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FFCP PHASE1:Mm9::chr16:15594602..15594624,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=100503412,70620|HGNC=|MCL_coexpression_id=60|UniProt=Q9D2M8,Q4VBX4,B7ZBY6,Q9CZY3|association_with_transcript=0bp_to_ENSMUST00000115777,NM_001159351,NM_023585,uc007yhp.2,uc007yhq.2_5end|description=CAGE_peak_1_at_Gm6565_5end,CAGE_peak_1_at_Ube2v2_5end|id=chr16:15594602..15594624,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.16e-11!63;UBERON:0002346!5.69e-10!71;UBERON:0003075!5.69e-10!71;UBERON:0007284!5.69e-10!71;UBERON:0004121!2.30e-09!102;UBERON:0000924!2.30e-09!102;UBERON:0006601!2.30e-09!102;UBERON:0000073!3.09e-09!75;UBERON:0001016!3.09e-09!75;UBERON:0001049!4.25e-09!52;UBERON:0005068!4.25e-09!52;UBERON:0006241!4.25e-09!52;UBERON:0007135!4.25e-09!52;UBERON:0002020!6.01e-09!34;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0001017!1.72e-08!73;UBERON:0005743!1.72e-08!73;UBERON:0002616!2.67e-08!49;UBERON:0003056!3.62e-08!49;UBERON:0000153!9.90e-08!94;UBERON:0007811!1.15e-07!86;UBERON:0002791!3.77e-07!29;UBERON:0003528!3.77e-07!29;UBERON:0001893!3.77e-07!29;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.39e-11,64;UBERON:0003075,1.39e-11,64;UBERON:0007284,1.39e-11,64;UBERON:0010371,1.89e-11,73;UBERON:0004121,1.01e-10,95;UBERON:0000924,1.01e-10,95;UBERON:0006601,1.01e-10,95;UBERON:0000073,3.32e-10,54;UBERON:0001016,1.40e-09,75;UBERON:0001049,3.04e-09,52;UBERON:0005068,3.04e-09,52;UBERON:0006241,3.04e-09,52;UBERON:0007135,3.04e-09,52;UBERON:0002020,5.86e-09,34;UBERON:0001017,8.10e-09,73;UBERON:0003056,3.08e-08,49;UBERON:0000955,2.00e-07,47;UBERON:0006238,2.00e-07,47;UBERON:0003528,3.75e-07,29;UBERON:0002791,3.75e-07,29;UBERON:0001893,3.75e-07,29;UBERON:0002021,4.23e-07,10;UBERON:0000411,4.23e-07,10;UBERON:0001950,4.23e-07,10;UBERON:0002616,4.68e-07,46|phase1_expression=3.36312578920067,2.09385244583617,1.81999695755814,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,0.387369970324729,0.985521055061667,1.17032263160997,4.79410311031414,3.82906363177615,0.513602189793617,0.524522414513984,0.666219523631325,2.63217847606774,1.39912375625629,0.473193248037357,0.685572168028694,1.69755860719212,4.25216450755349,1.29078236561151,2.87319768052829,1.75991665072747,1.37645568640302,2.29692785646008,0.430761996159075,1.50829862880122,0.570070258369122,0.756090389279792,0.886922042621219,2.54012269383853,0.61506478758457,15.8481681015439,0.866554859253824,1.49611180822643,1.02084678131185,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,3.02152363141385,2.73717714292689,3.30384153891027,1.56478268869608,0.218025156380447,0.659058548203415,1.94429899074283,1.39986421625363,0,1.00669563634642,0,0.336093799142464,3.60163210450326,1.43266719969378,2.06268836910977,2.42779753031517,1.05798195854407,1.90149421051854,0.677689064138264,0,0,0,0,0,0.384218305321555,2.38486108309499,0.540023753326763,1.05162480675691,3.71346279724945,2.87129103237098,3.1847607795888,1.62937300731002,1.83843757322004,5.50579404996943,8.55505165170758,9.67721159514334,2.2420668914133,2.74462930807229,3.12548022334056,5.862842979029,11.2552522006336,5.80633341551878,5.30331453852602,9.11178757114259,4.47358669980721,7.19398836665249,3.92972112555285,0.579728977403356,0,1.3599426674155,2.15881276655127,3.89865850468601,1.79210754838934,2.10666630197628,7.49893419343454,8.05336614268893,4.59341446863442,2.95771181531029,2.56652954828636,2.54805239706646,0,1.29894624606728,1.77351905832569,3.53867111510348,2.05530983494308,1.55362730188303,1.63286352971307,2.94925055502431,2.13125834818499,1.15307748628029,1.95939432718409,1.64624189989987,1.13099932196708,0.741584903