32.2518737204194,0,0,0,0,0.211125408127993,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=440087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34401 | |||
|TSSclassifier=S | |||
|UniProt=A2RU48 | |||
|association_with_transcript=0bp_to_ENST00000316048,NM_001013698,uc001rck.1_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_C12orf69_5end | |||
|id=chr12:14967095..14967123,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.63e-17;19!CL:0002577;4.79e-14;3!CL:0002615;1.30e-13;3!CL:0002579;1.22e-12;3!CL:0000306;1.35e-09;4!CL:0002222;1.35e-09;4!CL:0002224;1.35e-09;4!CL:0002561;1.41e-09;2!CL:0002195;1.05e-08;2!CL:0002571;1.05e-08;2!CL:0002537;1.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.75e-17,19;CL:0002577,4.71e-14,3;CL:0002615,1.61e-13,3;CL:0002579,9.05e-13,3;CL:0002561,1.19e-09,2;CL:0000306,1.96e-09,4;CL:0002222,1.96e-09,4;CL:0002224,1.96e-09,4;CL:0002537,1.15e-08,5;CL:0002195,1.63e-08,2;CL:0002571,1.63e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.17e-14!14;UBERON:0000158!3.17e-14!14;UBERON:0000478!2.45e-11!24;UBERON:0004923!1.60e-10!57;UBERON:0003124!2.80e-10!7;UBERON:0003688!7.09e-10!6;UBERON:0002358!7.09e-10!6;UBERON:0003684!7.09e-10!6;UBERON:0001178!7.09e-10!6;UBERON:0002100!1.07e-07!216;UBERON:0001987!2.80e-07!4;UBERON:0004340!2.80e-07!4;UBERON:0004457!3.73e-07!12;UBERON:0000042!3.73e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.74e-24;6!UBERON:0002358;1.74e-24;6!UBERON:0003684;1.74e-24;6!UBERON:0001178;1.74e-24;6!UBERON:0000478;1.16e-19;24!UBERON:0001987;1.63e-17;4!UBERON:0004457;4.06e-16;9!UBERON:0000042;4.06e-16;9!UBERON:0005631;7.94e-11;10!UBERON:0000158;7.94e-11;10!UBERON:0000305;2.89e-10;7!UBERON:0010077;1.35e-09;4!UBERON:0005389;1.35e-09;4!UBERON:0000484;1.35e-09;4!UBERON:0000965;1.35e-09;4!UBERON:0001803;1.35e-09;4!UBERON:0005933;1.41e-09;2!UBERON:0005942;1.41e-09;2!UBERON:0005932;1.41e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.58e-24,6;UBERON:0002358,1.58e-24,6;UBERON:0003684,1.58e-24,6;UBERON:0001178,1.58e-24,6;UBERON:0005631,1.57e-23,14;UBERON:0000158,1.57e-23,14;UBERON:0000478,1.42e-19,24;UBERON:0001987,2.33e-17,4;UBERON:0004340,2.33e-17,4;UBERON:0003124,3.37e-15,7;UBERON:0004923,2.22e-14,66;UBERON:0004457,6.02e-12,12;UBERON:0000042,6.02e-12,12;UBERON:0000305,2.93e-10,7;UBERON:0005933,1.19e-09,2;UBERON:0005942,1.19e-09,2;UBERON:0005932,1.19e-09,2;UBERON:0010077,1.96e-09,4;UBERON:0005389,1.96e-09,4;UBERON:0000484,1.96e-09,4;UBERON:0002546,1.96e-09,4;UBERON:0000965,1.96e-09,4;UBERON:0001803,1.96e-09,4;UBERON:0003073,1.96e-09,4;UBERON:0005426,1.96e-09,4;UBERON:0004871,5.63e-09,8;UBERON:0005795,1.82e-08,22 | |||
|phase1_expression=1.63510541343501,0.642301571672949,5.3562673556469,3.00219895059391,3.12872766099101,0.872338524100369,0,0,0,0,0,0.873765488520689,2.37390280405608,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.39293562831038,2.51577443545116,0.860509862246441,0,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,3.71494342425583,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,1.04337364477569,3.99189560401794,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0,0,0,0.444485260045183,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,3.36106460970222,0,0,0,0,0,0,0,1.28680194292333,0.542621605391443,0,0,1.06617584622764,0,0.301439377059586,0,0,0,0,0,0,0,0,2.89562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,7.57818928615649,8.32177197552485,9.97887967987945,1.98486246255021,0.306923946