FFCP PHASE1:Hg19::chr4:156588081..156588093,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4685|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000515602_5end|description=CAGE_peak_9_at_GUCY1A3_5end|id=chr4:156588081..156588093,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;7.98e-13;5!CL:0000784;6.01e-12;3|ontology_enrichment_celltype_v019_2=CL:0000784,8.65e-12,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:169!3.95e-07!6|ontology_enrichment_disease_v019=DOID:169;1.08e-10;6|ontology_enrichment_disease_v019_2=DOID:169,1.47e-10,6|ontology_enrichment_uberon=UBERON:0007023!2.53e-33!115;UBERON:0001049!1.21e-21!57;UBERON:0005068!1.21e-21!57;UBERON:0006241!1.21e-21!57;UBERON:0007135!1.21e-21!57;UBERON:0000073!4.90e-20!94;UBERON:0001016!4.90e-20!94;UBERON:0002780!9.56e-20!41;UBERON:0001890!9.56e-20!41;UBERON:0006240!9.56e-20!41;UBERON:0002020!4.62e-19!34;UBERON:0003528!4.62e-19!34;UBERON:0001893!4.81e-19!34;UBERON:0003080!5.26e-19!42;UBERON:0001017!1.25e-18!82;UBERON:0002791!2.59e-18!33;UBERON:0005743!3.87e-18!86;UBERON:0001869!5.91e-18!32;UBERON:0003075!9.17e-18!86;UBERON:0007284!9.17e-18!86;UBERON:0000955!2.41e-17!69;UBERON:0006238!2.41e-17!69;UBERON:0002616!6.44e-17!59;UBERON:0002619!1.11e-16!22;UBERON:0002346!3.12e-16!90;UBERON:0001950!6.16e-15!20;UBERON:0003056!6.24e-15!61;UBERON:0000956!6.99e-14!25;UBERON:0000203!6.99e-14!25;UBERON:0004121!4.17e-13!169;UBERON:0000924!2.56e-12!173;UBERON:0006601!2.56e-12!173;UBERON:0000153!1.25e-11!129;UBERON:0007811!1.25e-11!129;UBERON:0000033!4.20e-11!123|ontology_enrichment_uberon_v019=UBERON:0000013;7.98e-13;5!UBERON:0002410;7.98e-13;5!UBERON:0000922;3.10e-12;49!UBERON:0003528;3.00e-10;34!UBERON:0002020;3.00e-10;34!UBERON:0002791;1.17e-09;32!UBERON:0001869;1.17e-09;32!UBERON:0002619;1.74e-09;22!UBERON:0000956;3.08e-08;25!UBERON:0000203;3.08e-08;25!UBERON:0001950;3.63e-08;20!UBERON:0002780;4.56e-08;41!UBERON:0001890;4.56e-08;41!UBERON:0001893;1.33e-07;34!UBERON:0000010;3.95e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.16e-12,5;UBERON:0002410,1.16e-12,5;UBERON:0003528,5.72e-11,34;UBERON:0002020,5.72e-11,34;UBERON:0002791,8.61e-10,32;UBERON:0001869,8.61e-10,32;UBERON:0002619,1.84e-09,22;UBERON:0001016,3.99e-09,89;UBERON:0001893,4.04e-09,34;UBERON:0002780,7.67e-09,41;UBERON:0001890,7.67e-09,41;UBERON:0003080,7.67e-09,41;UBERON:0006240,7.67e-09,41;UBERON:0000956,3.24e-08,25;UBERON:0000203,3.24e-08,25;UBERON:0001950,3.25e-08,20;UBERON:0000073,1.30e-07,53;UBERON:0002616,1.30e-07,53;UBERON:0000955,1.58e-07,68;UBERON:0006238,1.58e-07,68;UBERON:0001049,4.37e-07,56;UBERON:0005068,4.37e-07,56;UBERON:0006241,4.37e-07,56;UBERON:0007135,4.37e-07,56;UBERON:0000010,4.81e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.61130724598361,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.43917392846563,0.392937226493138,0,0,0,0,0,1.19245312152671,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0,0.640944426764839,0,0.245040215981032,0,1.58696134274089,0.426851060090485,0.318852545457645,1.1974762285969,1.1490322207942,0.423347165447766,0,1.12318871245384,0,0,2.50634477090067,2.20079311142084,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0.47748896947538,0,0,0,1.40669416410513,0,0,0,0.19924798825107,0.828851746593443,1.51159648712566,0,0.123084805461069,0,0.629078458031288,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,1.39935999993913,0,0.455173793141999,0,0,0.689486746482929,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4685 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000515602_5end | |||
