FFCP PHASE1:Hg19::chr1:65886262..65886271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29477 | |||
|TSSclassifier=strong | |||
|UniProt=O15243 | |||
|association_with_transcript=0bp_to_ENST00000371065,ENST00000475108_5end | |||
|description=CAGE_peak_2_at_LEPROT_5end | |||
|id=chr1:65886262..65886271,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.18e-07!42;CL:1000449!3.86e-07!16;CL:1000497!9.33e-07!18;CL:0002518!9.33e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.95e-10;15!CL:0002681;5.65e-09;12!CL:0002584;5.65e-09;12!CL:0000860;8.67e-09;33!CL:0002057;8.67e-09;33!CL:1000507;1.16e-08;10!CL:1000494;1.16e-08;10!CL:1000497;1.64e-08;17!CL:0002518;1.64e-08;17!CL:0000473;1.95e-07;39!CL:0000234;1.95e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.55e-10,15;CL:0002681,4.76e-09,12;CL:0002584,4.76e-09,12;CL:1000507,5.41e-09,10;CL:1000494,5.41e-09,10;CL:1000497,9.45e-09,17;CL:0002518,9.45e-09,17;CL:0000860,3.01e-08,42;CL:0002057,3.01e-08,42;CL:0000473,1.10e-07,48;CL:0000234,1.10e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.69e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.79e-08!659;UBERON:0004211!3.86e-07!16;UBERON:0001285!3.86e-07!16;UBERON:0007684!3.86e-07!16;UBERON:0003220!3.86e-07!16;UBERON:0004208!3.86e-07!16;UBERON:0006555!8.23e-07!17;UBERON:0005103!8.23e-07!17;UBERON:0000083!8.23e-07!17;UBERON:0009201!8.23e-07!17;UBERON:0004819!8.23e-07!17;UBERON:0006553!8.23e-07!17;UBERON:0003074!8.23e-07!17;UBERON:0003060!8.23e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.95e-10;15!UBERON:0004819;2.95e-10;15!UBERON:0001285;2.95e-10;15!UBERON:0007684;2.95e-10;15!UBERON:0001225;5.65e-09;12!UBERON:0008987;5.65e-09;12!UBERON:0001851;6.91e-09;15!UBERON:0004211;1.16e-08;10!UBERON:0009773;1.16e-08;10!UBERON:0001231;1.16e-08;10!UBERON:0004810;1.16e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.55e-10,15;UBERON:0009773,1.55e-10,15;UBERON:0001231,1.55e-10,15;UBERON:0001285,1.55e-10,15;UBERON:0007684,1.55e-10,15;UBERON:0004208,1.55e-10,15;UBERON:0006555,1.39e-09,16;UBERON:0004819,1.39e-09,16;UBERON:0001225,4.76e-09,12;UBERON:0008987,4.76e-09,12;UBERON:0004810,5.41e-09,10;UBERON:0001851,7.66e-09,15 | |||
|phase1_expression=0.363356758541113,1.71280419112787,1.40954404095971,2.00146596706261,2.23480547213644,0.872338524100369,2.53299878168311,1.26343974685366,2.35067065379855,0,0.697801167972428,1.09220686065086,0.791300934685361,1.48519623552056,3.64537113300707,0,0,1.46062018077475,0.975865597581014,0.861847406537515,2.44800829493104,0.313454721478088,1.43117993565528,1.36874425072884,2.00868223351684,0,0.0821005894499457,0.0787107813136792,3.54027849164014,0.767658796194425,2.63187409637329,0,0.30120591877825,0,0.0774672005803016,0,1.76160263600908,1.10799081706375,1.40381113229099,2.17010870715852,0,0.32389366601898,0.257575567634187,2.76256653681173,2.26725566213286,1.4555043671269,4.41615170120801,2.46700732813095,2.47765096716083,4.31538588483226,1.2808035326455,0.945928919554341,3.44745680736619,3.87290810150296,0,3.57660445130949,1.09162460023138,1.34834090667051,8.57034898638527,1.92557416245656,0.639337125799041,1.31940520074686,0.797854630486527,0.426224750532694,4.64334781805734,1.13477044938228,0.622822248995575,3.76872997885115,3.12889751052121,1.73751075764093,5.44859552370032,0.368277635987565,0.949387162322653,0,0.425208599930087,0.628975936525128,0.22465726229299,0.450530678524519,0.32145117339416,0.285012743741249,0.59675003159727,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,0,0,1.32171328579026,0,1.84368859342554,0.393419540227666,0,0.205601498999509,0.334372990781356,1.30368906653436,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.390178042679635,0.164437904603676,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0,0,0.670700859703636,1.66221330396589,2.89151321907653,0.50133791063589,1.15877215168659,0.795285947051099,0.973269740605272,1.41802225746102,1.10864698731282,2.0202000709419,0.851363990735132,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,1.25396979922086,1.8089173141853,2.84613010149