FFCP PHASE1:Mm9::chr18:43367333..43367354,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100047004,269019|HGNC=|MCL_coexpression_id=107|UniProt=Q8BGW6|association_with_transcript=0bp_to_ENSMUST00000045477,NM_178749,uc008eue.1,uc012bcj.1_5end|description=CAGE_peak_2_at_LOC100047004_5end,CAGE_peak_2_at_Stk32a_5end|id=chr18:43367333..43367354,+|ontology_enrichment_celltype=CL:0002319!4.47e-22!43;CL:0000221!5.37e-22!44;CL:0000133!5.37e-22!44;CL:0000055!1.89e-16!50;CL:0000540!1.54e-15!33;CL:0000047!1.54e-15!33;CL:0000031!1.54e-15!33;CL:0000404!1.54e-15!33;CL:0000393!3.59e-11!39;CL:0000211!3.59e-11!39;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0000107!4.04e-09!9;CL:0002321!2.37e-08!70;CL:0000220!2.37e-08!70;CL:0000333!1.61e-07!10;CL:0000095!1.61e-07!10;CL:0000243!1.61e-07!10;CL:0000123!1.61e-07!10;CL:0000125!1.61e-07!10;CL:0000030!1.61e-07!10;CL:0000339!1.61e-07!10;CL:0002453!4.60e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,9.53e-30,43;CL:0000221,6.55e-29,44;CL:0000133,6.55e-29,44;CL:0000540,5.80e-21,33;CL:0000047,5.80e-21,33;CL:0000031,5.80e-21,33;CL:0000404,5.80e-21,33;CL:0000107,3.01e-20,9;CL:0000393,6.31e-17,39;CL:0000211,6.31e-17,39;CL:0002321,1.43e-15,70;CL:0002453,3.62e-12,8;CL:0000333,1.69e-09,10;CL:0000095,1.69e-09,10;CL:0000243,1.69e-09,10;CL:0000123,1.69e-09,10;CL:0000125,1.69e-09,10;CL:0000030,1.69e-09,10;CL:0000339,1.69e-09,10;CL:0000128,9.11e-09,6;CL:0000126,9.11e-09,6;CL:0000127,9.11e-09,6;CL:0000117,7.25e-08,23;CL:0000337,7.25e-08,23;CL:0000723,1.60e-07,91;CL:0000048,1.60e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.34e-28!75;UBERON:0001016!2.34e-28!75;UBERON:0001017!1.56e-27!73;UBERON:0005743!1.56e-27!73;UBERON:0004121!1.72e-27!102;UBERON:0000924!1.72e-27!102;UBERON:0006601!1.72e-27!102;UBERON:0002346!2.36e-20!71;UBERON:0003075!2.36e-20!71;UBERON:0007284!2.36e-20!71;UBERON:0001049!2.11e-15!52;UBERON:0005068!2.11e-15!52;UBERON:0006241!2.11e-15!52;UBERON:0007135!2.11e-15!52;UBERON:0000955!4.41e-14!50;UBERON:0006238!4.41e-14!50;UBERON:0002616!8.38e-14!49;UBERON:0000033!6.44e-13!63;UBERON:0000010!1.75e-09!11;UBERON:0002410!4.04e-09!9;UBERON:0003076!9.48e-09!12;UBERON:0003057!9.48e-09!12;UBERON:0003080!1.12e-08!40;UBERON:0003056!1.61e-08!49;UBERON:0002780!3.25e-08!39;UBERON:0001890!3.25e-08!39;UBERON:0006240!3.25e-08!39;UBERON:0002020!8.96e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-32,73;UBERON:0001016,1.35e-31,75;UBERON:0004121,2.49e-26,95;UBERON:0000924,2.49e-26,95;UBERON:0006601,2.49e-26,95;UBERON:0002410,3.01e-20,9;UBERON:0000010,3.52e-16,11;UBERON:0000073,1.57e-14,54;UBERON:0002346,1.92e-14,64;UBERON:0003075,1.92e-14,64;UBERON:0007284,1.92e-14,64;UBERON:0001049,1.73e-12,52;UBERON:0005068,1.73e-12,52;UBERON:0006241,1.73e-12,52;UBERON:0007135,1.73e-12,52;UBERON:0003076,5.34e-12,12;UBERON:0003057,5.34e-12,12;UBERON:0010371,6.98e-12,73;UBERON:0010314,4.88e-09,92;UBERON:0002240,4.30e-08,6;UBERON:0005174,4.30e-08,6;UBERON:0001137,4.30e-08,6;UBERON:0002616,6.18e-08,46;UBERON:0000011,6.76e-08,3;UBERON:0000013,9.11e-08,3;UBERON:0010313,9.11e-08,3;UBERON:0002342,9.11e-08,3;UBERON:0002005,9.11e-08,3;UBERON:0005428,9.11e-08,3;UBERON:0005062,9.11e-08,3;UBERON:0002950,9.49e-08,4;UBERON:0001891,9.49e-08,4;UBERON:0009616,9.49e-08,4;UBERON:0010286,9.49e-08,4;UBERON:0000955,1.09e-07,47;UBERON:0006238,1.09e-07,47;UBERON:0011216,8.81e-07,194|phase1_expression=0,0,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,4.44521471421742,3.69038872550742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.18025156380447,2.63623419281366,4.6663175777828,3.91961980551015,11.5002051491977,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,2.39680088414724,3.84218305321555,0.622137673850866,0.270011876663381,1.05162480675691,1.71390590642282,2.20868540951614,0.367472397644862,0.287536413054709,0,3.30347642998166,1.53224805702225,1.99688493233117,0.659431438650969,0.274462930807229,0.52091337055676,3.90856198601933,1.12552522006336,2.90316670775939,1.17851434189467,2.56269025438385,0.372798891