FFCP PHASE1:Hg19::chr1:68851155..68851158,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:68851155..68851158,+|id=chr1:68851155..68851158,+|ontology_enrichment_celltype=CL:0000055!3.44e-18!180;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000183!1.24e-11!59;CL:0000187!3.42e-11!54;CL:0000057!6.77e-10!75;CL:0000393!2.19e-09!60;CL:0000211!2.19e-09!60;CL:0000192!3.53e-09!42;CL:0000514!3.53e-09!42;CL:0000222!1.60e-07!119;CL:0002594!3.48e-07!4;CL:0002548!4.99e-07!6;CL:0000359!8.51e-07!32|ontology_enrichment_celltype_v019=CL:0002554;1.86e-12;2!CL:0002195;4.61e-12;2!CL:0002571;4.61e-12;2!CL:0002367;4.61e-12;2!CL:0002556;4.03e-09;6!CL:0002592;2.50e-08;3!CL:0000359;3.19e-07;32!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002550;7.34e-07;1!CL:0000216;7.34e-07;1|ontology_enrichment_celltype_v019_2=CL:0002554,1.41e-12,2;CL:0002367,3.92e-12,2;CL:0002195,1.66e-11,2;CL:0002571,1.66e-11,2;CL:0002556,7.20e-09,6;CL:0002592,3.02e-08,3;CL:0000359,8.55e-08,32;CL:0000192,2.77e-07,43;CL:0000514,2.77e-07,43;CL:0000511,4.78e-07,1;CL:0002625,4.78e-07,1;CL:0000216,4.78e-07,1;CL:0002550,6.76e-07,1;CL:0000057,9.13e-07,76|ontology_enrichment_development_v019=UBERON:0003099;2.49e-07;1!UBERON:0003852;2.49e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.36e-17!83;UBERON:0002329!1.36e-17!83;UBERON:0003077!1.36e-17!83;UBERON:0003059!1.36e-17!83;UBERON:0007282!1.36e-17!83;UBERON:0009618!1.36e-17!83;UBERON:0007285!1.36e-17!83;UBERON:0005256!1.63e-15!143;UBERON:0004290!1.14e-14!70;UBERON:0001134!5.75e-12!61;UBERON:0002036!5.75e-12!61;UBERON:0003082!5.75e-12!61;UBERON:0000486!5.87e-12!82;UBERON:0002385!2.44e-11!63;UBERON:0001015!2.44e-11!63;UBERON:0000383!2.44e-11!63;UBERON:0000475!1.34e-10!365;UBERON:0002100!1.56e-10!216;UBERON:0003104!2.77e-10!238;UBERON:0009142!2.77e-10!238;UBERON:0000481!2.77e-10!347;UBERON:0000119!5.24e-08!312;UBERON:0000483!7.36e-08!309;UBERON:0000490!2.16e-07!138;UBERON:0001310!3.48e-07!4;UBERON:0003102!4.00e-07!95;UBERON:0002049!5.93e-07!79;UBERON:0007798!5.93e-07!79|ontology_enrichment_uberon_v019=UBERON:0005969;4.61e-12;2!UBERON:0003956;4.61e-12;2!UBERON:0001758;4.03e-09;6!UBERON:0003672;4.03e-09;6!UBERON:0011137;1.44e-08;11!UBERON:0010323;1.44e-08;11!UBERON:0003498;2.50e-08;3!UBERON:0005985;2.50e-08;3!UBERON:0001621;2.50e-08;3!UBERON:0003129;7.02e-08;7!UBERON:0005705;2.49e-07;1!UBERON:0008193;2.49e-07;1!UBERON:0010912;2.49e-07;1!UBERON:0002514;2.49e-07;1!UBERON:0003457;2.49e-07;1!UBERON:0008907;2.49e-07;1!UBERON:0008001;2.49e-07;1!UBERON:0007213;2.49e-07;1!UBERON:0009891;2.49e-07;1!UBERON:0007914;2.49e-07;1!UBERON:0007375;2.49e-07;1!UBERON:0003323;2.49e-07;1!UBERON:0010258;2.49e-07;1!UBERON:0005253;2.49e-07;1!UBERON:0007842;2.49e-07;1!UBERON:0002397;2.49e-07;1!UBERON:0003113;2.49e-07;1!UBERON:0003277;2.49e-07;1!UBERON:0001709;2.49e-07;1!UBERON:0002244;2.49e-07;1!UBERON:0005620;2.49e-07;1!UBERON:0010364;2.49e-07;1!UBERON:0004288;2.49e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.92e-12,2;