203122,1.44599356919912,0.884610551949874,2.42650274921114,1.54589062922275,1.45462575940567,1.86391761218122,3.80615036115011,3.77004072264219,0.766371165625774,2.27648736561249,2.99951365496704,3.43089613097275,7.48953197024113,4.57500602818627,5.15182843662744,8.8650403298061,7.16003280524926,7.2725815595846,8.27430441645564,1.93494791315601,0.248813941220186,2.0217820674694,2.73574412652416,3.12289063110489,4.13823787980251,2.52086981727489,4.37043971723574,2.72145996605311,3.97152532883034,3.46696380870997,2.84573707812917,2.37124792226126,3.02569728268511,1.93546236580344,1.97276159184817,2.22437799380478,2.089512999133,3.08673204611915,3.18454826909589,3.51106593656617,4.88961023517959,1.42081749697796,2.27838349789052,2.34526059981096,1.62055855314913,1.65721314909647,0.590292695242212,1.23413690309903,1.39520366850245,1.60964040839772,0.817357396570186,1.31647879930784,1.31333971263276,0.972825714550269,1.60819986167866,0.878200461164203,0.536825675041487,5.67782861123144,6.48299057989492,0.330418782983798,1.05780226665418,4.26576501070468,2.78684006232526,4.25262622362908,1.00841762311671,1.77902435075896,0.951128130562796,0.474529061544512,1.64698954724011,1.25667604400135,0.795825888164603,1.169784522714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|EntrezGene=100503412,70620
|HGNC=
|MCL_coexpression_id=60
|UniProt=Q9D2M8,Q4VBX4,B7ZBY6,Q9CZY3
|association_with_transcript=0bp_to_ENSMUST00000115777,NM_001159351,NM_023585,uc007yhp.2,uc007yhq.2_5end
|description=CAGE_peak_1_at_Gm6565_5end,CAGE_peak_1_at_Ube2v2_5end
|id=chr16:15594602..15594624,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.16e-11!63;UBERON:0002346!5.69e-10!71;UBERON:0003075!5.69e-10!71;UBERON:0007284!5.69e-10!71;UBERON:0004121!2.30e-09!102;UBERON:0000924!2.30e-09!102;UBERON:0006601!2.30e-09!102;UBERON:0000073!3.09e-09!75;UBERON:0001016!3.09e-09!75;UBERON:0001049!4.25e-09!52;UBERON:0005068!4.25e-09!52;UBERON:0006241!4.25e-09!52;UBERON:0007135!4.25e-09!52;UBERON:0002020!6.01e-09!34;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0001017!1.72e-08!73;UBERON:0005743!1.72e-08!73;UBERON:0002616!2.67e-08!49;UBERON:0003056!3.62e-08!49;UBERON:0000153!9.90e-08!94;UBERON:0007811!1.15e-07!86;UBERON:0002791!3.77e-07!29;UBERON:0003528!3.77e-07!29;UBERON:0001893!3.77e-07!29;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.39e-11,64;UBERON:0003075,1.39e-11,64;UBERON:0007284,1.39e-11,64;UBERON:0010371,1.89e-11,73;UBERON:0004121,1.01e-10,95;UBERON:0000924,1.01e-10,95;UBERON:0006601,1.01e-10,95;UBERON:0000073,3.32e-10,54;UBERON:0001016,1.40e-09,75;UBERON:0001049,3.04e-09,52;UBERON:0005068,3.04e-09,52;UBERON:0006241,3.04e-09,52;UBERON:0007135,3.04e-09,52;UBERON:0002020,5.86e-09,34;UBERON:0001017,8.10e-09,73;UBERON:0003056,3.08e-08,49;UBERON:0000955,2.00e-07,47;UBERON:0006238,2.00e-07,47;UBERON:0003528,3.75e-07,29;UBERON:0002791,3.75e-07,29;UBERON:0001893,3.75e-07,29;UBERON:0002021,4.23e-07,10;UBERON:0000411,4.23e-07,10;UBERON:0001950,4.23e-07,10;UBERON:0002616,4.68e-07,46
|phase1_expression=3.36312578920067,2.09385244583617,1.81999695755814,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,0.387369970324729,0.985521055061667,1.17032263160997,4.79410311031414,3.82906363177615,0.513602189793617,0.524522414513984,0.666219523631325,2.63217847606774,1.39912375625629,0.473193248037357,0.685572168028694,1.69755860719212,4.25216450755349,1.29078236561151,2.87319768052829,1.75991665072747,1.37645568640302,2.29692785646008,0.430761996159075,1.50829862880122,0.570070258369122,0.756090389279792,0.886922042621219,2.54012269383853,0.61506478758457,15.8481681015439,0.866554859253824,1.49611180822643,1.02084678131185,