650601,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,1.64624189989987,0.753999547978053,4.6967043869531,0.144599356919912,0,0,0,0,0,4.68449275218475,1.8850203613211,0,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.459804208866946,1.44049703844279,0.150704817835715,0.884474488967262,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0,0,0.210289948564127,0.514523061896422,0,0,0.213288250535234,0,0.38660238396628,0,0,0.570676878337677,0,0.494096864172033,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,1.20149420536089,0.885660887877613,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,2.40825884981688,0.820481806145422,0,0.252470927204373,19.2460013843917,19.1314984705353,25.2045375347375,21.7461606136822,25.3990488453929,19.5322806244294,14.1683745586213,24.5494920645502,21.3455400091123,0.321321316421807,0,0,0.162886959353576,0,0,0.728341908464944,0,0,0.590603785761546,0.614870295887855,0,1.45413491791002,1.06949213515416,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.646793418913773,1.28602221018955,0.709360934569094,1.07021290561242,0.987294123612726,1.2178597964584,0.23467170806371,0,0.661585194164886,0,0,0,0,0,0,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.578719832943424,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p2@LOC100047004,p2@Stk32a}} | ||
|EntrezGene=100047004,269019 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=Q8BGW6 | |||
|association_with_transcript=0bp_to_ENSMUST00000045477,NM_178749,uc008eue.1,uc012bcj.1_5end | |||
|description=CAGE_peak_2_at_LOC100047004_5end,CAGE_peak_2_at_Stk32a_5end | |||
|id=chr18:43367333..43367354,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.47e-22!43;CL:0000221!5.37e-22!44;CL:0000133!5.37e-22!44;CL:0000055!1.89e-16!50;CL:0000540!1.54e-15!33;CL:0000047!1.54e-15!33;CL:0000031!1.54e-15!33;CL:0000404!1.54e-15!33;CL:0000393!3.59e-11!39;CL:0000211!3.59e-11!39;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0000107!4.04e-09!9;CL:0002321!2.37e-08!70;CL:0000220!2.37e-08!70;CL:0000333!1.61e-07!10;CL:0000095!1.61e-07!10;CL:0000243!1.61e-07!10;CL:0000123!1.61e-07!10;CL:0000125!1.61e-07!10;CL:0000030!1.61e-07!10;CL:0000339!1.61e-07!10;CL:0002453!4.60e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.53e-30,43;CL:0000221,6.55e-29,44;CL:0000133,6.55e-29,44;CL:0000540,5.80e-21,33;CL:0000047,5.80e-21,33;CL:0000031,5.80e-21,33;CL:0000404,5.80e-21,33;CL:0000107,3.01e-20,9;CL:0000393,6.31e-17,39;CL:0000211,6.31e-17,39;CL:0002321,1.43e-15,70;CL:0002453,3.62e-12,8;CL:0000333,1.69e-09,10;CL:0000095,1.69e-09,10;CL:0000243,1.69e-09,10;CL:0000123,1.69e-09,10;CL:0000125,1.69e-09,10;CL:0000030,1.69e-09,10;CL:0000339,1.69e-09,10;CL:0000128,9.11e-09,6;CL:0000126,9.11e-09,6;CL:0000127,9.11e-09,6;CL:0000117,7.25e-08,23;CL:0000337,7.25e-08,23;CL:0000723,1.60e-07,91;CL:0000048,1.60e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.34e-28!75;UBERON:0001016!2.34e-28!75;UBERON:0001017!1.56e-27!73;UBERON:0005743!1.56e-27!73;UBERON:0004121!1.72e-27!102;UBERON:0000924!1.72e-27!102;UBERON:0006601!1.72e-27!102;UBERON:0002346!2.36e-20!71;UBERON:0003075!2.36e-20!71;UBERON:0007284!2.36e-20!71;UBERON:0001049!2.11e-15!52;UBERON:0005068!2.11e-15!52;UBERON:0006241!2.11e-15!52;UBERON:0007135!2.11e-15!52;UBERON:0000955!4.41e-14!50;UBERON:0006238!4.41e-14!50;UBERON:0002616!8.38e-14!49;UBERON:0000033!6.44e-13!63;UBERON:0000010!1.75e-09!11;UBERON:0002410!4.04e-09!9;UBERON:0003076!9.48e-09!12;UBERON:0003057!9.48e-09!12;UBERON:0003080!1.12e-08!40;UBERON:0003056!1.61e-08!49;UBERON:0002780!3.25e-08!39;UBERON:0001890!3.25e-08!39;UBERON:0006240!3.25e-08!39;UBERON:0002020!8.96e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-32,73;UBERON:0001016,1.35e-31,75;UBERON:0004121,2.49e-26,95;UBERON:0000924,2.49e-26,95;UBERON:0006601,2.49e-26,95;UBERON:0002410,3.01e-20,9;UBERON:0000010,3.52e-16,11;UBERON:0000073,1.57e-14,54;UBERON:0002346,1.92e-14,64;UBERON:0003075,1.92e-14,64;UBERON:0007284,1.92e-14,64;UBERON:0001049,1.73e-12,52;UBERON:0005068,1.73e-12,52;UBERON:0006241,1.73e-12,52;UBERON:0007135,1.73e-12,52;UBERON:0003076,5.34e-12,12;UBERON:0003057,5.34e-12,12;UBERON:0010371,6.98e-12,73;UBERON:0010314,4.88e-09,92;UBERON:0002240,4.30e-08,6;UBERON:0005174,4.30e-08,6;UBERON:0001137,4.30e-08,6;UBERON:0002616,6.18e-08,46;UBERON:0000011,6.76e-08,3;UBERON:0000013,9.11e-08,3;UBERON:0010313,9.11e-08,3;UBERON:0002342,9.11e-08,3;UBERON:0002005,9.11e-08,3;UBERON:0005428,9.11e-08,3;UBERON:0005062,9.11e-08,3;UBERON:0002950,9.49e-08,4;UBERON:0001891,9.49e-08,4;UBERON:0009616,9.49e-08,4;UBERON:0010286,9.49e-08,4;UBERON:0000955,1.09e-07,47;UBERON:0006238,1.09e-07,47;UBERON:0011216,8.81e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,4.44521471421742,3.69038872550742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.18025156380447,2.63623419281366,4.6663175777828,3.91961980551015,11.5002051491977,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,2.39680088414724,3.84218305321555,0.622137673850866,0.270011876663381,1.05162480675691,1.71390590642282,2.20868540951614,0.367472397644862,0.287536413054709,0,3.30347642998166,1.53224805702225,1.99688493233117,0.659431438650969,0.274462930807229,0.52091337055676,3.90856198601933,1.12552522006336,2.90316670775939,1.17851434189467,2.56269025438385,0.372798891650601,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,1.64624189989987,0.753999547978053,4.6967043869531,0.144599356919912,0,0,0,0,0,4.68449275218475,1.8850203613211,0,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.459804208866946,1.44049703844279,0.150704817835715,0.884474488967262,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0,0,0.210289948564127,0.514523061896422,0,0,0.213288250535234,0,0.38660238396628,0,0,0.570676878337677,0,0.494096864172033,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,1.20149420536089,0.885660887877613,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,2.40825884981688,0.820481806145422,0,0.252470927204373,19.2460013843917,19.1314984705353,25.2045375347375,21.7461606136822,25.3990488453929,19.5322806244294,14.1683745586213,24.5494920645502,21.3455400091123,0.321321316421807,0,0,0.162886959353576,0,0,0.728341908464944,0,0,0.590603785761546,0.614870295887855,0,1.45413491791002,1.06949213515416,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.646793418913773,1.28602221018955,0.709360934569094,1.07021290561242,0.987294123612726,1.2178597964584,0.23467170806371,0,0.661585194164886,0,0,0,0,0,0,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.578719832943424,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@LOC100047004,p2@Stk32a | |||
}} |
Revision as of 16:12, 13 September 2013
Short description: | p2@LOC100047004, p2@Stk32a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100047004_5end, CAGE_peak_2_at_Stk32a_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000045477, NM_178749, uc008eue.1, uc012bcj.1_5end |
EntrezGene: | 100047004,269019 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.53e-30 | 43 |
ectodermal cell | 6.55e-29 | 44 |
neurectodermal cell | 6.55e-29 | 44 |
neuron | 5.80e-21 | 33 |
neuronal stem cell | 5.80e-21 | 33 |
neuroblast | 5.80e-21 | 33 |
electrically signaling cell | 5.80e-21 | 33 |
autonomic neuron | 3.01e-20 | 9 |
electrically responsive cell | 6.31e-17 | 39 |
electrically active cell | 6.31e-17 | 39 |
embryonic cell | 1.43e-15 | 70 |
oligodendrocyte precursor cell | 3.62e-12 | 8 |
migratory neural crest cell | 1.69e-09 | 10 |
neuron associated cell | 1.69e-09 | 10 |
glial cell (sensu Vertebrata) | 1.69e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.69e-09 | 10 |
glial cell | 1.69e-09 | 10 |
glioblast | 1.69e-09 | 10 |
glioblast (sensu Vertebrata) | 1.69e-09 | 10 |
oligodendrocyte | 9.11e-09 | 6 |
macroglial cell | 9.11e-09 | 6 |
astrocyte | 9.11e-09 | 6 |
CNS neuron (sensu Vertebrata) | 7.25e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.25e-08 | 23 |
somatic stem cell | 1.60e-07 | 91 |
multi fate stem cell | 1.60e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.