368,0,0.805658634218294,3.80136052859256,0.488124115096339,1.10298924103761,0,0.535798369704479,1.34717623575702,1.68917220724983,3.06633274931766,0,1.09921046358244,2.63560834872127,0,0,0,0.12663051166458,0.926864265692532,0.860509862246441,0,0,0,0.98667019366864,1.55605517699883,2.55950276932407,2.12500474047496,0.756787138224657,1.72852777344,0.468642863667593,1.24864030732128,0.570471821544449,0.298897361103602,0.704606991862589,0,0.842704840213491,0.816616685019573,0.859840221182376,0.413303124703062,1.18800285728205,1.97813543422845,0,0,0.841680569770331,0.750711119231785,1.6623846929051,0.438977620880838,0.919463387397059,1.95309476578576,0.794025282120147,0.717558542755448,1.70845911054854,0.635795703478686,0,0.618315175430633,1.28820270022815,0.558350568994769,0.168776332241266,0.876933046450788,0.757301322732344,0.736399189138395,0.323292113637624,0.355009592516614,1.0075209822764,0.847802961552438,1.15956511897978,0.818238361772504,2.00763216772303,0.487894824518382,0.132529768321485,0.348581828608555,0.518305275076852,0.504641701751257,1.09493207722749,3.12899064659632,0.643240938192885,0,3.25057549622385,2.88751792667834,0.591534000199219,0.842923450390509,0.723033089650446,0.330881918197182,0.435758888184812,0.474541238222193,0.674156540800822,0.392442930250692,0,0.738155454624648,0,0.8231480226628,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,1.54411029268673,0.219500570817251,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,1.27523445472584,1.76113041353732,2.45422961193825,0.925971025153221,2.28304982681518,1.58040879591855,0,0.984868024349589,2.10603838625314,0.594524649154913,0.93733833986777,0.839910640994298,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0.492663237895943,0.704387472105808,0.621984346622316,1.15295962733569,0.88369703398466,0.761974731506028,0,0,0,0.205654985406647,1.20137223137567,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0.775630294546667,0,1.690605505112,0.797814349754612,1.04007436911366,0.771622122786426,0,0.266422179016099,0.285955987316295,0.542621605391443,1.64648067356154,0,0,0.791951872933429,1.80863626235752,2.61460037580088,0.799783929456456,1.2162378064119,0.502257091432126,0,0.958499421966331,1.14861935834114,1.42636905040718,0.723906533337896,1.43833425785268,1.61154866915906,0.336255431980582,0,0.215627574859517,0.513372145118994,0.254094624222463,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,1.24324654030811,2.08575535922538,3.00102312635806,3.7977103317963,1.45579603071565,0.892144943985809,1.10391690523754,1.17141414992713,0.300946099727719,6.82222512167955,0,2.65690239414175,0.553107505625109,0.955719759148911,0.195801157462741,1.37257369524342,0.413536052245775,0.647142602455851,0.533637789017222,0.606255142892519,0,0.60478058665936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| |||
|short_description=p2@LEPROT | |||
}} |
Revision as of 18:54, 10 January 2014
Short description: | p2@LEPROT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LEPROT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371065, ENST00000475108_5end |
EntrezGene: | LEPROT |
HGNC: | 29477 |
UniProt: | O15243 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.55e-10 | 15 |
kidney cortical cell | 4.76e-09 | 12 |
renal cortical epithelial cell | 4.76e-09 | 12 |
kidney tubule cell | 5.41e-09 | 10 |
nephron tubule epithelial cell | 5.41e-09 | 10 |
kidney cell | 9.45e-09 | 17 |
kidney epithelial cell | 9.45e-09 | 17 |
classical monocyte | 3.01e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-08 | 42 |
defensive cell | 1.10e-07 | 48 |
phagocyte | 1.10e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.55e-10 | 15 |
renal tubule | 1.55e-10 | 15 |
nephron tubule | 1.55e-10 | 15 |
nephron | 1.55e-10 | 15 |
uriniferous tubule | 1.55e-10 | 15 |
nephrogenic mesenchyme | 1.55e-10 | 15 |
excretory tube | 1.39e-09 | 16 |
kidney epithelium | 1.39e-09 | 16 |
cortex of kidney | 4.76e-09 | 12 |
renal parenchyma | 4.76e-09 | 12 |
nephron tubule epithelium | 5.41e-09 | 10 |
cortex | 7.66e-09 | 15 |