FFCP PHASE1:Mm9::chr8:86716563..86716579,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:86716563..86716579,-|id=chr8:86716563..86716579,-|ontology_enrichment_celltype=CL:0000144!8.24e-09!121;CL:0000012!8.24e-09!121;CL:0002371!5.28e-07!118|ontology_enrichment_celltype_v019_2=CL:0000213,1.12e-10,1;CL:0002078,1.12e-10,1;CL:0000115,1.12e-10,1;CL:0002262,1.12e-10,1;CL:1000398,1.12e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.70e-14,3;DOID:4045,2.70e-14,3;DOID:0050686,1.30e-07,6|ontology_enrichment_uberon=UBERON:0000485!4.22e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.12e-10,1;UBERON:0001281,1.12e-10,1;UBERON:0000353,1.12e-10,1;UBERON:0003497,1.12e-10,1;UBERON:0003909,1.12e-10,1;UBERON:0003928,1.12e-10,1;UBERON:0003835,1.12e-10,1;UBERON:0003513,1.12e-10,1;UBERON:0001280,1.12e-10,1;UBERON:0004647,1.12e-10,1;UBERON:0002294,1.12e-10,1;UBERON:0001173,1.12e-10,1;UBERON:0004912,1.12e-10,1;UBERON:0005171,1.12e-10,1|phase1_expression=0.320297694209588,0,1.36499771816861,0.90739263392049,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,3.1253413780952,2.09409497589519,19.9998705930545,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,1.55759661857696,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.80143534980301,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr8:86716563..86716579,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86716563..86716579,- | |||
|id=chr8:86716563..86716579,- | |||
|ontology_enrichment_celltype=CL:0000144!8.24e-09!121;CL:0000012!8.24e-09!121;CL:0002371!5.28e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.12e-10,1;CL:0002078,1.12e-10,1;CL:0000115,1.12e-10,1;CL:0002262,1.12e-10,1;CL:1000398,1.12e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.70e-14,3;DOID:4045,2.70e-14,3;DOID:0050686,1.30e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!4.22e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.12e-10,1;UBERON:0001281,1.12e-10,1;UBERON:0000353,1.12e-10,1;UBERON:0003497,1.12e-10,1;UBERON:0003909,1.12e-10,1;UBERON:0003928,1.12e-10,1;UBERON:0003835,1.12e-10,1;UBERON:0003513,1.12e-10,1;UBERON:0001280,1.12e-10,1;UBERON:0004647,1.12e-10,1;UBERON:0002294,1.12e-10,1;UBERON:0001173,1.12e-10,1;UBERON:0004912,1.12e-10,1;UBERON:0005171,1.12e-10,1 | |||
|phase1_expression=0.320297694209588,0,1.36499771816861,0.90739263392049,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,3.1253413780952,2.09409497589519,19.9998705930545,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,1.55759661857696,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.80143534980301,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.849892149969277,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr8:86716563..86716579,- | |||
}} |
Revision as of 16:15, 14 September 2013
Short description: | p@chr8:86716563..86716579, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86716563..86716579, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.12e-10 | 1 |
meso-epithelial cell | 1.12e-10 | 1 |
endothelial cell | 1.12e-10 | 1 |
endothelial cell of sinusoid | 1.12e-10 | 1 |
endothelial cell of hepatic sinusoid | 1.12e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.12e-10 | 1 |
hepatic sinusoid | 1.12e-10 | 1 |
parenchyma | 1.12e-10 | 1 |
abdomen blood vessel | 1.12e-10 | 1 |
sinusoid | 1.12e-10 | 1 |
digestive system duct | 1.12e-10 | 1 |
abdominal segment blood vessel | 1.12e-10 | 1 |
trunk blood vessel | 1.12e-10 | 1 |
liver parenchyma | 1.12e-10 | 1 |
liver lobule | 1.12e-10 | 1 |
biliary system | 1.12e-10 | 1 |
biliary tree | 1.12e-10 | 1 |
biliary bud | 1.12e-10 | 1 |
hepatic duct | 1.12e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.70e-14 | 3 |
muscle cancer | 2.70e-14 | 3 |
organ system cancer | 1.30e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.