FFCP PHASE1:Mm9::chr12:47885301..47885305,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:47885301..47885305,-|id=chr12:47885301..47885305,-|ontology_enrichment_celltype=CL:0000117!5.37e-07!23;CL:0000337!5.37e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-23,23;CL:0000337,2.90e-23,23;CL:0000540,1.01e-15,33;CL:0000047,1.01e-15,33;CL:0000031,1.01e-15,33;CL:0000404,1.01e-15,33;CL:0002612,2.14e-15,3;CL:0000120,8.81e-15,3;CL:0000393,4.75e-13,39;CL:0000211,4.75e-13,39;CL:0002319,1.11e-11,43;CL:0000221,2.24e-11,44;CL:0000133,2.24e-11,44;CL:0002614,3.14e-07,3;CL:0002613,4.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.31e-11!63;UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0002346!3.97e-11!71;UBERON:0003075!3.97e-11!71;UBERON:0007284!3.97e-11!71;UBERON:0001049!5.37e-10!52;UBERON:0005068!5.37e-10!52;UBERON:0006241!5.37e-10!52;UBERON:0007135!5.37e-10!52;UBERON:0001017!5.69e-10!73;UBERON:0005743!5.69e-10!73;UBERON:0000073!3.25e-09!75;UBERON:0001016!3.25e-09!75;UBERON:0000955!6.59e-09!50;UBERON:0006238!6.59e-09!50;UBERON:0002616!1.09e-08!49;UBERON:0003056!1.38e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.13e-19,12;UBERON:0003057,6.13e-19,12;UBERON:0001017,2.48e-16,73;UBERON:0001016,7.87e-16,75;UBERON:0002257,2.14e-15,3;UBERON:0001049,1.80e-13,52;UBERON:0005068,1.80e-13,52;UBERON:0006241,1.80e-13,52;UBERON:0007135,1.80e-13,52;UBERON:0002240,3.57e-13,6;UBERON:0005174,3.57e-13,6;UBERON:0001137,3.57e-13,6;UBERON:0000073,7.30e-13,54;UBERON:0004121,5.79e-12,95;UBERON:0000924,5.79e-12,95;UBERON:0006601,5.79e-12,95;UBERON:0002950,2.72e-11,4;UBERON:0001891,2.72e-11,4;UBERON:0009616,2.72e-11,4;UBERON:0010286,2.72e-11,4;UBERON:0002346,1.47e-10,64;UBERON:0003075,1.47e-10,64;UBERON:0007284,1.47e-10,64;UBERON:0002420,1.41e-09,8;UBERON:0007245,1.41e-09,8;UBERON:0010009,1.41e-09,8;UBERON:0010011,1.41e-09,8;UBERON:0000454,1.41e-09,8;UBERON:0001948,1.93e-09,5;UBERON:0002315,1.93e-09,5;UBERON:0010371,5.35e-09,73;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0002038,3.14e-07,3;UBERON:0009663,3.14e-07,3;UBERON:0009661,3.14e-07,3;UBERON:0000125,3.14e-07,3;UBERON:0002308,3.14e-07,3;UBERON:0002616,4.31e-07,46;UBERON:0000955,6.50e-07,47;UBERON:0006238,6.50e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.921639199537461,0.791317726381163,1.00636407962651,2.08365348222704,0.279182999001381,2.25105044012672,1.06958773443767,1.17851434189467,2.98980529678116,3.91438836233131,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,2.04946557908083,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,0.376963056338593,0.695297280769106,0.255715457330331,1.66230435647648,0.162241263067758,0.305518091550949,0.248813941220186,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.896796041993948,0.468508622798644,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0.804820204198858,0,0,0,0,0.292399974850665,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0,0,0.642202359951168,1.40654023910644,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0,0.65954501176592,0.322928853391811,0.301564624640779,0.238744688006273,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:47885301..47885305,- | |||
|id=chr12:47885301..47885305,- | |||
|ontology_enrichment_celltype=CL:0000117!5.37e-07!23;CL:0000337!5.37e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-23,23;CL:0000337,2.90e-23,23;CL:0000540,1.01e-15,33;CL:0000047,1.01e-15,33;CL:0000031,1.01e-15,33;CL:0000404,1.01e-15,33;CL:0002612,2.14e-15,3;CL:0000120,8.81e-15,3;CL:0000393,4.75e-13,39;CL:0000211,4.75e-13,39;CL:0002319,1.11e-11,43;CL:0000221,2.24e-11,44;CL:0000133,2.24e-11,44;CL:0002614,3.14e-07,3;CL:0002613,4.