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,3.02152363141385,2.73717714292689,3.30384153891027,1.56478268869608,0.218025156380447,0.659058548203415,1.94429899074283,1.39986421625363,0,1.00669563634642,0,0.336093799142464,3.60163210450326,1.43266719969378,2.06268836910977,2.42779753031517,1.05798195854407,1.90149421051854,0.677689064138264,0,0,0,0,0,0.384218305321555,2.38486108309499,0.540023753326763,1.05162480675691,3.71346279724945,2.87129103237098,3.1847607795888,1.62937300731002,1.83843757322004,5.50579404996943,8.55505165170758,9.67721159514334,2.2420668914133,2.74462930807229,3.12548022334056,5.862842979029,11.2552522006336,5.80633341551878,5.30331453852602,9.11178757114259,4.47358669980721,7.19398836665249,3.92972112555285,0.579728977403356,0,1.3599426674155,2.15881276655127,3.89865850468601,1.79210754838934,2.10666630197628,7.49893419343454,8.05336614268893,4.59341446863442,2.95771181531029,2.56652954828636,2.54805239706646,0,1.29894624606728,1.77351905832569,3.53867111510348,2.05530983494308,1.55362730188303,1.63286352971307,2.94925055502431,2.13125834818499,1.15307748628029,1.95939432718409,1.64624189989987,1.13099932196708,0.741584903203122,1.44599356919912,0.884610551949874,2.42650274921114,1.54589062922275,1.45462575940567,1.86391761218122,3.80615036115011,3.77004072264219,0.766371165625774,2.27648736561249,2.99951365496704,3.43089613097275,7.48953197024113,4.57500602818627,5.15182843662744,8.8650403298061,7.16003280524926,7.2725815595846,8.27430441645564,1.93494791315601,0.248813941220186,2.0217820674694,2.73574412652416,3.12289063110489,4.13823787980251,2.52086981727489,4.37043971723574,2.72145996605311,3.97152532883034,3.46696380870997,2.84573707812917,2.37124792226126,3.02569728268511,1.93546236580344,1.97276159184817,2.22437799380478,2.089512999133,3.08673204611915,3.18454826909589,3.51106593656617,4.88961023517959,1.42081749697796,2.27838349789052,2.34526059981096,1.62055855314913,1.65721314909647,0.590292695242212,1.23413690309903,1.39520366850245,1.60964040839772,0.817357396570186,1.31647879930784,1.31333971263276,0.972825714550269,1.60819986167866,0.878200461164203,0.536825675041487,5.67782861123144,6.48299057989492,0.330418782983798,1.05780226665418,4.26576501070468,2.78684006232526,4.25262622362908,1.00841762311671,1.77902435075896,0.951128130562796,0.474529061544512,1.64698954724011,1.25667604400135,0.795825888164603,1.16978452271472,0.898819408654221,2.16138049874694,0.199141273254367,0.379335801906163,2.39921876480431,5.63538678365402,2.44381593414377,1.93952487167626,2.10407459670956,0.885311519739602,1.47610147979602,0.784993639206874,0.616985819609003,1.48226313543574,3.83743743147016,1.57247196090562,4.04751802292737,0.811440485554012,1.92941727801933,1.52775511068852,1.43848068725405,1.94562272130042,2.47105271869273,1.43768206527355,0.372140947668503,1.87222603868736,1.51547326768267,1.25578189465339,0.964887042726734,2.03228509183265,4.54779388249163,5.37784422258685,3.22515662972857,3.75504397261603,3.51763140627813,3.33261097240419,1.36593553500459,2.20689201748667,2.21464689648775,2.55127629851979,1.3109065177259,0.863424909329478,1.44649058581512,0,0.54390568381871,0,1.10374698521893,9.63303539926752,9.14251155419185,2.62295912602681,2.27223834483936,2.52406575533005,5.46614242015294,1.93881057959519,1.67278158566786,3.11918143715352,1.98153571552183,2.42886421004937,3.50707029493574,1.58115111178609,4.81981974632711,1.41940085208269,0.534196811001766,1.79175655288934,1.48473110675282,0,1.21390318077491,2.72091201268276,1.32023555829129,0.590603785761546,1.84461088766356,0.775284879504663,3.63533729477506,1.06949213515416,1.58018378967908,1.05418608574999,2.06271086