576125,0,1.79394808957981,1.53512174720011,3.05622450172854,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0.537101224341368,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.429374660225974,0,0.949138274156178,0,0,0,0,0,1.2591072030832,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,2.2624869112594,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,1.47373561519682,0.35667105148125,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,19.0995587790152,8.90894042497916,32.2518737204194,0,0,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,4.84786628573922,0,0,0.179515288819544,0,7.01802551410223,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,2.40109002588254,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0.403100834920358,1.08089965062721,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,1.89133697518076,0.577000469484979,0.633602019116439,0,0,0,0,0,0,1.72844298240254,0,1.19730191562487,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.854299300541557,1.41483874589699,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.06442844195167,0,0,0.135939465953663,0.0657727735628491,0,0,0.470958557103084,0,0,1.82631744101899,0,0,1.71543706023975,0,0,0,0,0,1.7071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.891139200981258,3.3812458206672,0,0.281951753939561,0.644578879735772,0,0,0.705789743431384,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,2.29129769801394,0.202117188958219,0.217716747896961,1.02669990325584,0,0.286888821570705,0,0,0.320182037633146,0,0,7.03922827210363,0.488965776731466,2.84827324821017,0,0.201273793591026,0 | |||
|short_description=p1@C12orf69 | |||
}} |
Revision as of 21:55, 10 September 2013
Short description: | p1@C12orf69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C12orf69_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000316048, NM_001013698, uc001rck.1_5end |
EntrezGene: | C12orf69 |
HGNC: | 34401 |
UniProt: | A2RU48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.75e-17 | 19 |
placental epithelial cell | 4.71e-14 | 3 |
adipocyte of omentum tissue | 1.61e-13 | 3 |
omentum preadipocyte | 9.05e-13 | 3 |
outer root sheath cell | 1.19e-09 | 2 |
crystallin accumulating cell | 1.96e-09 | 4 |
vertebrate lens cell | 1.96e-09 | 4 |
lens epithelial cell | 1.96e-09 | 4 |
amnion mesenchymal stem cell | 1.15e-08 | 5 |
hepatic stem cell | 1.63e-08 | 2 |
hepatic mesenchymal stem cell | 1.63e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.58e-24 | 6 |
peritoneum | 1.58e-24 | 6 |
abdominal cavity | 1.58e-24 | 6 |
visceral peritoneum | 1.58e-24 | 6 |
extraembryonic membrane | 1.57e-23 | 14 |
membranous layer | 1.57e-23 | 14 |
extraembryonic structure | 1.42e-19 | 24 |
placenta | 2.33e-17 | 4 |
allantois | 2.33e-17 | 4 |
chorion | 3.37e-15 | 7 |
organ component layer | 2.22e-14 | 66 |
cavity lining | 6.02e-12 | 12 |
serous membrane | 6.02e-12 | 12 |
amnion | 2.93e-10 | 7 |
hair root sheath | 1.19e-09 | 2 |
hair outer root sheath | 1.19e-09 | 2 |
bulb of hair follicle | 1.19e-09 | 2 |
cuboidal epithelium | 1.96e-09 | 4 |
transparent eye structure | 1.96e-09 | 4 |
simple cuboidal epithelium | 1.96e-09 | 4 |
cranial placode | 1.96e-09 | 4 |
lens of camera-type eye | 1.96e-09 | 4 |
epithelium of lens | 1.96e-09 | 4 |
lens placode | 1.96e-09 | 4 |
lens vesicle | 1.96e-09 | 4 |
somatic layer of lateral plate mesoderm | 5.63e-09 | 8 |
embryonic uterus | 1.82e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.