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.31e-11!63;UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0002346!3.97e-11!71;UBERON:0003075!3.97e-11!71;UBERON:0007284!3.97e-11!71;UBERON:0001049!5.37e-10!52;UBERON:0005068!5.37e-10!52;UBERON:0006241!5.37e-10!52;UBERON:0007135!5.37e-10!52;UBERON:0001017!5.69e-10!73;UBERON:0005743!5.69e-10!73;UBERON:0000073!3.25e-09!75;UBERON:0001016!3.25e-09!75;UBERON:0000955!6.59e-09!50;UBERON:0006238!6.59e-09!50;UBERON:0002616!1.09e-08!49;UBERON:0003056!1.38e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.13e-19,12;UBERON:0003057,6.13e-19,12;UBERON:0001017,2.48e-16,73;UBERON:0001016,7.87e-16,75;UBERON:0002257,2.14e-15,3;UBERON:0001049,1.80e-13,52;UBERON:0005068,1.80e-13,52;UBERON:0006241,1.80e-13,52;UBERON:0007135,1.80e-13,52;UBERON:0002240,3.57e-13,6;UBERON:0005174,3.57e-13,6;UBERON:0001137,3.57e-13,6;UBERON:0000073,7.30e-13,54;UBERON:0004121,5.79e-12,95;UBERON:0000924,5.79e-12,95;UBERON:0006601,5.79e-12,95;UBERON:0002950,2.72e-11,4;UBERON:0001891,2.72e-11,4;UBERON:0009616,2.72e-11,4;UBERON:0010286,2.72e-11,4;UBERON:0002346,1.47e-10,64;UBERON:0003075,1.47e-10,64;UBERON:0007284,1.47e-10,64;UBERON:0002420,1.41e-09,8;UBERON:0007245,1.41e-09,8;UBERON:0010009,1.41e-09,8;UBERON:0010011,1.41e-09,8;UBERON:0000454,1.41e-09,8;UBERON:0001948,1.93e-09,5;UBERON:0002315,1.93e-09,5;UBERON:0010371,5.35e-09,73;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0002038,3.14e-07,3;UBERON:0009663,3.14e-07,3;UBERON:0009661,3.14e-07,3;UBERON:0000125,3.14e-07,3;UBERON:0002308,3.14e-07,3;UBERON:0002616,4.31e-07,46;UBERON:0000955,6.50e-07,47;UBERON:0006238,6.50e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.921639199537461,0.791317726381163,1.00636407962651,2.08365348222704,0.279182999001381,2.25105044012672,1.06958773443767,1.17851434189467,2.98980529678116,3.91438836233131,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,2.04946557908083,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,0.376963056338593,0.695297280769106,0.255715457330331,1.66230435647648,0.162241263067758,0.305518091550949,0.248813941220186,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.896796041993948,0.468508622798644,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0.804820204198858,0,0,0,0,0.292399974850665,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0,0.81931657357869,0.172684981865896,0.433947175744535,0,0,0,0,0.642202359951168,1.40654023910644,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0,0.65954501176592,0.322928853391811,0.301564624640779,0.238744688006273,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0,0,0.724752362478018,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.915758121336325,0.428736758158132,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.37456602987953,0.448176066834085,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,1.02860775715625,0,0.476872379894642,0.436039249896986,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.578719832943424,0,0.701794825336225,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr12:47885301..47885305,- | |||
}} |
Revision as of 22:52, 12 September 2013
Short description: | p@chr12:47885301..47885305, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47885301..47885305, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.90e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.90e-23 | 23 |
neuron | 1.01e-15 | 33 |
neuronal stem cell | 1.01e-15 | 33 |
neuroblast | 1.01e-15 | 33 |
electrically signaling cell | 1.01e-15 | 33 |
neuron of the ventral spinal cord | 2.14e-15 | 3 |
granule cell | 8.81e-15 | 3 |
electrically responsive cell | 4.75e-13 | 39 |
electrically active cell | 4.75e-13 | 39 |
neural cell | 1.11e-11 | 43 |
ectodermal cell | 2.24e-11 | 44 |
neurectodermal cell | 2.24e-11 | 44 |
neuron of the substantia nigra | 3.14e-07 | 3 |
striatum neuron | 4.48e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.