FFCP PHASE1:Hg19::chr1:35247024..35247046,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4285 | |||
|TSSclassifier=weak | |||
|UniProt=O75712 | |||
|association_with_transcript=234bp_to_ENST00000373366,NM_024009,uc001bxx.2_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_4_at_GJB3_5end | |||
|id=chr1:35247024..35247046,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.85e-41!254;CL:0002076!1.51e-23!43;CL:0000223!1.69e-18!59;CL:0002368!2.12e-12!13;CL:0002251!2.13e-12!21;CL:0002159!6.34e-09!13;CL:0002202!2.44e-08!9;CL:0002632!2.44e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.44e-21;42!CL:0002251;3.71e-16;20!CL:0002368;6.02e-16;13!CL:0002159;2.79e-12;14!CL:0002202;5.94e-10;9!CL:0002632;5.94e-10;9!CL:0000622;4.16e-09;5!CL:0000349;9.06e-09;19!CL:0000244;1.03e-08;4!CL:0000731;1.03e-08;4!CL:0000154;1.71e-07;6!CL:0000307;6.29e-07;3!CL:0002328;7.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.77e-48,253;CL:0002076,1.66e-28,42;CL:0000223,3.38e-24,58;CL:0002251,3.74e-16,20;CL:0002368,5.29e-16,13;CL:0002159,2.90e-12,14;CL:0002202,5.41e-10,9;CL:0002632,5.41e-10,9;CL:0000622,4.50e-09,5;CL:0000349,8.65e-09,19;CL:0000244,1.03e-08,4;CL:0000731,1.03e-08,4;CL:0000154,1.82e-07,6;CL:0000068,6.36e-07,3;CL:0000069,6.36e-07,3;CL:0000307,6.36e-07,3;CL:0000377,6.36e-07,3;CL:0002328,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.60e-13;58!CL:0000377;6.29e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.25e-20!106;DOID:1749!4.77e-12!14;DOID:0050687!6.90e-11!143;DOID:299!2.19e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.99e-15;14!DOID:299;1.30e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.33e-20,106;DOID:1749,1.95e-15,14;DOID:0050687,1.87e-11,143;DOID:299,1.20e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-25!169;UBERON:0000925!1.35e-25!169;UBERON:0006595!1.35e-25!169;UBERON:0001004!3.31e-18!72;UBERON:0001007!1.88e-17!155;UBERON:0001555!1.88e-17!155;UBERON:0007026!1.88e-17!155;UBERON:0000077!1.08e-16!130;UBERON:0000064!2.41e-16!219;UBERON:0000065!2.33e-15!53;UBERON:0004921!1.20e-14!129;UBERON:0004185!1.20e-14!129;UBERON:0000072!8.48e-13!46;UBERON:0001041!2.10e-11!98;UBERON:0008947!5.41e-11!38;UBERON:0003258!5.41e-11!38;UBERON:0000161!5.58e-11!35;UBERON:0005631!4.22e-10!14;UBERON:0000158!4.22e-10!14;UBERON:0001557!1.47e-09!19;UBERON:0000062!3.47e-09!511;UBERON:0001737!4.37e-09!9;UBERON:0005911!3.72e-08!82;UBERON:0001008!4.49e-08!45;UBERON:0000166!6.80e-08!21;UBERON:0003124!1.17e-07!7;UBERON:0006554!1.29e-07!44;UBERON:0000481!1.74e-07!347;UBERON:0005910!2.17e-07!6;UBERON:0000365!3.58e-07!5;UBERON:0007196!4.27e-07!14;UBERON:0001558!4.27e-07!14;UBERON:0000063!5.35e-07!97;UBERON:0000922!9.24e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.95e-13;9!UBERON:0001557;5.95e-13;9!UBERON:0000065;1.41e-12;44!UBERON:0000072;4.54e-12;37!UBERON:0001004;4.37e-11;65!UBERON:0000365;4.76e-10;5!UBERON:0005631;1.35e-09;10!UBERON:0000158;1.35e-09;10!UBERON:0000486;2.43e-09;12!UBERON:0005910;2.93e-08;6!UBERON:0000165;9.13e-08;28!UBERON:0000161;1.62e-07;19!UBERON:0000166;1.62e-07;19!UBERON:0000344;3.87e-07;20!UBERON:0007196;6.77e-07;15!UBERON:0001558;6.77e-07;15!UBERON:0004815;7.73e-07;3!UBERON:0002031;7.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.00e-26,160;UBERON:0000925,3.00e-26,160;UBERON:0006595,3.00e-26,160;UBERON:0001004,1.74e-20,74;UBERON:0000065,1.56e-17,54;UBERON:0001007,2.07e-17,145;UBERON:0001555,2.07e-17,145;UBERON:0007026,2.07e-17,145;UBERON:0001041,4.61e-15,87;UBERON:0004921,8.81e-15,118;UBERON:0000072,1.30e-14,47;UBERON:0008947,5.07e-13,38;UBERON:0003258,5.07e-13,38;UBERON:0001737,6.25e-13,9;UBERON:0005631,6.79e-13,14;UBERON:0000158,6.79e-13,14;UBERON:0001557,1.61e-11,19;UBERON:0000161,8.60e-11,36;UBERON:0006554,2.20e-10,47;UBERON:0001008,4.73e-10,48;UBERON:0000365,4.77e-10,5;UBERON:0000166,6.77e-09,22;UBERON:0003102,1.33e-08,99;UBERON:0003124,2.01e-08,7;UBERON:0005910,2.93e-08,6;UBERON:0005911,6.25e-08,82;UBERON:0000165,2.33e-07,29;UBERON:0000930,2.33e-07,29;UBERON:0005153,2.73e-07,37;UBERON:0000344,4.08e-07,20;UBERON:0007196,6.34e-07,15;UBERON:0001558,6.34e-07,15;UBERON:0005157,6.36e-07,47;UBERON:0004923,6.54e-07,66;UBERON:0004815,7.81e-07,3;UBERON:0002031,7.81e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.94880723801811,10.4670175195864,9.39297900159741,8.96807725976742,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,18.3884244895785,20.1807965581428,19.5969625388397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,32.0579853697437,24.8425576665568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,39.6845587449706,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,17.2002159315334,13.3645599089509,16.6346665325622,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,4.14073800139454,3.70886318171824,2.6511213287183,3.41911315470421,2.39667388501647,6.16903609688851,4.04493924480493,3