496374,1.70219802876894,4.50152735078276,0.258717367565509,1.28602221018955,2.6601035046341,1.42695054081656,1.48094118541909,1.2178597964584,2.3467170806371,1.90648863777438,0.882113592219848,2.63818004706368,2.26050197374268,3.19658502119226,2.74556391207214,2.62625439592098,1.1659233465194,8.90041449650446,1.19609616558497,2.06386867963222,3.88908507476395,2.26042148405629,1.0935538217682,3.20289442489132,2.03974115992626,1.25956307091292,2.07299960706636,0.954670618015114,3.47969592939249,3.45643094115643,2.80813886136683,4.18176592028937,2.18362563746178,1.21377911746339,0.661227645802687,2.09404753587224,1.16653475962614,1.24267862617385,22.5477175473676,5.98066184175915,2.15096037594227,1.55560950675238,2.58319646955462,2.36538575687089,2.11243029562357,2.73429208172295,5.87212328783981,2.89900944991207,14.977560325409,1.58005560314089,1.41907650703115,2.15693010046137,2.46849563657811,2.14832034800978,3.3775830312815,1.68273629327956,2.36303243479324,1.81739609906666,1.82896335972,2.72230699869469,1.46186821109629,1.44317762460494,1.63627663054197,2.94749498699775,7.10355050797007,4.57540668708326,5.03653849092235,2.89784391048286,1.68914227906064,2.19781949120718,2.14368379079066,1.00314420807073,7.90652579663893,8.74617949363636,13.7494923225455,5.32744865265431,6.16574267793578,6.0431511791176,6.75022500231806,6.75481804836331,6.34399372577886,6.73088405277366,4.77421798887213,3.99024873401031,3.41467211508268,3.16038732188782,2.72497111416377,3.12533964365024,2.44471400581777,2.06035057238894,1.28367683836726,2.77966932940177,3.29523089857312,2.45214243801899,2.71560371662659,2.62503124859964,2.64203157195821,4.76293691283074,2.0859178670074,1.92909220463705,3.70877310722976,2.79677948255355,1.71434626192708,2.8396128985494,2.14592570952589,1.88950341622027,1.88218760830661,3.21535509988371,3.29270351170991,2.63069711437843,3.66671107383827,3.92799590160417,2.37270036248348,2.26560309463796,2.86461730218783,1.85924209423159,1.54325288784913,1.49886346762768,1.40358965067245,2.14871054048298,0.956441660344217,1.54413993383661,2.08681052058379
|short_description=p1@Gm6565,p1@Ube2v2
}}

Revision as of 12:01, 13 September 2013

Short description:p1@Gm6565, p1@Ube2v2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm6565_5end, CAGE_peak_1_at_Ube2v2_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000115777, NM_001159351, NM_023585, uc007yhp.2, uc007yhq.2_5end
EntrezGene:100503412,70620
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Gm6565p1@Ube2v2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D97.19
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A39.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H33.20
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G522.55
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D95.87
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E214.98
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
neurectoderm1.39e-1164
neural plate1.39e-1164
presumptive neural plate1.39e-1164
ecto-epithelium1.89e-1173
ectoderm-derived structure1.01e-1095
ectoderm1.01e-1095
presumptive ectoderm1.01e-1095
regional part of nervous system3.32e-1054
nervous system1.40e-0975
neural tube3.04e-0952
neural rod3.04e-0952
future spinal cord3.04e-0952
neural keel3.04e-0952
gray matter5.86e-0934
central nervous system8.10e-0973
pre-chordal neural plate3.08e-0849
brain2.00e-0747
future brain2.00e-0747
brain grey matter3.75e-0729
regional part of telencephalon3.75e-0729
telencephalon3.75e-0729
occipital lobe4.23e-0710
visual cortex4.23e-0710
neocortex4.23e-0710
regional part of brain4.68e-0746







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.