|description=CAGE_peak_9_at_GUCY1A3_5end | |||
|id=chr4:156588081..156588093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.98e-13;5!CL:0000784;6.01e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.65e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!3.95e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.08e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.47e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-33!115;UBERON:0001049!1.21e-21!57;UBERON:0005068!1.21e-21!57;UBERON:0006241!1.21e-21!57;UBERON:0007135!1.21e-21!57;UBERON:0000073!4.90e-20!94;UBERON:0001016!4.90e-20!94;UBERON:0002780!9.56e-20!41;UBERON:0001890!9.56e-20!41;UBERON:0006240!9.56e-20!41;UBERON:0002020!4.62e-19!34;UBERON:0003528!4.62e-19!34;UBERON:0001893!4.81e-19!34;UBERON:0003080!5.26e-19!42;UBERON:0001017!1.25e-18!82;UBERON:0002791!2.59e-18!33;UBERON:0005743!3.87e-18!86;UBERON:0001869!5.91e-18!32;UBERON:0003075!9.17e-18!86;UBERON:0007284!9.17e-18!86;UBERON:0000955!2.41e-17!69;UBERON:0006238!2.41e-17!69;UBERON:0002616!6.44e-17!59;UBERON:0002619!1.11e-16!22;UBERON:0002346!3.12e-16!90;UBERON:0001950!6.16e-15!20;UBERON:0003056!6.24e-15!61;UBERON:0000956!6.99e-14!25;UBERON:0000203!6.99e-14!25;UBERON:0004121!4.17e-13!169;UBERON:0000924!2.56e-12!173;UBERON:0006601!2.56e-12!173;UBERON:0000153!1.25e-11!129;UBERON:0007811!1.25e-11!129;UBERON:0000033!4.20e-11!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.98e-13;5!UBERON:0002410;7.98e-13;5!UBERON:0000922;3.10e-12;49!UBERON:0003528;3.00e-10;34!UBERON:0002020;3.00e-10;34!UBERON:0002791;1.17e-09;32!UBERON:0001869;1.17e-09;32!UBERON:0002619;1.74e-09;22!UBERON:0000956;3.08e-08;25!UBERON:0000203;3.08e-08;25!UBERON:0001950;3.63e-08;20!UBERON:0002780;4.56e-08;41!UBERON:0001890;4.56e-08;41!UBERON:0001893;1.33e-07;34!UBERON:0000010;3.95e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.16e-12,5;UBERON:0002410,1.16e-12,5;UBERON:0003528,5.72e-11,34;UBERON:0002020,5.72e-11,34;UBERON:0002791,8.61e-10,32;UBERON:0001869,8.61e-10,32;UBERON:0002619,1.84e-09,22;UBERON:0001016,3.99e-09,89;UBERON:0001893,4.04e-09,34;UBERON:0002780,7.67e-09,41;UBERON:0001890,7.67e-09,41;UBERON:0003080,7.67e-09,41;UBERON:0006240,7.67e-09,41;UBERON:0000956,3.24e-08,25;UBERON:0000203,3.24e-08,25;UBERON:0001950,3.25e-08,20;UBERON:0000073,1.30e-07,53;UBERON:0002616,1.30e-07,53;UBERON:0000955,1.58e-07,68;UBERON:0006238,1.58e-07,68;UBERON:0001049,4.37e-07,56;UBERON:0005068,4.37e-07,56;UBERON:0006241,4.37e-07,56;UBERON:0007135,4.37e-07,56;UBERON:0000010,4.81e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.61130724598361,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.43917392846563,0.392937226493138,0,0,0,0,0,1.19245312152671,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0,0.640944426764839,0,0.245040215981032,0,1.58696134274089,0.426851060090485,0.318852545457645,1.1974762285969,1.1490322207942,0.423347165447766,0,1.12318871245384,0,0,2.50634477090067,2.20079311142084,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0.47748896947538,0,0,0,1.40669416410513,0,0,0,0.19924798825107,0.828851746593443,1.51159648712566,0,0.123084805461069,0,0.629078458031288,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,1.39935999993913,0,0.455173793141999,0,0,0.689486746482929,0.874813840149763,0.173624994933292,2.65722415744152,0.723578631752448,0,0.221158519862449,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.794682894901893,0.210998064528027,0,0,0,1.99052386215701,0.530745387020035,3.05515072466813,0,0,0,0.539209063845416,