UBERON:0003956,3.92e-12,2;UBERON:0001758,7.20e-09,6;UBERON:0003672,7.20e-09,6;UBERON:0010323,2.19e-08,11;UBERON:0001621,3.02e-08,3;UBERON:0002049,4.81e-08,78;UBERON:0007798,4.81e-08,78;UBERON:0003129,1.15e-07,7;UBERON:0005705,2.50e-07,1;UBERON:0008193,2.50e-07,1;UBERON:0010912,2.50e-07,1;UBERON:0002514,2.50e-07,1;UBERON:0003457,2.50e-07,1;UBERON:0008907,2.50e-07,1;UBERON:0008001,2.50e-07,1;UBERON:0007213,2.50e-07,1;UBERON:0009891,2.50e-07,1;UBERON:0007914,2.50e-07,1;UBERON:0009292,2.50e-07,1;UBERON:0003099,2.50e-07,1;UBERON:0007375,2.50e-07,1;UBERON:0003323,2.50e-07,1;UBERON:0010258,2.50e-07,1;UBERON:0007842,2.50e-07,1;UBERON:0009494,2.50e-07,1;UBERON:0010042,2.50e-07,1;UBERON:0010045,2.50e-07,1;UBERON:0010259,2.50e-07,1;UBERON:0010359,2.50e-07,1;UBERON:0009526,2.50e-07,1;UBERON:0002397,2.50e-07,1;UBERON:0003113,2.50e-07,1;UBERON:0003277,2.50e-07,1;UBERON:0001709,2.50e-07,1;UBERON:0004066,2.50e-07,1;UBERON:0002244,2.50e-07,1;UBERON:0005620,2.50e-07,1;UBERON:0004362,2.50e-07,1;UBERON:0010364,2.50e-07,1;UBERON:0010046,2.50e-07,1;UBERON:0005868,2.50e-07,1;UBERON:0007238,2.50e-07,1;UBERON:0004288,2.50e-07,1;UBERON:0004068,2.50e-07,1;UBERON:0010334,2.50e-07,1;UBERON:0003852,2.50e-07,1;UBERON:0010253,2.50e-07,1;UBERON:0004535,3.26e-07,109;UBERON:0001136,4.78e-07,1;UBERON:0001343,4.78e-07,1;UBERON:0004910,4.78e-07,1;UBERON:0005154,4.78e-07,1;UBERON:0005295,4.78e-07,1;UBERON:0004813,4.78e-07,1;UBERON:0005297,4.78e-07,1;UBERON:0005294,4.78e-07,1;UBERON:0010141,4.78e-07,1;UBERON:0005891,4.78e-07,1;UBERON:0001009,6.01e-07,112|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,1.96587149201207,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:68851155..68851158,+ | |||
|id=chr1:68851155..68851158,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.44e-18!180;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000183!1.24e-11!59;CL:0000187!3.42e-11!54;CL:0000057!6.77e-10!75;CL:0000393!2.19e-09!60;CL:0000211!2.19e-09!60;CL:0000192!3.53e-09!42;CL:0000514!3.53e-09!42;CL:0000222!1.60e-07!119;CL:0002594!3.48e-07!4;CL:0002548!4.99e-07!6;CL:0000359!8.51e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002554;1.86e-12;2!CL:0002195;4.61e-12;2!CL:0002571;4.61e-12;2!CL:0002367;4.61e-12;2!CL:0002556;4.03e-09;6!CL:0002592;2.50e-08;3!CL:0000359;3.19e-07;32!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002550;7.34e-07;1!CL:0000216;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.41e-12,2;CL:0002367,3.92e-12,2;CL:0002195,1.66e-11,2;CL:0002571,1.66e-11,2;CL:0002556,7.20e-09,6;CL:0002592,3.02e-08,3;CL:0000359,8.55e-08,32;CL:0000192,2.77e-07,43;CL:0000514,2.77e-07,43;CL:0000511,4.78e-07,1;CL:0002625,4.78e-07,1;CL:0000216,4.78e-07,1;CL:0002550,6.76e-07,1;CL:0000057,9.13e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.49e-07;1!UBERON:0003852;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-17!83;UBERON:0002329!1.36e-17!83;UBERON:0003077!1.36e-17!83;UBERON:0003059!1.36e-17!83;UBERON:0007282!1.36e-17!83;UBERON