.33576490713088,3.8474715694639,0,0,0,0,0,2.94848165003288,0,0,0.368965315629341,0,22.8280593649941,14.6122279234905,27.243351523552,20.462046380035,0,0,0,0,0,0,0,0,2.37061319387782,4.29243081047436,0,0,0,17.8094284574876,6.04735661515894,12.1926583628452,24.0912426070662,20.0537417574634,29.5204662957213,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8845267153293,16.6435439510497,7.25736703991233,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8324140994102,22.4677613003587,0,0,0.131124414959424,3.60959690325929,2.84956747286335,1.56869953835371,0,1.37217117560738,0,0,0,0,0.270946437543853,0,5.3524017339458,4.98645605357235,1.11937377361089,0,0,0.256450125116389,0,0,0.309123034943167,0,0,12.0595762979196,14.95138565884,0,0,0,0,0,0,0,0,0,13.5533630596002,14.9908252544783,4.21121951232128,18.9165050199878,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2822014178473,30.8339046746462,19.6003772750381,0.0941438007767792,22.8167847515752,21.9012918367913,29.7098202869573,17.4589784157289,0,0,0,0,0,0,0,0,0,0,7.59624669541198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,11.6984797521468,2.67268212749375,11.9792673818701,0,0.422008249231538,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,6.65025798490219,1.07412704805365,0,0.591860433821602,0,0,0,0,0,0.520855522170466,0,0,4.32415103484899,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0.10893846351899,8.78369588955201,1.61595542857974,0,0,0,0,6.38002319463839,2.38153742844842,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0.123563938946503,0,0,0,0,0,8.41357861407986,1.45668227720456,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,9.89723213885214,5.13649318824375,0.698906672968121,0,1.54810130062536,0.950161122120412,2.29923279748986,13.4814732918903,0,0.677942222341597,0,0,0.0633107959558787,1.36885967914362,0.480952921509202,1.70762395791482,2.39771531498556,1.87317542300338,0,0.343189995723929,2.0167671718341,0.49701014226173,5.89235086541989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.182248669974074,10.7339100031765,0.0788057072991982,0.0524545881349981,0,0,12.8583182204028,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,6.34333520085005,0.106787412567695,0,0,0,0,0,15.9585314442545,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0.617602894321944,0.438568099157414,0.176689145945881,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,7.60723644091057,0,0,0,0,0,15.6665048645778,13.6856997207254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.553258019713743,0,1.42769420259154,2.25739752552359,0.471878893390961,14.1240020861693,7.74021963207266,0,0,0,0,0,0,0,2.12903492763126,3.40068998299204,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0.548257766857182,2.48105589194647,0,1.66091155931474,0,0,0,0,0.532214220975833,0,0,0,0.0657727735628491,1.41832609060762,3.00324785108587,1.25588948560822,0,1.96190514319652,0,0,0,0,0,0,0,0,9.73915971566273,8.1944869005096,4.14755797088455,0,0,0.170426809518315,0,2.52017555398455,0.93061915699296,0,0.559277158988962,3.04265724207253,4.87671699929078,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85686301769052,5.64631794745107,6.09834386837679,0,0,0,0,0.475940431336403,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0,0,1.27940389140589,0.23806443146374,0.129177819672012,0.124149428591716,0.784923038064294,0,0,6.53150243690884,2.39563310759697,7.67813404366298,4.30333232356058,0.99798106963804,5.45401899693529,0.106727345877715,0,3.86248369058324,0,0,0,0.665756774185513,0,0 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|short_description=p4@GJB3 | |||
}} |
Revision as of 17:44, 10 January 2014
Short description: | p4@GJB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GJB3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 234bp_to_ENST00000373366, NM_024009, uc001bxx.2_5end |
EntrezGene: | GJB3 |
HGNC: | 4285 |
UniProt: | O75712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.77e-48 | 253 |
endo-epithelial cell | 1.66e-28 | 42 |
endodermal cell | 3.38e-24 | 58 |
epithelial cell of alimentary canal | 3.74e-16 | 20 |
respiratory epithelial cell | 5.29e-16 | 13 |
general ecto-epithelial cell | 2.90e-12 | 14 |
epithelial cell of tracheobronchial tree | 5.41e-10 | 9 |
epithelial cell of lower respiratory tract | 5.41e-10 | 9 |
acinar cell | 4.50e-09 | 5 |
extraembryonic cell | 8.65e-09 | 19 |
transitional epithelial cell | 1.03e-08 | 4 |
urothelial cell | 1.03e-08 | 4 |
protein secreting cell | 1.82e-07 | 6 |
duct epithelial cell | 6.36e-07 | 3 |
branched duct epithelial cell | 6.36e-07 | 3 |
tracheal epithelial cell | 6.36e-07 | 3 |
tracheoblast | 6.36e-07 | 3 |
bronchial epithelial cell | 7.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.33e-20 | 106 |
squamous cell carcinoma | 1.95e-15 | 14 |
cell type cancer | 1.87e-11 | 143 |
adenocarcinoma | 1.20e-07 | 25 |