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,2.41981432097328,2.75465485467441,0.63186579628488,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,1.26621591911757,0.391102765469606,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0,0.916641696046735,0,0.199679000498991,0.858452096273142,0.446342914883745,2.14987111957524,0,0,0,0,0,0.590564889088493,0.169346664131569,0.795229689809303,1.0896272488926,0,0.137539436597234,0,0,0.77380195455795,0.91124334987037,0,1.02447419488958,1.10154635083496,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,1.0342636508924,0.39669780522807,0,0,0.213574825135389,1.25763444079733,2.89967338743037,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.3755727921195,0,0.221858103073705,0.372578417648301,1.798532254171,0.37494122388632,0,0,0,0.936669811613763,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17420431216208,2.47997066212368,0.314531883711793,2.62103131660833,0,0,0,1.11728983594649,0,0.315446980005013,0,0,0,0.578063025868136,0,0.478901577171454,0.205116364240755,3.52900374710405,0.553258019713743,0.807378228159255,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0.295712172434091,0.540300676947157,0.781078098613847,1.2401207790071,0.317079050969534,6.01672289920042,0.548257766857182,0.992422356778588,0,0,0.535701835878287,1.3451348888753,0,0,0,0.460935950223117,0,0.747667062745149,0.591954962065642,0,0.778619813244484,0.549451649953598,0.471346769748006,0,5.47895232305697,0.215927591218621,0,1.78691360441641,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0.365753774946808,0,0.307988420568741,0,1.45713297917742,0.467878926924211,0,0.118920090777569,0.33883824611688,3.18827498561744,0.603851374266694,0.463044948647668,1.96703604453562,2.35158648180761,0,0.707029641304878,0.981542335574726,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.257831551894309,0,0.178553938605658,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0.475940431336403,3.05445483238264,0.5290268405154,0,0,0,0,0.218531143927391,1.26698501011437,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0.23806443146374,1.0980114672121,0.31037357147929,0,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| |||
|short_description=p9@GUCY1A3 | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p9@GUCY1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GUCY1A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000515602_5end |
EntrezGene: | GUCY1A3 |
HGNC: | 4685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.65e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.16e-12 | 5 |
autonomic nervous system | 1.16e-12 | 5 |
brain grey matter | 5.72e-11 | 34 |
gray matter | 5.72e-11 | 34 |
regional part of telencephalon | 8.61e-10 | 32 |
cerebral hemisphere | 8.61e-10 | 32 |
regional part of cerebral cortex | 1.84e-09 | 22 |
nervous system | 3.99e-09 | 89 |
telencephalon | 4.04e-09 | 34 |
regional part of forebrain | 7.67e-09 | 41 |
forebrain | 7.67e-09 | 41 |
anterior neural tube | 7.67e-09 | 41 |
future forebrain | 7.67e-09 | 41 |
cerebral cortex | 3.24e-08 | 25 |
pallium | 3.24e-08 | 25 |
neocortex | 3.25e-08 | 20 |
regional part of nervous system | 1.30e-07 | 53 |
regional part of brain | 1.30e-07 | 53 |
brain | 1.58e-07 | 68 |
future brain | 1.58e-07 | 68 |
neural tube | 4.37e-07 | 56 |
neural rod | 4.37e-07 | 56 |
future spinal cord | 4.37e-07 | 56 |
neural keel | 4.37e-07 | 56 |
peripheral nervous system | 4.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.47e-10 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.