:0009618!1.36e-17!83;UBERON:0007285!1.36e-17!83;UBERON:0005256!1.63e-15!143;UBERON:0004290!1.14e-14!70;UBERON:0001134!5.75e-12!61;UBERON:0002036!5.75e-12!61;UBERON:0003082!5.75e-12!61;UBERON:0000486!5.87e-12!82;UBERON:0002385!2.44e-11!63;UBERON:0001015!2.44e-11!63;UBERON:0000383!2.44e-11!63;UBERON:0000475!1.34e-10!365;UBERON:0002100!1.56e-10!216;UBERON:0003104!2.77e-10!238;UBERON:0009142!2.77e-10!238;UBERON:0000481!2.77e-10!347;UBERON:0000119!5.24e-08!312;UBERON:0000483!7.36e-08!309;UBERON:0000490!2.16e-07!138;UBERON:0001310!3.48e-07!4;UBERON:0003102!4.00e-07!95;UBERON:0002049!5.93e-07!79;UBERON:0007798!5.93e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;4.61e-12;2!UBERON:0003956;4.61e-12;2!UBERON:0001758;4.03e-09;6!UBERON:0003672;4.03e-09;6!UBERON:0011137;1.44e-08;11!UBERON:0010323;1.44e-08;11!UBERON:0003498;2.50e-08;3!UBERON:0005985;2.50e-08;3!UBERON:0001621;2.50e-08;3!UBERON:0003129;7.02e-08;7!UBERON:0005705;2.49e-07;1!UBERON:0008193;2.49e-07;1!UBERON:0010912;2.49e-07;1!UBERON:0002514;2.49e-07;1!UBERON:0003457;2.49e-07;1!UBERON:0008907;2.49e-07;1!UBERON:0008001;2.49e-07;1!UBERON:0007213;2.49e-07;1!UBERON:0009891;2.49e-07;1!UBERON:0007914;2.49e-07;1!UBERON:0007375;2.49e-07;1!UBERON:0003323;2.49e-07;1!UBERON:0010258;2.49e-07;1!UBERON:0005253;2.49e-07;1!UBERON:0007842;2.49e-07;1!UBERON:0002397;2.49e-07;1!UBERON:0003113;2.49e-07;1!UBERON:0003277;2.49e-07;1!UBERON:0001709;2.49e-07;1!UBERON:0002244;2.49e-07;1!UBERON:0005620;2.49e-07;1!UBERON:0010364;2.49e-07;1!UBERON:0004288;2.49e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.92e-12,2;UBERON:0003956,3.92e-12,2;UBERON:0001758,7.20e-09,6;UBERON:0003672,7.20e-09,6;UBERON:0010323,2.19e-08,11;UBERON:0001621,3.02e-08,3;UBERON:0002049,4.81e-08,78;UBERON:0007798,4.81e-08,78;UBERON:0003129,1.15e-07,7;UBERON:0005705,2.50e-07,1;UBERON:0008193,2.50e-07,1;UBERON:0010912,2.50e-07,1;UBERON:0002514,2.50e-07,1;UBERON:0003457,2.50e-07,1;UBERON:0008907,2.50e-07,1;UBERON:0008001,2.50e-07,1;UBERON:0007213,2.50e-07,1;UBERON:0009891,2.50e-07,1;UBERON:0007914,2.50e-07,1;UBERON:0009292,2.50e-07,1;UBERON:0003099,2.50e-07,1;UBERON:0007375,2.50e-07,1;UBERON:0003323,2.50e-07,1;UBERON:0010258,2.50e-07,1;UBERON:0007842,2.50e-07,1;UBERON:0009494,2.50e-07,1;UBERON:0010042,2.50e-07,1;UBERON:0010045,2.50e-07,1;UBERON:0010259,2.50e-07,1;UBERON:0010359,2.50e-07,1;UBERON:0009526,2.50e-07,1;UBERON:0002397,2.50e-07,1;UBERON:0003113,2.50e-07,1;UBERON:0003277,2.50e-07,1;UBERON:0001709,2.50e-07,1;UBERON:0004066,2.50e-07,1;UBERON:0002244,2.50e-07,1;UBERON:0005620,2.50e-07,1;UBERON:0004362,2.50e-07,1;UBERON:0010364,2.50e-07,1;UBERON:0010046,2.50e-07,1;UBERON:0005868,2.50e-07,1;UBERON:0007238,2.50e-07,1;UBERON:0004288,2.50e-07,1;UBERON:0004068,2.50e-07,1;UBERON:0010334,2.50e-07,1;UBERON:0003852,2.50e-07,1;UBERON:0010253,2.50e-07,1;UBERON:0004535,3.26e-07,109;UBERON:0001136,4.78e-07,1;UBERON:0001343,4.78e-07,1;UBERON:0004910,4.78e-07,1;UBERON:0005154,4.78e-07,1;UBERON:0005295,4.78e-07,1;UBERON:0004813,4.78e-07,1;UBERON:0005297,4.78e-07,1;UBERON:0005294,4.78e-07,1;UBERON:0010141,4.78e-07,1;UBERON:0005891,4.78e-07,1;UBERON:0001009,6.01e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,1.96587149201207,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.850813354476611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.775250277507987,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0.709336764396714,1.12135520028461,0,0.24666754841716,1.55605517699883,0.808264032418128,0.980771418680752,0,0,1.40592859100278,0.936480230490962,0,1.34503812496621,0.587172493218824,0.161872944368132,0.421352420106746,1.42907919878425,0.61417158655884,0.929932030581889,0,0,2.73048408581408,1.43723628363248,6.06010010234638,1.00094815897571,1.10825646193673,0,0,0,0.680593098960126,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.389748020644795,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,2.05765899409714,0,1.3321108950805,1.00084595560703,0,1.64648067356154,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0,0.60818530127658,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,1.83703117063371,0,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,1.90921948755562,0,0,0.823611089208164,0.589062011728432,1.01091240786658,1.58510321173008,0,0,0.243713489631284,0,0,4.24216295861138,0,4.41092274836899,0,0,0.578775534266688,0,0.405820753925408,1.54911749049875,1.97186921772569,1.14729081763241,0.196498082026242,0.35667105148125,0,0,0,1.13841952129715,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,2.17446729717782,2.71967400412066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844802692155252,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.63718706865481,0,0.621051827505038,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52675943690684,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.556157009460346,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.339854229375634,0,0.257831551894309,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.718601616852695,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:68851155..68851158,+ | |||
}} |
Revision as of 06:37, 12 September 2013
Short description: | p@chr1:68851155..68851158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:68851155..68851158, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.41e-12 | 2 |
trabecular meshwork cell | 3.92e-12 | 2 |
hepatic stem cell | 1.66e-11 | 2 |
hepatic mesenchymal stem cell | 1.66e-11 | 2 |
fibroblast of periodontium | 7.20e-09 | 6 |
smooth muscle cell of the coronary artery | 3.02e-08 | 3 |
vascular associated smooth muscle cell | 8.55e-08 | 32 |
smooth muscle cell | 2.77e-07 | 43 |
smooth muscle myoblast | 2.77e-07 | 43 |
androgen binding protein secreting cell | 4.78e-07 | 1 |
seminiferous tubule epithelial cell | 4.78e-07 | 1 |
Sertoli cell | 4.78e-07 | 1 |
fibroblast of the conjuctiva | 6.76e-07 | 1 |
fibroblast | 9.13e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.