FFCP PHASE1:Hg19::chr1:60163336..60163343,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr1:60163336..60163343,+ | |||
|id=chr1:60163336..60163343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.84e-23;19!CL:0002577;1.33e-17;3!CL:0002591;1.25e-13;1!CL:0002537;6.00e-11;5!CL:0000235;3.08e-09;6!CL:0002195;1.87e-07;2!CL:0002571;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.00e-23,19;CL:0002577,9.94e-18,3;CL:0002591,1.42e-13,1;CL:0002537,5.57e-11,5;CL:0000235,3.14e-09,6;CL:0002195,1.64e-07,2;CL:0002571,1.64e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.98e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.41e-10!14;UBERON:0000158!6.41e-10!14;UBERON:0005057!2.17e-08!26;UBERON:0002417!1.97e-07!61;UBERON:0000916!1.97e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.83e-18;24!UBERON:0001389;3.08e-14;1!UBERON:0000026;3.08e-14;1!UBERON:0008784;3.08e-14;1!UBERON:0006058;3.08e-14;1!UBERON:0003663;3.08e-14;1!UBERON:0004256;3.08e-14;1!UBERON:0004708;3.08e-14;1!UBERON:0002101;3.08e-14;1!UBERON:0004709;3.08e-14;1!UBERON:0002529;3.08e-14;1!UBERON:0010538;3.08e-14;1!UBERON:0003661;3.08e-14;1!UBERON:0010890;3.08e-14;1!UBERON:0002471;3.08e-14;1!UBERON:0001383;3.08e-14;1!UBERON:0010758;3.08e-14;1!UBERON:0010707;3.08e-14;1!UBERON:0000978;3.08e-14;1!UBERON:0002103;3.08e-14;1!UBERON:0001665;3.08e-14;1!UBERON:0003823;3.08e-14;1!UBERON:0000154;3.08e-14;1!UBERON:0010709;3.08e-14;1!UBERON:0000989;3.98e-14;1!UBERON:0008811;3.98e-14;1!UBERON:0001987;1.89e-13;4!UBERON:0005631;8.90e-12;10!UBERON:0000158;8.90e-12;10!UBERON:0000305;4.50e-08;7!UBERON:0005090;9.25e-08;2!UBERON:0001630;9.25e-08;2!UBERON:0000341;1.32e-07;2!UBERON:0000078;1.87e-07;2!UBERON:0002012;1.87e-07;2!UBERON:0008886;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.76e-22,14;UBERON:0000158,3.76e-22,14;UBERON:0000478,2.92e-18,24;UBERON:0003124,1.51e-16,7;UBERON:0005418,3.08e-14,1;UBERON:0001389,3.08e-14,1;UBERON:0000026,3.08e-14,1;UBERON:0008784,3.08e-14,1;UBERON:0006058,3.08e-14,1;UBERON:0003663,3.08e-14,1;UBERON:0004256,3.08e-14,1;UBERON:0004708,3.08e-14,1;UBERON:0002101,3.08e-14,1;UBERON:0004709,3.08e-14,1;UBERON:0002529,3.08e-14,1;UBERON:0010538,3.08e-14,1;UBERON:0003661,3.08e-14,1;UBERON:0010890,3.08e-14,1;UBERON:0002471,3.08e-14,1;UBERON:0001383,3.08e-14,1;UBERON:0004357,3.08e-14,1;UBERON:0004347,3.08e-14,1;UBERON:0005420,3.08e-14,1;UBERON:0005732,3.08e-14,1;UBERON:0010758,3.08e-14,1;UBERON:0010707,3.08e-14,1;UBERON:0000978,3.08e-14,1;UBERON:0002103,3.08e-14,1;UBERON:0001665,3.08e-14,1;UBERON:0003823,3.08e-14,1;UBERON:0000154,3.08e-14,1;UBERON:0010709,3.08e-14,1;UBERON:0005733,3.08e-14,1;UBERON:0005730,3.08e-14,1;UBERON:0000989,3.98e-14,1;UBERON:0008811,3.98e-14,1;UBERON:0006258,3.98e-14,1;UBERON:0005876,3.98e-14,1;UBERON:0004874,3.98e-14,1;UBERON:0001987,1.52e-13,4;UBERON:0004340,1.52e-13,4;UBERON:0000305,4.27e-08,7;UBERON:0005090,9.25e-08,2;UBERON:0001630,9.25e-08,2;UBERON:0000341,1.28e-07,2;UBERON:0000078,1.99e-07,2;UBERON:0007497,1.99e-07,2;UBERON:0003643,1.99e-07,2;UBERON:0003504,1.99e-07,2;UBERON:0003469,1.99e-07,2;UBERON:0003496,1.99e-07,2;UBERON:0002012,1.99e-07,2;UBERON:0008886,1.99e-07,2;UBERON:0007303,1.99e-07,2;UBERON:0002061,1.99e-07,2;UBERON:0005432,1.99e-07,2;UBERON:0004363,1.99e-07,2;UBERON:0004871,3.45e-07,8 | |||
|phase1_expression=0,0,0.845726424575827,0,1.78784437770915,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.806016785821122,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,1.08524321078289,0,0,1.77695974371273,0,0.301439377059586,0,0,1.2162378064119,2.51128545716063,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,1.81876542867756,0,3.32629322662648,0,0,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.712256285173899,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0.949138274156178,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.766021480529467,0,0.324621940274555,0,0.228234679033192,0.47003968731907,0,0.50787533340481,0.1605880751037,0,0,0.343505344755765,0.921722292925374,0.671028323677248,0.500547425135725,0.586164286206121,0,0,0,0,0,0,0.879049075631364,0,0,0,0.95497793895076,3.56357616999166,1.53580351049616,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.576911008668165,0.876246070104404,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0.466311601748341,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0.963099152036517,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96211178389294,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.235479278551542,0,0,0,1.07963795609311,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.30114790657,7.39172209364979,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,2.77204176471275,0.714193294391221,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:60163336..60163343,+ | |||
}} |
Revision as of 18:44, 10 January 2014
Short description: | p@chr1:60163336..60163343, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:60163336..60163343, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.00e-23 | 19 |
placental epithelial cell | 9.94e-18 | 3 |
smooth muscle cell of the pulmonary artery | 1.42e-13 | 1 |
amnion mesenchymal stem cell | 5.57e-11 | 5 |
macrophage | 3.14e-09 | 6 |
hepatic stem cell | 1.64e-07 | 2 |
hepatic mesenchymal stem cell | 1.64e-07 | 2 |